Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j20r
(683 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 28 0.062
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 23 1.8
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 23 2.3
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 3.1
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 22 5.4
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 22 5.4
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 7.1
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 21 9.4
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 21 9.4
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 21 9.4
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 9.4
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 9.4
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 28.3 bits (60), Expect = 0.062
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 116 NIFEVCKINVMFHVSHIHNH*INDVVKPSFKYK 214
NIF+ MFHV+ HN IN VV PS ++
Sbjct: 182 NIFDQVGSLGMFHVNMSHNKLINLVVAPSVPFE 214
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/42 (21%), Positives = 20/42 (47%)
Frame = +2
Query: 419 MERSPFGISRRFDIFYWVVGITSRWVNCVFPANIAVFQSNFF 544
+E + + + F +F + V S W+ + N++ NF+
Sbjct: 25 VENPTYRLYKIFVVFSFAVTFFSAWICALVNYNVSEISENFY 66
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 23.0 bits (47), Expect = 2.3
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 418 WNPEKNAGFSTADKTWLPMAEGYETLNVEVQKASER--SHLKVYKALSD 278
WNP+ T +TW+P+ + N+ Q R + + ++ L+D
Sbjct: 489 WNPKDCDPLITLIETWMPLLPQWILDNIYDQLIMPRIQAEVNIWNPLTD 537
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 647 SRQ*PNGYKIWCFIGRWYQH 588
S++ +GYK+ C+ W Q+
Sbjct: 80 SKKDKDGYKVVCYYTNWSQY 99
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 21.8 bits (44), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 225 IRIFLYLKDGLTTSFI*WL*ICETWNITLILHTSKMF 115
+ + LY+ L T F+ ++ ICE +TL +T +F
Sbjct: 141 VYVILYI---LATVFLAYVWICEMGVVTLQAYTLHLF 174
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 21.8 bits (44), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 225 IRIFLYLKDGLTTSFI*WL*ICETWNITLILHTSKMF 115
+ + LY+ L T F+ ++ ICE +TL +T +F
Sbjct: 141 VYVILYI---LATVFLAYVWICEMGVVTLQAYTLHLF 174
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -2
Query: 577 LLPGVAVTYMGE 542
++PGVAV ++GE
Sbjct: 75 VIPGVAVDFLGE 86
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/22 (27%), Positives = 11/22 (50%)
Frame = -2
Query: 523 GYVSWEDTVDPSGCNTNDPIKY 458
G SW D GC++ + ++
Sbjct: 149 GICSWPDEAKKKGCSSEEVFQF 170
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 380 VSGRESSVFLGVPMERSPFG 439
++G E F GVP + P G
Sbjct: 19 INGEEFCSFQGVPYAQPPIG 38
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 380 VSGRESSVFLGVPMERSPFG 439
++G E F GVP + P G
Sbjct: 21 INGEEFCSFQGVPYAQPPIG 40
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 380 VSGRESSVFLGVPMERSPFG 439
++G E F GVP + P G
Sbjct: 19 INGEEFCSFQGVPYAQPPIG 38
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 380 VSGRESSVFLGVPMERSPFG 439
++G E F GVP + P G
Sbjct: 21 INGEEFCSFQGVPYAQPPIG 40
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,026
Number of Sequences: 336
Number of extensions: 3772
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -