Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j16r
(364 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein. 90 2e-18
BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25 p... 90 2e-18
BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25 p... 90 2e-18
BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25 p... 90 2e-18
AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25 p... 90 2e-18
BC098277-1|AAH98277.1| 489|Homo sapiens protein kinase, AMP-act... 32 0.48
BC098102-1|AAH98102.1| 489|Homo sapiens protein kinase, AMP-act... 32 0.48
AJ249977-1|CAB65117.1| 492|Homo sapiens AMP-activated protein k... 32 0.48
AF214519-1|AAF73987.1| 464|Homo sapiens AMP-activated protein k... 32 0.48
BC098306-1|AAH98306.1| 489|Homo sapiens protein kinase, AMP-act... 29 3.4
BC098255-1|AAH98255.1| 489|Homo sapiens AMP-activated protein k... 29 3.4
BC028615-1|AAH28615.1| 408|Homo sapiens solute carrier family 3... 29 5.9
AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens ... 29 5.9
Z95326-1|CAI20271.2| 408|Homo sapiens solute carrier family 35,... 28 7.8
BX640761-1|CAE45867.1| 228|Homo sapiens hypothetical protein pr... 28 7.8
BC114925-1|AAI14926.1| 408|Homo sapiens SLC35F1 protein protein. 28 7.8
AL449196-1|CAI16177.2| 408|Homo sapiens solute carrier family 3... 28 7.8
AL136478-1|CAM28261.1| 408|Homo sapiens solute carrier family 3... 28 7.8
AL133379-1|CAI19872.2| 408|Homo sapiens solute carrier family 3... 28 7.8
>M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein.
Length = 125
Score = 89.8 bits (213), Expect = 2e-18
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = -1
Query: 220 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 56
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIK 98
>BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 89.8 bits (213), Expect = 2e-18
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = -1
Query: 220 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 56
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIK 98
>BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 89.8 bits (213), Expect = 2e-18
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = -1
Query: 220 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 56
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIK 98
>BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 89.8 bits (213), Expect = 2e-18
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = -1
Query: 220 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 56
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIK 98
>AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 89.8 bits (213), Expect = 2e-18
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = -1
Query: 220 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 56
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIK 98
>BC098277-1|AAH98277.1| 489|Homo sapiens protein kinase,
AMP-activated, gamma 3 non-catalytic subunit protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -1
Query: 145 TPAVVSERLKVRGSLARRALIELREKGLIKXGSPTPWAGDLPRVRPRA 2
+PAV S ++RG +AL R+K ++ G P P G+ PR RP A
Sbjct: 39 SPAVTSSSERIRGKRRAKALRWTRQKS-VEEGEP-PGQGEGPRSRPAA 84
>BC098102-1|AAH98102.1| 489|Homo sapiens protein kinase,
AMP-activated, gamma 3 non-catalytic subunit protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -1
Query: 145 TPAVVSERLKVRGSLARRALIELREKGLIKXGSPTPWAGDLPRVRPRA 2
+PAV S ++RG +AL R+K ++ G P P G+ PR RP A
Sbjct: 39 SPAVTSSSERIRGKRRAKALRWTRQKS-VEEGEP-PGQGEGPRSRPAA 84
>AJ249977-1|CAB65117.1| 492|Homo sapiens AMP-activated protein
kinase gamma 3 subunit protein.
Length = 492
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -1
Query: 145 TPAVVSERLKVRGSLARRALIELREKGLIKXGSPTPWAGDLPRVRPRA 2
+PAV S ++RG +AL R+K ++ G P P G+ PR RP A
Sbjct: 39 SPAVTSSSERIRGKRRAKALRWTRQKS-VEEGEP-PGQGEGPRSRPAA 84
>AF214519-1|AAF73987.1| 464|Homo sapiens AMP-activated protein
kinase gamma subunit protein.
Length = 464
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -1
Query: 145 TPAVVSERLKVRGSLARRALIELREKGLIKXGSPTPWAGDLPRVRPRA 2
+PAV S ++RG +AL R+K ++ G P P G+ PR RP A
Sbjct: 14 SPAVTSSSERIRGKRRAKALRWTRQKS-VEEGEP-PGQGEGPRSRPTA 59
>BC098306-1|AAH98306.1| 489|Homo sapiens protein kinase,
AMP-activated, gamma 3 non-catalytic subunit protein.
Length = 489
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 145 TPAVVSERLKVRGSLARRALIELREKGLIKXGSPTPWAGDLPRVRPRA 2
+PAV S ++RG +AL R+K ++ G P G+ PR RP A
Sbjct: 39 SPAVTSSSERIRGKRRAKALRWTRQKS-VEEGE-APGQGEGPRSRPAA 84
>BC098255-1|AAH98255.1| 489|Homo sapiens AMP-activated protein
kinase, non-catalytic gamma-3 subunit protein.
Length = 489
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 145 TPAVVSERLKVRGSLARRALIELREKGLIKXGSPTPWAGDLPRVRPRA 2
+PAV S ++RG +AL R+K ++ G P G+ PR RP A
Sbjct: 39 SPAVTSSSERIRGKRRAKALRWTRQKS-VEEGE-APGQGEGPRSRPAA 84
>BC028615-1|AAH28615.1| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 78 SSMSALLAREPRT-FNLSDTTAGVISLYCGTSLYSFSYVGL 197
S M ++ + T NLS TA + SL+CG L+ + + GL
Sbjct: 298 SFMQVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFSGL 338
>AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ39715 fis, clone SMINT2013228. ).
Length = 120
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +1
Query: 160 VGLPCTVSHMWVYQTTPGCSTCH---ELFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSR 330
+GL T +H W Y+ P CS C+ ++++ T H P S + V +P+
Sbjct: 20 LGLLHTHTHTWYYRCEPTCSACYTHTNIYIFKTEF-----HSYCPGWSAMRDLVSLQPAT 74
Query: 331 PSWAASL--NW 357
+ SL NW
Sbjct: 75 SASCLSLPSNW 85
>Z95326-1|CAI20271.2| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 120 NLSDTTAGVISLYCGTSLYSFSYVGL 197
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
>BX640761-1|CAE45867.1| 228|Homo sapiens hypothetical protein
protein.
Length = 228
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 120 NLSDTTAGVISLYCGTSLYSFSYVGL 197
NLS TA + SL+CG L+ + + GL
Sbjct: 133 NLSLLTADLYSLFCGLFLFHYKFSGL 158
>BC114925-1|AAI14926.1| 408|Homo sapiens SLC35F1 protein protein.
Length = 408
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 120 NLSDTTAGVISLYCGTSLYSFSYVGL 197
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
>AL449196-1|CAI16177.2| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 120 NLSDTTAGVISLYCGTSLYSFSYVGL 197
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
>AL136478-1|CAM28261.1| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 120 NLSDTTAGVISLYCGTSLYSFSYVGL 197
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
>AL133379-1|CAI19872.2| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 120 NLSDTTAGVISLYCGTSLYSFSYVGL 197
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,023,104
Number of Sequences: 237096
Number of extensions: 1320375
Number of successful extensions: 2999
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2998
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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