Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j22f
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 58 4e-09
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 58 8e-09
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 57 1e-08
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 56 2e-08
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 54 9e-08
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 53 2e-07
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 49 4e-06
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 46 2e-05
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 46 3e-05
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 44 1e-04
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 42 5e-04
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 41 7e-04
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 41 0.001
SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017) 38 0.005
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 37 0.015
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_14258| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 31 1.0
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13) 30 1.8
SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_45817| Best HMM Match : Ank (HMM E-Value=0) 29 4.1
SB_37524| Best HMM Match : p450 (HMM E-Value=0) 29 4.1
SB_43699| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_17620| Best HMM Match : CRAL_TRIO (HMM E-Value=9.2) 28 5.4
SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_15933| Best HMM Match : 7tm_1 (HMM E-Value=0.02) 28 7.1
SB_57471| Best HMM Match : TatC (HMM E-Value=0.27) 28 7.1
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_9376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_58773| Best HMM Match : DUF834 (HMM E-Value=0.83) 27 9.4
SB_43241| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 27 9.4
SB_47747| Best HMM Match : PMC2NT (HMM E-Value=6.3) 27 9.4
SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0) 27 9.4
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 58.4 bits (135), Expect = 4e-09
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Frame = +1
Query: 166 AIQSTRFSGKVAIVTASTEGIGYAIAKRLGSEGASVVI-----CSRKESNVGKAVQSLRS 330
A + RF G+V +VT + G+G A GASVV+ ++ E G+A +
Sbjct: 2 AAEPIRFDGRVVLVTGAGNGLGRQYALAFAERGASVVVNDLGGDTKGEGKSGRAADKVVQ 61
Query: 331 EGITVEG--VVCHVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDK 504
E I +G V + E ++ E A FG +D++ IL E WD
Sbjct: 62 E-IRAKGGKAVADYNSVEQGDQVVETAIKAFGRIDVV-VNNAGILRDKSILRMSELDWDL 119
Query: 505 IFDVNVKSSWLLAKEAYPELVKRGGGSIVFISS 603
+ V++K S+L+ + A+P + K+ G I+ +S
Sbjct: 120 VQRVHLKGSFLVTRAAWPHMKKQKFGRIIMTTS 152
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 57.6 bits (133), Expect = 8e-09
Identities = 43/144 (29%), Positives = 71/144 (49%)
Frame = +1
Query: 181 RFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVC 360
R KV +++A+ +GIG A A EGA V+ + N K + GI E V
Sbjct: 13 RLKNKVVVLSAAAQGIGKATALACAREGAKVIAT---DINAEKLKELHSVPGI--ETRVV 67
Query: 361 HVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLL 540
V ++E ++ S+ VD+L I + E+ WD D+NVKS + +
Sbjct: 68 DVTDYEAIKKF----ASEVDRVDVLFNCAGLVLGGN-IEECSEKQWDLTMDLNVKSMFRM 122
Query: 541 AKEAYPELVKRGGGSIVFISSIAA 612
KE P++ ++G GSI+ ++S+A+
Sbjct: 123 TKECIPKMRQQGSGSIINMASVAS 146
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 57.6 bits (133), Expect = 8e-09
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Frame = +1
Query: 97 TKRSVVLLINKSLNMSTSANPVRAIQSTR-FSGKVAIVTASTEGIGYAIAKRLGSEGASV 273
T ++ I +N + P R+I+ R G+VAIVT ++ GIG A+AK L G V
Sbjct: 72 TSELLMSYIKSLVNQAVLPPPKRSIRGPRPLEGQVAIVTGASSGIGAAVAKALAEAGVKV 131
Query: 274 VICSRKESNVGKAVQSLRSEGITVEGVVCHVANHEHRRRLFEVATSKFGGVDILXXXXXX 453
+ +R+E + + + + G V V E L + S G VDIL
Sbjct: 132 ALAARREERLTQLRDEIIANGDVAISVKTDVTIKEQMESLVKRTDSTLGPVDIL-VSCAG 190
Query: 454 XXXXXXILDTDEQVWDKIFDVNVKS 528
+ + + W+++ D+N K+
Sbjct: 191 VMYYQMMKNCAMKDWEQMVDINCKA 215
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/138 (23%), Positives = 61/138 (44%)
Frame = +1
Query: 190 GKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVA 369
GK+ +T + G+G A+ K S+G +VV C R + + + + +G + V +
Sbjct: 2 GKIVAITGVSTGLGLALTKWFSSQGHTVVGCGRSAAKIAEMNEKYCGKGKPNQFYVVDIT 61
Query: 370 NHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKE 549
+ + FG D + + + + +DK+ DVN+K S + +
Sbjct: 62 DDSVVKEWATNVCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSANVIRS 121
Query: 550 AYPELVKRGGGSIVFISS 603
P+++K G G IV SS
Sbjct: 122 FLPKMIKAGKGVIVNFSS 139
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 56.0 bits (129), Expect = 2e-08
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Frame = +1
Query: 193 KVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKA-VQSLRSEGITVEGVVCHVA 369
KV ++T ++ GIG A A+ ++G ++ + +++ +A V + G V VA
Sbjct: 8 KVMLITGASRGIGAATARLAAAQGYALCLNYQRQQAAAEALVSEITQAGGRAIAVQADVA 67
Query: 370 NHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKE 549
+ +LF FG +D+L + + W ++F NV S+L +E
Sbjct: 68 DERQVMQLFARLDQHFGRLDVLVNNAGILETQMRLEQMELARWQRVFATNVFGSFLCCRE 127
Query: 550 AYPELVKR---GGGSIVFISSIAA 612
A + R GG+IV +SS AA
Sbjct: 128 AIKRMSTRQGGNGGAIVNLSSAAA 151
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 54.0 bits (124), Expect = 9e-08
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Frame = +1
Query: 172 QSTRFSGKVAIVTASTEGIGYAIAKRLGSEGASVVI-CSRKESNVGKAVQ---SLRSEGI 339
Q T + VA+VT + + +G I + L G VVI + + K VQ S+RS+
Sbjct: 6 QITPSNQHVALVTGAAKRLGAGIVRALHGSGFRVVIHYNNSGEDAEKIVQEMNSVRSDSA 65
Query: 340 TVEGVVCHVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVN 519
+ E R+L E + FG +D+L E+ W+K+ VN
Sbjct: 66 IMLKADLSTNIQETARKLIEDTVTAFGQLDLLVNNASQFCPTESG-SVQEETWNKLMGVN 124
Query: 520 VKSSWLLAKEAYPELVKRGGGSIVFISSIAAYQP 621
+ + L++ A+P L KR GSI+ + I A +P
Sbjct: 125 LSFPFFLSQAAFPHL-KRSHGSIINMIDIHAERP 157
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 53.2 bits (122), Expect = 2e-07
Identities = 48/160 (30%), Positives = 66/160 (41%), Gaps = 22/160 (13%)
Frame = +1
Query: 184 FSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLR-----SEGITVE 348
F GKVAIVT GIG AIA L S G+ VVI SR E + KA L S V+
Sbjct: 14 FDGKVAIVTGGGTGIGKAIAAELLSLGSKVVIASRSEGKLQKAAVDLEKFIPPSSSAEVK 73
Query: 349 GVVCHVANHEHRRRLFEVA-----------------TSKFGGVDILXXXXXXXXXXXXIL 477
+ C++ L E + S +G +D L +
Sbjct: 74 VIPCNIRKESQVTNLMESSMSSYYFSLKVTNLMKSTLSSYGRIDYL-VNNGGGQFLCPVS 132
Query: 478 DTDEQVWDKIFDVNVKSSWLLAKEAYPELVKRGGGSIVFI 597
+ + W+ + D N+ ++L EAY + GGSIV I
Sbjct: 133 NMSYKGWNAVIDTNLNGTFLCCTEAYRLWMSEHGGSIVNI 172
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 160 VRAIQSTRFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQS-LRSEG 336
+RA RF G+VAIVT GIG A +RL EGASV I + +G+ V++ LRS G
Sbjct: 14 IRAHLEGRFHGRVAIVTGGASGIGKATVERLAREGASVAILDIND-ELGQQVETDLRSSG 72
Query: 337 ITVEGVVCHVANHE 378
V+ VAN +
Sbjct: 73 NKVKFYHVDVANKD 86
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 48.8 bits (111), Expect = 4e-06
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 7/150 (4%)
Frame = +1
Query: 181 RFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVV- 357
+ G VAIVT +GIG AI+K L V + E G L SE + V+
Sbjct: 2 KIEGTVAIVTGGVQGIGLAISKALLDRDGKVCMLDINE-KTGNETLKLLSENYSKHRVLF 60
Query: 358 --CHVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKS- 528
C V + F+ FG +DIL +L + W I D+NVK
Sbjct: 61 IKCDVTSQPQMEAAFQRTKDVFGRLDILCNNAGIAVRENDLLRSG--AWKTIIDINVKGV 118
Query: 529 --SWLLAKEAYPELVKRG-GGSIVFISSIA 609
LL + +G GG+IV ++S+A
Sbjct: 119 ILGTLLGLDHMGVSGAKGHGGTIVNVASLA 148
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/138 (20%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Frame = +1
Query: 193 KVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVAN 372
+V ++T + G+G A+ K + G +V+ C+R + K + S + V ++N
Sbjct: 8 EVVVITGVSYGLGLAMVKWFNANGHTVIGCARSHDKIEKINEEFASGKEKRQFYVVDISN 67
Query: 373 HEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSWLLAKEA 552
E ++ + FG +L + + ++K+ D+N+K + + +
Sbjct: 68 DEAVKQWSQQVMLDFGAPSLLINNSGVTNKNANFWEVPTEEFNKVVDINIKGTANVLRHF 127
Query: 553 YPELV--KRGGGSIVFIS 600
P ++ KR G + F S
Sbjct: 128 LPSMIEAKRKGVIVNFTS 145
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 45.6 bits (103), Expect = 3e-05
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 2/143 (1%)
Frame = +1
Query: 181 RFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVC 360
R GK I+T +T GIG A L GA V+I +R AV+ +++ + + V
Sbjct: 34 RLDGKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNAAVRDIQASSGSQQVFVE 93
Query: 361 H--VANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSW 534
H +A+ R+ EV K VDIL E ++ +F VN S +
Sbjct: 94 HLDLASLSSVRKFAEVINKKEERVDILMNNAGVAWIP---FKRTEDGFEMMFGVNHLSHF 150
Query: 535 LLAKEAYPELVKRGGGSIVFISS 603
LL +L + I+ +SS
Sbjct: 151 LLTNLLLDKLKRSAPSRIINVSS 173
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 44.0 bits (99), Expect = 1e-04
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 2/143 (1%)
Frame = +1
Query: 181 RFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVC 360
R GK I+T +T GIG A L GA V+I +R AV+ ++S + + V
Sbjct: 34 RLDGKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNTAVRDIQSRSGSQQVFVE 93
Query: 361 H--VANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVKSSW 534
H +A+ R+ EV +K + IL E ++ IF VN S +
Sbjct: 94 HLDLASLSSVRKFAEVMNNKEERIHILINNAGVGFIP---FRRTEDGFEMIFAVNHLSHF 150
Query: 535 LLAKEAYPELVKRGGGSIVFISS 603
LL +L + I+ +SS
Sbjct: 151 LLINLLLEKLKRSAPSRIINVSS 173
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1
Query: 292 ESNVGKAVQSLRSEGITVEGVVCHVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXX 471
E + + S G+ E V + N E + G +D+L
Sbjct: 73 EEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNAGAMTKAP- 131
Query: 472 ILDTDEQVWDKIFDVNVKSSWLLAKEAYPELVKRG-GGSIVFISSIAAYQP 621
LD W KIF V+V ++L ++ A ++VK+G GG I+ I+S+ + P
Sbjct: 132 FLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTP 182
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 41.1 bits (92), Expect = 7e-04
Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 10/150 (6%)
Frame = +1
Query: 190 GKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQ---SLRSEGIT------ 342
G+V +T ++ GIG +A L G +V+ +R+ S + + + ++ E T
Sbjct: 42 GRVCWITGASSGIGENLAYELAKFGCKLVLSARRRSELERVKEQCIAIAKEANTSYNADQ 101
Query: 343 -VEGVVCHVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVN 519
+ + V ++ L F +DIL + +V + D+N
Sbjct: 102 DILVLPMDVTEYDKHTELVRSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLDLN 161
Query: 520 VKSSWLLAKEAYPELVKRGGGSIVFISSIA 609
+ L K P +++R G IV SS+A
Sbjct: 162 FLAVVSLTKAVLPHMIERKNGHIVVTSSVA 191
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = +1
Query: 163 RAIQSTRFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGIT 342
R + R GK IVT + GIG A A L GA V++ R + KA +R +
Sbjct: 59 RCTNTVRLHGKTVIVTGANSGIGKATALELARRGARVIMACRDLESAEKAASEIRYKVPK 118
Query: 343 VEGVVC 360
E VVC
Sbjct: 119 AE-VVC 123
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 190 GKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGV--VCH 363
G++A+VT GIG A+ + L + GASV + + ++L + T +
Sbjct: 193 GRLALVTGGGSGIGRAVCEALANRGASVSVIDLHGVGAKETSENLATHNDTTRHTHFAVN 252
Query: 364 VANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQVWDKIFDVNVK 525
VA+ + L + ++ + +L EQ +D + DVN+K
Sbjct: 253 VASSSEVKDLLQAIHKEYQRAPCILVNSAGIAKDALLLKMKEQDFDDVIDVNLK 306
>SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 121 INKSLNMSTSANPVRAIQSTRFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESN 300
IN S S+ ++ G+V +VT ++ GIG A A L + GA VV+ R
Sbjct: 22 INISQKYDASSTTYDVLKDENLDGRVVMVTGASSGIGLATASALAAHGAHVVMACRDMEK 81
Query: 301 VGKA 312
KA
Sbjct: 82 AHKA 85
>SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 121 INKSLNMSTSANPVRAIQSTRFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESN 300
IN S S+ ++ G+V +VT ++ GIG A A L + GA VV+ R
Sbjct: 70 INISQKYDASSTTYDVLKDENLDGRVVMVTGASSGIGLATASALAAHGAHVVMACRDMEK 129
Query: 301 VGKA 312
KA
Sbjct: 130 AHKA 133
>SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017)
Length = 453
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 157 PVRAIQSTRFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRK-ESNVGK 309
P + SGKV +VT ++ GIG IA LG GA+V + R +S GK
Sbjct: 41 PAKMPDLPSLSGKVCLVTGASRGIGKGIALMLGKAGATVYVTGRTLQSATGK 92
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 36.7 bits (81), Expect = 0.015
Identities = 37/145 (25%), Positives = 66/145 (45%)
Frame = -2
Query: 623 VG*YAAIEDMNTILPPPLLTSSGYASLANSQELFTLTSNILSQTCSSVSKIEATAGLTAA 444
+G I ++++ILP P G S+ ++ T T + S T SSV I T +T
Sbjct: 392 IGKSTTIANVSSILPSPSTVYMGTTSVPDNYTEVTTTHDAASSTTSSVPDIYMTLSITTG 451
Query: 443 FDTRISTPPNLLVATSNNRLLCS*LAT*QTTPSTVMPSLRRLCTAFPTLLSFRLQMTTEA 264
T +S+P + + ++ ++T T STV S + TL + + +T+ A
Sbjct: 452 VYTSLSSPGLKNTTFTPSEIVSPSISTLHT--STVELSSTGNVSML-TLKTNSIPVTSPA 508
Query: 263 PSLPSLLAIAYPIPSVDAVTIATFP 189
PS + L + +P + ++A P
Sbjct: 509 PS--TSLPASSTLPVLPTSSLAETP 531
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 35.5 bits (78), Expect = 0.036
Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 8/162 (4%)
Frame = +1
Query: 145 TSANPVRAIQSTRFSG----KVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKA 312
++ N + +Q+ F+ +V +VT + GIG A+A L + N+GK
Sbjct: 15 STTNSPQTVQAEEFTEDKFQRVVVVTGCSSGIGLALAVLLSHDADKRFKVYATMRNLGKK 74
Query: 313 VQSLRSEGITVEGVV----CHVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILD 480
L VE ++ V + E + + K G +D+L
Sbjct: 75 DALLEKCSGVVEDLLNIKELDVCSDESVKAVVAEIVEKEGRIDVLVNNAGIGLFCVPECA 134
Query: 481 TDEQVWDKIFDVNVKSSWLLAKEAYPELVKRGGGSIVFISSI 606
T + + +K+F+ NV + P + K+ G +V I S+
Sbjct: 135 TTDAI-NKVFEPNVYGLMRMTNAVIPHMKKQRAGHVVNIGSV 175
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 35.5 bits (78), Expect = 0.036
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +1
Query: 181 RFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSR 288
+ +GK +T ++ GIG AIA ++ +GA+VVI ++
Sbjct: 2 KLAGKTVFITGASRGIGKAIAVKVARDGANVVIAAK 37
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 34.7 bits (76), Expect = 0.062
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 196 VAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVANH 375
+A VT GIGY + ++L + +I + + G+A + G VE V ++
Sbjct: 25 MAEVTGGNRGIGYCVVQQLVQQFDGNIILTARSDEQGEAACRSLNVGGRVEYHKLDVTSN 84
Query: 376 EHRRRLFEVATSKFGGVDIL 435
+ L K+GG+DIL
Sbjct: 85 DSIHELTLHVQEKYGGLDIL 104
>SB_14258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 154 NPVRAIQSTRFSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNVGK 309
NP A+Q GKVA +T ++ GIG +A +L G +V+ +R++ + +
Sbjct: 44 NPTSAMQ-----GKVAWITGASSGIGEFLAYQLAGNGCKLVLSARRKQELDR 90
>SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 184 FSGKVAIVTASTEGIGYAIAKRLGSEGASVVICSRKESNV 303
F+GKV +T ++ GIG +A G+ +V+ +R+E +
Sbjct: 868 FNGKVVWITGASSGIGEHLAYEFTKHGSKLVLSARREKRL 907
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 181 RFSGKVAIVTASTEGIGYAIAKRLGSEGASVVI-CSRKESNVGKAVQSLRSEG-ITVEGV 354
+ GK I+T + GIG +A+ L A V++ C + A + ++S G + VE
Sbjct: 69 KLKGKTVIITGANSGIGMEVARDLAWRKARVIMACRDVHKGMKAAAEIVQSAGNMDVEVK 128
Query: 355 VCHVANHEHRRRLFEVATSKFGGVDIL 435
+A+ R + + VD+L
Sbjct: 129 KLDLASFASIREFAKEVNEEESRVDVL 155
>SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 175 STRFSGKVAIVTASTEGIGYAIAKRLGSEGASV 273
S R++GKV IVT ++GIG + + + S+
Sbjct: 7 SGRYAGKVTIVTGGSKGIGEGVVREFDPDATSI 39
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 30.7 bits (66), Expect = 1.0
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Frame = +1
Query: 193 KVAIVTASTEGIGYAIAKRLGSEGAS---VVICSR---KESNVGKAVQSLRSEGITVEGV 354
KVA++T + GIG A A L +G V R K+ ++ A Q+ + + + +
Sbjct: 4 KVAVITGCSSGIGLATASILAKDGEKRFRVYATMRNLDKKGSLESACQNALGDTLFIREL 63
Query: 355 VCHVANHEHRRRLFEVATSKFGGVDILXXXXXXXXXXXXILDTDEQ-VWDKIFDVNVKSS 531
V++ + + G +DIL +L+T Q + + F+ N
Sbjct: 64 --DVSSDDSVEEALNAIYEEEGRIDIL--VNNAGISHIGMLETQTQSLVKETFNTNFFGV 119
Query: 532 WLLAKEAYPELVKRGGGSIVFISSIAAY 615
++K P + G I+ ISS A +
Sbjct: 120 LRMSKAVIPRMKSDHSGHIINISSTAGH 147
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 30.7 bits (66), Expect = 1.0
Identities = 29/92 (31%), Positives = 42/92 (45%)
Frame = -2
Query: 560 SGYASLANSQELFTLTSNILSQTCSSVSKIEATAGLTAAFDTRISTPPNLLVATSNNRLL 381
S Y + A + T+ +S T + + +T G TAA R+ TP L S +
Sbjct: 808 STYGTTAAPMDTDGRTATPMS-TDGTTTAASSTDGTTAAPFIRVKTPSQLNGTVSPLQSS 866
Query: 380 CS*LAT*QTTPSTVMPSLRRLCTAFPTLLSFR 285
S +++ +TTPSTV R T FP S R
Sbjct: 867 PSTVSSVETTPSTVSTKPR---TIFPVAASSR 895
>SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13)
Length = 1027
Score = 29.9 bits (64), Expect = 1.8
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Frame = -2
Query: 494 TCSSVSKIEATAGLTAAFDTRISTPPNLLVATSNNRLLCS*LAT*QTTPSTVMPSLRRLC 315
T ++ + T AA T ++T L + + A TT +T +L +
Sbjct: 619 TVTTAAATLTTVTTAAATLTTVTTAAATLTTVTTAAATLTTAAATVTTVTTAAATLTTVT 678
Query: 314 TAFPTLLSFRLQ---MTTEAPSLPSLLAIAYPIPSVDAVTIATF 192
TA TL + + +TT A +L ++ A + + A T ATF
Sbjct: 679 TAAATLTTVTIAAATLTTAAATLTTVTTAAATVTTAAATTTATF 722
>SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 29.1 bits (62), Expect = 3.1
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Frame = -2
Query: 569 LTSSGYASLANSQELFTLTSNILSQTCSSVSKIEATAGLTAAFDTRISTPPNLLVATSNN 390
++ +G + A S++ F SNI T + K +G T A IS L ++
Sbjct: 145 ISETGLRTSATSRKTF---SNI-RPTSETSRKTSGNSGTTTAVSLTISVSSRKLPTSTRT 200
Query: 389 RLLCS*LAT*QTTPSTVMPSLRRLCTA--FPTLL--SFRLQMTTEAPSLPSLLAIAYP 228
+ S + PS MP+ RL T+ TLL + RL T PS YP
Sbjct: 201 YIKSSEASRSSLIPSRTMPT-NRLTTSNMLSTLLTTTARLDEPTRMPSTTKATTKRYP 257
>SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 415 FGGVDILXXXXXXXXXXXXILDTDEQVWDK 504
FGG+DIL +L T E WDK
Sbjct: 5 FGGIDILVSNAATNPVFGPLLQTTEDAWDK 34
>SB_45817| Best HMM Match : Ank (HMM E-Value=0)
Length = 417
Score = 28.7 bits (61), Expect = 4.1
Identities = 28/112 (25%), Positives = 49/112 (43%)
Frame = +1
Query: 55 NNNNKLVLFCCYSGTKRSVVLLINKSLNMSTSANPVRAIQSTRFSGKVAIVTASTEGIGY 234
+NN+ + C+ G V LL+ + N I+ G ++ A+ EG Y
Sbjct: 233 SNNDIPLTSACWKGHHDVVKLLLKYTSN----------IEHRTKDGCTPLMLAAREG-HY 281
Query: 235 AIAKRLGSEGASVVICSRKESNVGKAVQSLRSEGITVEGVVCHVANHEHRRR 390
++AK + A V S E+N+ + + VE ++ H +N EHR +
Sbjct: 282 SVAKLILDSKAEVNKPSGSENNIPLTLACWKGHTKVVELLLEHKSNIEHRNK 333
>SB_37524| Best HMM Match : p450 (HMM E-Value=0)
Length = 362
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 277 ICSRKESNVGKAVQSLRSEGITVEGVVC 360
+C+R ES+ GK + GI V V+C
Sbjct: 18 LCNRLESSAGKPFDITQQSGIAVTNVIC 45
>SB_43699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 651
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -1
Query: 426 HSAKLTCGHFK*SSPMFMIGDVTDDSFHCNALASEALHSFPNVALF 289
H A + G++ +F+IG VT+ ++S+ LH+ PN+ LF
Sbjct: 25 HEANIVLGYY---IAIFVIGFVTNTIVVIIFISSQRLHTTPNLILF 67
>SB_17620| Best HMM Match : CRAL_TRIO (HMM E-Value=9.2)
Length = 254
Score = 28.3 bits (60), Expect = 5.4
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +1
Query: 112 VLLINKSLNMSTSANPVRAIQSTRFSGKVAIVTASTEGIGYAIAKRLG-SEGASV-VICS 285
V+L+N SL+ +++PV AIQ+ F A ++ T+ G I + S A++ + S
Sbjct: 10 VVLVNVSLHDPGTSDPVTAIQAISFQLDEATLSPITQKNGIEIIMDMSDSAFANIDMDLS 69
Query: 286 RKESNVGKAVQSLRSEGITVEGVVCHVANHE--HRRRLFEVATSKF 417
R+ ++ + S + + + + + E H ++FEV +
Sbjct: 70 RRSLDIMQGCNSSHNNQPAIARTINILKDAEFLHSNKMFEVVCKSY 115
>SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -2
Query: 338 MPSLRRLCTAFPTLLSF--RLQMTTEAPSLPSLLAIAYPIPSVDAVTIA 198
+PSL F L S R+++ + PSL S + + +PSVDAV ++
Sbjct: 34 LPSLHSRVEIFEDLPSLHSRVEIFEDLPSLHSRVEVFEDLPSVDAVFVS 82
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 588 DTAPSSLDQLRIRLLGQQPGAFHVNVKYFV 499
D APSS DQ + G P + NVKY +
Sbjct: 102 DDAPSSSDQYPVSSDGSCPHCYSFNVKYII 131
>SB_15933| Best HMM Match : 7tm_1 (HMM E-Value=0.02)
Length = 156
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 426 HSAKLTCGHFK*SSPMFMIGDVTDDSFHCNALASEALHSFPNVALF 289
H A + G++ +F+IG VT+ + S+ LH+ PN+ LF
Sbjct: 9 HEANIVLGYY---IAIFVIGFVTNTIVVITFIFSKRLHTTPNLILF 51
>SB_57471| Best HMM Match : TatC (HMM E-Value=0.27)
Length = 687
Score = 27.9 bits (59), Expect = 7.1
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = -2
Query: 596 MNTILPPPLLTSSGYASLANSQELFTLTSNILSQTCSSVSKIEATAGLTAAFDTRISTPP 417
++T+ L T+S S ++ + N+ S T + T + AF+T I+ P
Sbjct: 526 LSTVNVSALSTTSSIESTTMARVASFIQPNVTSITTIKIDDTSRTPSASVAFETTITPSP 585
Query: 416 NLLVATSNNRLLCS----*LAT*QTTPSTVMPSLRRLCTAFPTL-LSFRLQMTTEAPSLP 252
N+ TS LL + ++T + +T+ S + T +L L + ++TT A
Sbjct: 586 NV---TSYQPLLMTSSAVAISTRAASIATIASSSEHISTWTGSLALLYTERLTTRAIPAD 642
Query: 251 SLLAIAYPIPSVDAVTIAT 195
S ++A + V + ++ +
Sbjct: 643 SASSLAARVTFVVSFSLVS 661
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -2
Query: 485 SVSKIEATAGLTAAFDTRISTPPNL-LVATSNNRLLCS*LAT*QTTPSTVMPSLRRLCTA 309
S+S + T+ ++TR P N L +T N + +PSL + CT
Sbjct: 711 SISSASLLSPATSRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPSLMKSCT- 769
Query: 308 FPTLLSFRLQMTT 270
TL SFR Q+TT
Sbjct: 770 --TLSSFRYQLTT 780
>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -2
Query: 485 SVSKIEATAGLTAAFDTRISTPPNL-LVATSNNRLLCS*LAT*QTTPSTVMPSLRRLCTA 309
S+S + T+ ++TR P N L +T N + +PSL + CT
Sbjct: 214 SISSASLLSPATSRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPSLMKSCT- 272
Query: 308 FPTLLSFRLQMTT 270
TL SFR Q+TT
Sbjct: 273 --TLSSFRYQLTT 283
>SB_9376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 426 HSAKLTCGHFK*SSPMFMIGDVTDDSFHCNALASEALHSFPNVALF 289
H A + G++ +F+IG VT+ + S+ LH+ PN+ LF
Sbjct: 9 HEANIVLGYY---IAIFVIGFVTNTIVVITFIFSKRLHTTPNLILF 51
>SB_58773| Best HMM Match : DUF834 (HMM E-Value=0.83)
Length = 248
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -1
Query: 336 ALASEALHSFPNVAL---FPAADDYGSTFTSQPLSYCVPNSFSRCC 208
A +S + S P+ L FPA G+T T+ P + P++++R C
Sbjct: 161 AYSSGSYSSCPSRTLSGCFPATSFGGTTTTTTPAATTTPSAYTRAC 206
>SB_43241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2022
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 276 DYGSTFTSQPLSYCVPN-SFSRCCYNSHLPTEPSALNCTNRVC 151
DY FT+Q LS CV SFS + + TE + L T R C
Sbjct: 1677 DYHLVFTAQGLSSCVLKFSFSTDEHIQRIQTEMAPLKQTLREC 1719
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/103 (22%), Positives = 46/103 (44%)
Frame = -2
Query: 545 LANSQELFTLTSNILSQTCSSVSKIEATAGLTAAFDTRISTPPNLLVATSNNRLLCS*LA 366
L +S E ++ + + T S S + T T+ ++ ++L T++ +
Sbjct: 378 LTSSMESSSMATTSTTSTPSLESSM-TTNSTTSTLVEAVALSSSVLPTTTSVLTSSMESS 436
Query: 365 T*QTTPSTVMPSLRRLCTAFPTLLSFRLQMTTEAPSLPSLLAI 237
+ TT +T PSL T+ T L+ + T +P LP+ ++
Sbjct: 437 SMATTSTTSTPSLESSMTSNNTTLTLAEAVATSSPVLPTTTSV 479
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 27.5 bits (58), Expect = 9.4
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = -2
Query: 578 PPLLTSSGYASLANSQELFTLTSNIL---SQTCSSVSKIEATAGLTAAFDTRISTPPNLL 408
PPL ++ + L T S ++ S+ ++ S++ T +R+ T P+ L
Sbjct: 1170 PPLAVTTPSRLVTTLSRLVTTPSRLVTTPSRLVTTPSRLVTTPSRLVTTLSRLVTTPSRL 1229
Query: 407 VATSNNRLLCS*LAT*QTTPSTVMPSLRRLCTAFPTLLSFRLQMTTEAPSLPS 249
V T + RL+ TTPS ++ + RL T L++ ++ T LP+
Sbjct: 1230 VTTPS-RLV--------TTPSRLVTTPSRLVTTPSRLVTTLSRLVTTLSGLPN 1273
>SB_47747| Best HMM Match : PMC2NT (HMM E-Value=6.3)
Length = 257
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -2
Query: 584 LPPPLLTSSGYASLANSQELFTLTSNILSQTCSSVSKIEATAGLTAAFDTRISTPP 417
L P L + Y SL T++SNI S + +++ K+ + +T+ F+ + + PP
Sbjct: 100 LQPRLEPTEMYLSLTRPS---TVSSNIPSASLANIDKLMKKSVITSDFEKKHTAPP 152
>SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1885
Score = 27.5 bits (58), Expect = 9.4
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 25 SCKSNYVVFENNNNKLVLFCCYSGTKRSVVLLINKSLNMSTSANPVRAIQSTRFSGKVAI 204
S KS+Y+V N+L Y G S + ++N S+ V ++S R S + +
Sbjct: 57 SRKSSYIVDNGEFNELQKVVLYCGNVNSRKSFVAVTVNSRKSSYIVVTVKS-RTSSYI-L 114
Query: 205 VTASTEGIGYAIAKRLGSEGASVVIC--SRKESNVGKAVQSLRSEGITV 345
VT ++ Y + + + +V+ SR S + V S +S + V
Sbjct: 115 VTVNSRKSSYVVLTVNSRKSSYIVVTVKSRTSSYILLTVNSRKSSYVAV 163
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,494,749
Number of Sequences: 59808
Number of extensions: 411052
Number of successful extensions: 1145
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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