Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j20f
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical pr...    88   5e-18
Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    84   6e-17
Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical pr...    47   9e-06
Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical pr...    47   9e-06
Z30215-4|CAA82936.1|  541|Caenorhabditis elegans Hypothetical pr...    35   0.050
Z81050-6|CAB02856.1|  713|Caenorhabditis elegans Hypothetical pr...    31   0.47 
Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U41021-7|AAL02487.1|  680|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U41021-6|AAL02488.1|  713|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z81533-13|CAB04336.2|  323|Caenorhabditis elegans Hypothetical p...    29   1.9  
U64833-8|AAB04820.1|  432|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z81500-8|CAM84816.1|  284|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z81585-2|CAB04682.2|  303|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U46753-2|AAA85760.1|  894|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical
           protein C38C6.2 protein.
          Length = 647

 Score = 87.8 bits (208), Expect = 5e-18
 Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
 Frame = +1

Query: 139 DWWETSILYQIYPRSFADSDGDGIGDLNGITSKLEYIKELGVGAVWLSPIFKSPMVDFGY 318
           +WW+T++ Y ++  SF DSDGDG+GD++G+ ++L+ +++ GV  VW SP   S   D   
Sbjct: 132 NWWQTAVAYHVWVPSFQDSDGDGVGDVDGLINRLDQLRKSGVQTVWPSPFLISD--DEKT 189

Query: 319 DIANFYEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNG----NE 486
            + +F ++  + G  +  + L+ K +E ++ +V+      TS E  WF  +       N 
Sbjct: 190 AVRSFSQMDPKIGVNQKADELINKIHEKEMNIVISFPIATTSLEHEWFLNSATASKTPNA 249

Query: 487 KYYNYFVWEDGIIDENGNRQPPNNWLSHFRGS 582
            Y  ++ W     D N   +  N +  H +G+
Sbjct: 250 NYSQFYTWVSKAADSNFFTEHKNLFYLHEKGN 281


>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 84.2 bits (199), Expect = 6e-17
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
 Frame = +1

Query: 88  LLFVACSGIII---KNGEVQ--DWWETSILYQIYPRSFADSDGDGIGDLNGITSKLEYIK 252
           L+F     I++   K  E Q  DWW+T + YQ+   +F DSD DG+GD  GI+ K+++++
Sbjct: 75  LMFAGAIAIVVLSPKCAEKQKPDWWQTKVSYQLLTATFYDSDNDGVGDFAGISQKIDFLR 134

Query: 253 ELGVGAVWLSPIFKSPMVDF--GYDIANFYEIHHEYGTMEDFEALLKKANELDIKVVLDL 426
           ++GV  V+ +P+ K    ++   YD+ +   +   +GT E F+ L+   +   + +V+DL
Sbjct: 135 KIGVTTVYPTPVIKIHKDEYFNSYDVVDHNSVDERFGTEEQFKELIDTVHNRAMYLVMDL 194

Query: 427 VPNHTSNESVWFQ 465
             +       WF+
Sbjct: 195 PVSTIDLSHPWFE 207


>Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical
           protein T04A8.7b protein.
          Length = 606

 Score = 47.2 bits (107), Expect = 9e-06
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = +1

Query: 238 LEYIKELGVGAVWLSPIFKSPM-VDFGYDIANFYEIHHEYGTMEDFEALLKKANELDIKV 414
           L  I++ G  A+ L  + +      FGY ++NF+ +    GT ED + L+ KA+ L I +
Sbjct: 130 LPRIQKQGYNAIQLMAVMEHVYYASFGYQVSNFFAVSSRCGTPEDLKYLVDKAHSLGIFM 189

Query: 415 VLDLVPNHTS 444
           +LD+V +H S
Sbjct: 190 LLDVVHSHAS 199


>Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical
           protein T04A8.7a protein.
          Length = 681

 Score = 47.2 bits (107), Expect = 9e-06
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = +1

Query: 238 LEYIKELGVGAVWLSPIFKSPM-VDFGYDIANFYEIHHEYGTMEDFEALLKKANELDIKV 414
           L  I++ G  A+ L  + +      FGY ++NF+ +    GT ED + L+ KA+ L I +
Sbjct: 205 LPRIQKQGYNAIQLMAVMEHVYYASFGYQVSNFFAVSSRCGTPEDLKYLVDKAHSLGIFM 264

Query: 415 VLDLVPNHTS 444
           +LD+V +H S
Sbjct: 265 LLDVVHSHAS 274


>Z30215-4|CAA82936.1|  541|Caenorhabditis elegans Hypothetical
           protein F40F12.4 protein.
          Length = 541

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = +1

Query: 370 FEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKYYNYFVWE 513
           F+A++K+ N+ +I VV +  P  T N   WF+E+LN +   Y+Y  +E
Sbjct: 466 FQAIVKRENKEEI-VVFE-APKLTRNSRRWFRESLNISAGKYDYIAFE 511


>Z81050-6|CAB02856.1|  713|Caenorhabditis elegans Hypothetical
           protein C50B6.7 protein.
          Length = 713

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 8/35 (22%), Positives = 24/35 (68%)
 Frame = +1

Query: 334 YEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNH 438
           Y++    G  ++F+ ++ + N++ +++++D+V NH
Sbjct: 89  YKLDSRSGNEQEFQDMVNRCNKVGVRIIVDIVMNH 123


>Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical
           protein R06A4.8 protein.
          Length = 1467

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
 Frame = +1

Query: 208 IGDLNGITSKLEYIKELGVGAVWLSPIFKSPMVDFGYDIANFYEI-------HHEYGTME 366
           +G L+    +LE   + G   + L+PI +  + +  Y +++ + +         ++G  E
Sbjct: 124 LGPLSEWKERLEVAHQTGYNMIHLTPIHELGISNSSYSLSDHHSLIKTIQSQDQKFG-FE 182

Query: 367 DFEALLKKANEL-DIKVVLDLVPNHTSNESVWFQE 468
           D +AL+       +I  V D+V NH +  + W  E
Sbjct: 183 DVQALVGDLERSWNILTVQDVVWNHAAKNATWLLE 217


>U41021-7|AAL02487.1|  680|Caenorhabditis elegans Hypothetical
           protein F14D12.1a protein.
          Length = 680

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = +1

Query: 358 TMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKY 492
           ++E F  LLKKANE D  + L L   H   E VW Q   N   K+
Sbjct: 79  SIEMFSRLLKKANEDDGSLNLYLNKKHA--EGVWLQNIGNRTRKH 121


>U41021-6|AAL02488.1|  713|Caenorhabditis elegans Hypothetical
           protein F14D12.1b protein.
          Length = 713

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = +1

Query: 358 TMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKY 492
           ++E F  LLKKANE D  + L L   H   E VW Q   N   K+
Sbjct: 79  SIEMFSRLLKKANEDDGSLNLYLNKKHA--EGVWLQNIGNRTRKH 121


>Z81533-13|CAB04336.2|  323|Caenorhabditis elegans Hypothetical
           protein F36G9.6 protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 591 FPSAASKVTQPIIRWLPISIFVYDSVF 511
           FPS   K+   I+RWLP+ IF+Y  +F
Sbjct: 139 FPSDFQKINIKILRWLPL-IFLYPILF 164


>U64833-8|AAB04820.1|  432|Caenorhabditis elegans Hypothetical
           protein B0507.3 protein.
          Length = 432

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -1

Query: 314 PKSTMGDLKIGESQTAPTPNSLIYSNFEVIPFKSPIPSPSLSAKD 180
           P    G LK+  +  AP P   I S  + I  KSP P+PSL A +
Sbjct: 149 PTLVTGPLKVAPASLAPVPME-IQSQEQPIK-KSPAPTPSLDASN 191


>AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical
           protein C48E7.8 protein.
          Length = 820

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 434 FGTRSKTTLMSNSFAFFNRASKSSIVPYSWWIS 336
           FGT    T +   FAF +    S+ VP+ W+IS
Sbjct: 458 FGTECNVTTIWPHFAFVSNFFPSTCVPWLWYIS 490


>Z81500-8|CAM84816.1|  284|Caenorhabditis elegans Hypothetical
           protein F11D11.14 protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +1

Query: 439 TSNESVWFQEALNG-NEKYYNYFVWEDG 519
           ++ E  W +EA+NG +  + NY VW DG
Sbjct: 177 SAEECQWIREAVNGMSPPWNNYGVWIDG 204


>Z81585-2|CAB04682.2|  303|Caenorhabditis elegans Hypothetical
           protein T05E12.2 protein.
          Length = 303

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -3

Query: 585 SAASKVTQPIIRWLPISIFVYDSVFPNEIIVIFFVAIESFLEPNTFV*CMIWYKIQNN 412
           S A  V + +  ++PI  + Y  +FP  II I  + I    +   FV C    +I+ N
Sbjct: 105 SLAIAVERVVAAYIPIYFYKYRPIFPTFIIFILSICIGLNEDVFLFVFCEFSLQIRPN 162


>U46753-2|AAA85760.1|  894|Caenorhabditis elegans Hypothetical
           protein C34F11.5 protein.
          Length = 894

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 441 IKRKCLVPRSSQWQRKILQLFRLGRRNHRRKWK 539
           +KRK +  R  +  +  LQ++R  RR H+RK+K
Sbjct: 533 LKRKLIRKRKRRRIQIKLQMYREQRREHKRKFK 565


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,375,120
Number of Sequences: 27780
Number of extensions: 319840
Number of successful extensions: 890
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)