Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j24f
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   2.6  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   2.6  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   8.1  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 198 ARTQPANKMAATELGRYKNIVTALITGNYVSLI 100
           A T PA   A   LG Y N +  ++  + VS I
Sbjct: 264 AETMPATSDAVPLLGTYFNCIMFMVASSVVSTI 296


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 198 ARTQPANKMAATELGRYKNIVTALITGNYVSLI 100
           A T PA   A   LG Y N +  ++  + VS I
Sbjct: 296 AETMPATSDAVPLLGTYFNCIMFMVASSVVSTI 328


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 632 CGSPAPCVFARIHRRPGW 579
           CGS  P ++ ++H    W
Sbjct: 356 CGSSTPAIYTKVHPYLDW 373


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,201
Number of Sequences: 2352
Number of extensions: 11752
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)