Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j16f
(411 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015... 93 8e-20
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662... 93 1e-19
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 56 1e-08
07_02_0028 + 11964941-11964991,11965259-11966101,11966249-119665... 32 0.21
03_05_0586 - 25875703-25876332,25876426-25876713,25877064-258771... 31 0.36
12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525 30 0.63
05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422 30 0.83
11_04_0025 + 12382485-12382823,12382835-12382894,12382960-123830... 29 1.1
02_02_0584 - 11853149-11853573,11853673-11853787,11853868-118539... 29 1.9
03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635 28 3.3
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521... 27 4.4
04_03_0989 - 21475147-21475361,21477029-21477074,21477364-21479292 27 4.4
04_03_0916 + 20794240-20794246,20794585-20796545 27 4.4
03_05_0350 + 23368111-23368219,23368519-23368526,23368650-233686... 27 4.4
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 27 4.4
02_03_0349 + 18010414-18014283 27 4.4
12_01_0864 - 8205371-8205913,8206304-8206452,8206677-8206737,820... 27 5.8
10_05_0041 - 8469769-8470164 27 5.8
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338... 27 5.8
03_05_0742 + 27310404-27310457,27311281-27311286,27311350-273114... 27 5.8
12_02_1263 + 27423411-27423464,27423985-27424104,27424200-274242... 27 7.7
10_01_0146 - 1719997-1720386,1721498-1721515 27 7.7
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 27 7.7
01_06_1624 + 38725452-38725537,38725823-38725844,38726194-38728038 27 7.7
>09_06_0339 -
22400534-22400647,22401264-22401398,22401491-22401565,
22401646-22401648
Length = 108
Score = 93.1 bits (221), Expect = 8e-20
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = +1
Query: 145 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 324
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L ++GLI+ V H
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAMKDLMDRGLIRMVSVH 96
Query: 325 HGQVIYTRAT 354
Q IYTRAT
Sbjct: 97 CSQQIYTRAT 106
>08_02_1576 +
27965862-27965864,27965952-27966026,27966113-27966247,
27967080-27967193
Length = 108
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = +1
Query: 145 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 324
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L +GLI+ V H
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIRMVSVH 96
Query: 325 HGQVIYTRAT 354
Q IYTRAT
Sbjct: 97 SSQQIYTRAT 106
>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 55.6 bits (128), Expect = 1e-08
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +1
Query: 145 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLK 249
+NN VLFDK TY+KL EVP+YK ITP+V+SERL+
Sbjct: 971 VNNSVLFDKATYDKLLSEVPKYKQITPSVLSERLR 1005
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 250 VRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 354
+ GSLAR+A+ +L +G I+ V H Q+IYTRAT
Sbjct: 1090 INGSLARQAIKDLESRGAIRVVSVHSSQLIYTRAT 1124
>07_02_0028 +
11964941-11964991,11965259-11966101,11966249-11966560,
11966640-11967073,11967500-11967941
Length = 693
Score = 31.9 bits (69), Expect = 0.21
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 217 ITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 363
+TPAV E+ + + AR+ L + RE I+ +QH+ Q+++ +K D
Sbjct: 613 LTPAVYLEQHRFKLEKARQRLTDHRECQNIEATIQHNQQLVHVEKSKLD 661
>03_05_0586 -
25875703-25876332,25876426-25876713,25877064-25877194,
25877299-25877812
Length = 520
Score = 31.1 bits (67), Expect = 0.36
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 36 REGFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPGV 161
R G G + + E G+ +WR+ +EEE Q+K + E+ V
Sbjct: 345 RGGRGGESEERRRERGKGKWREEEEEEEEQQKGQEEEEEEQV 386
>12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525
Length = 212
Score = 30.3 bits (65), Expect = 0.63
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 217 ITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 363
ITPAV E+ + + A++ L + RE+ I+ +Q + Q++Y +K D
Sbjct: 116 ITPAVYLEQHQFKLERAKQRLADRRERMDIEATIQANRQLVYEEKSKLD 164
>05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422
Length = 259
Score = 29.9 bits (64), Expect = 0.83
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +1
Query: 214 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 363
++TPA E+ + + A++ L+E RE+ I+ +Q + Q+++ +K D
Sbjct: 167 VLTPAAYFEQHQFKLEKAKQRLVERRERKEIEATIQANRQLVHEEKSKLD 216
>11_04_0025 +
12382485-12382823,12382835-12382894,12382960-12383073,
12383187-12383837
Length = 387
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +1
Query: 214 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 363
+ITPA+ E+ + + A++ + + RE+ +I+ +Q + Q+++ K D
Sbjct: 237 IITPAIYLEQHQFKLEKAQQRIADRRERKVIEATIQANRQLVHEEKAKLD 286
>02_02_0584 -
11853149-11853573,11853673-11853787,11853868-11853981,
11854049-11854108,11854265-11854600,11854681-11854724,
11854776-11855507,11855736-11855921,11856012-11856153,
11856250-11856300
Length = 734
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 214 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 363
++TPAV E+ + + A+ L E RE+ I+ +Q + Q+++ +K D
Sbjct: 599 ILTPAVYLEQHQFKLKKAKLRLAERRERKDIEATIQANRQLVHEEKSKLD 648
>03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635
Length = 603
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 311 CLMRPFSLSSMSALLAREPRTFNL 240
C +RP S +++ AL+AR PR L
Sbjct: 217 CYVRPVSFAALEALVARSPRLTRL 240
>06_03_1117 +
27750291-27750338,27751360-27751812,27751987-27752161,
27752227-27752551,27752705-27752786,27752820-27752889,
27753341-27753420,27753514-27753750
Length = 489
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 42 GFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPG 158
GFG S N+ +RWR + +++ Q Q ++PG
Sbjct: 427 GFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPG 465
>04_03_0989 - 21475147-21475361,21477029-21477074,21477364-21479292
Length = 729
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 133 LFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSWAASL 14
+F W S L R+R+L + F+A+ P + SWAA L
Sbjct: 65 VFTWNCMVSGLIRNRMLAEARKVFDAM-PVRNSVSWAALL 103
>04_03_0916 + 20794240-20794246,20794585-20796545
Length = 655
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 235 IRQQV*LACTVGLPCTVSH-MWVYQTTPGCSTCHELFLWTTSSSWLCRHRI 86
I Q + L +G C + VY+ P S H+LF T+ +W R+ I
Sbjct: 399 IIQHINLVKLIGFCCEGGRRLLVYEHMPNRSLDHQLFQTNTTLTWNIRYEI 449
>03_05_0350 +
23368111-23368219,23368519-23368526,23368650-23368658,
23368768-23368839,23368978-23369097,23369638-23370058,
23370131-23370285,23370461-23370625,23370822-23370825,
23371739-23371799,23371933-23372035,23372422-23372854,
23372978-23373120,23373608-23373740,23375567-23375576,
23375852-23375975,23376595-23377012,23377153-23377343,
23377569-23377811
Length = 973
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 263 WREEHSSNLGKKVSSNR*SNTMGR*STRVRPR 358
W ++ SS+ G K+ + R SNT + S + PR
Sbjct: 528 WMQKDSSSKGNKIGNTRSSNTPSKFSGCILPR 559
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 24 AQEGREGFGQTASKNTEEEGRIRWRQSQEEE 116
A+E EG G K EEE R R R+ +EEE
Sbjct: 468 AEEEEEGGGGKGEKEREEEER-RQREKEEEE 497
>02_03_0349 + 18010414-18014283
Length = 1289
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 169 KPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELRE 294
KPT E+L K +PQ K++ AV E + + L +LR+
Sbjct: 39 KPTRERLEKLLPQIKVVLDAVDMEHIGDQSDALDAWLWQLRD 80
>12_01_0864 -
8205371-8205913,8206304-8206452,8206677-8206737,
8206815-8206917,8207197-8207492
Length = 383
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 214 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 363
++TP V E+ + + A+ L E RE+ I+ +Q + Q+++ +K D
Sbjct: 280 ILTPGVYLEQHQFKLEKAKLRLAERRERKDIEATIQANRQLVHEEKSKLD 329
>10_05_0041 - 8469769-8470164
Length = 131
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 21 AAQEGREGFGQTASKNTEEEGRIRWRQSQEEEV 119
A + GREG G+ +S ++ R RW+ +++
Sbjct: 31 ARERGREGGGEASSTTIDDGERRRWQDGLRDDL 63
>03_06_0576 +
34832900-34832911,34833006-34833122,34833752-34833810,
34833901-34833960,34834197-34834250,34834332-34834380,
34834493-34834540,34834889-34834954,34835591-34835641,
34835732-34835851,34835921-34836005,34836428-34836509,
34836666-34836774,34837005-34837051,34837131-34837188,
34839114-34839220,34839700-34839765,34839833-34839879,
34839977-34840042,34840146-34840243,34840344-34840469,
34840551-34840835,34840920-34840985,34841079-34841228
Length = 675
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 250 VRGSLARRALIELREKGLIKQVVQHHGQVIYT 345
+RG +RAL +R+ G I++VVQ+ Q Y+
Sbjct: 239 IRGIGGQRALKLIRQHGYIEEVVQNLSQTRYS 270
>03_05_0742 +
27310404-27310457,27311281-27311286,27311350-27311469,
27311597-27311695,27311787-27311795,27311843-27311980,
27312084-27312218,27312308-27312517,27312592-27312798,
27312891-27313010,27313079-27313198,27313279-27313401,
27313501-27313605,27313764-27313908,27314658-27315148,
27315236-27315268,27315556-27315637,27315747-27315907,
27316021-27316206,27316294-27316476,27316573-27316751,
27317009-27317105
Length = 1000
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -2
Query: 248 FNLSDTTAGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPLDHFFFL 105
F ++ A +I++Y + S +G + WL+NL FPLD FL
Sbjct: 843 FFVAQLIATLIAVYANWAFTSIKGIGWGWAGIVWLYNLVFYFPLDIIKFL 892
>12_02_1263 +
27423411-27423464,27423985-27424104,27424200-27424298,
27424405-27424542,27424647-27424706,27424865-27425044,
27425132-27425338,27425415-27425534,27425609-27425728,
27425819-27425941,27426074-27426178,27426379-27426523,
27426967-27427131,27427228-27427466,27427553-27427585,
27427894-27427975,27428100-27428260,27428422-27428607,
27428700-27428882,27428969-27429147,27429386-27429482
Length = 931
Score = 26.6 bits (56), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -2
Query: 248 FNLSDTTAGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPLDHFFFL 105
F ++ A +I++Y + S +G + WL+NL FPLD FL
Sbjct: 774 FLVAQLIATLIAVYADWAFTSIKGIGWGWAGIVWLYNLIFYFPLDIIKFL 823
>10_01_0146 - 1719997-1720386,1721498-1721515
Length = 135
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 50 PNSLKKHRRRRKDPVAAKPRRRS 118
P+ + RRRR +P +PRRR+
Sbjct: 83 PDDGGQRRRRRSEPATTQPRRRA 105
>08_02_1171 +
24880363-24881355,24882553-24882702,24883505-24884210,
24885012-24885404,24885759-24885805,24886088-24886111
Length = 770
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 399 FFNLYHSLCDWIIALGRTRVDHLP 328
+ NL+H++ DW A +RV LP
Sbjct: 345 YANLFHTITDWYSAYVSSRVTDLP 368
>01_06_1624 + 38725452-38725537,38725823-38725844,38726194-38728038
Length = 650
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -2
Query: 293 SLSSMSALLAREPRTFNLSDTTAGV---ISLYCGT 198
S S + R+P ++NL D TAG + L CG+
Sbjct: 173 SCSCLKGFSIRDPNSWNLGDQTAGCRRNVMLQCGS 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,735,313
Number of Sequences: 37544
Number of extensions: 249228
Number of successful extensions: 843
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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