Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j14f
         (457 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.59 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.59
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 311 QNI*CGLFDCLPFPCSCLSTCDQITDALS 225
           QN    + DC P PC    TC  + ++ S
Sbjct: 217 QNCELNVDDCKPNPCQNGGTCHDLVNSFS 245


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 266 SCLSTCDQITDALSNLRQL 210
           +C STC+Q  D  S L +L
Sbjct: 309 ACASTCEQANDTPSILHEL 327


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 266 SCLSTCDQITDALSNLRQL 210
           +C STC+Q  D  S L +L
Sbjct: 309 ACASTCEQANDTPSILHEL 327


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 264 GAWKRQTVKEATLNVLV 314
           GAW+RQT    T+  LV
Sbjct: 838 GAWERQTGHNFTMEYLV 854


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 183  VELAPPKLSELPQIRQGIGNLITSAKTGAWKRQT-VKEATLN 305
            VEL     +    + Q IG ++T   T   KR+T V++ +L+
Sbjct: 1259 VELVSMIKARFVVVNQQIGGIVTYFSTNLPKRETEVRKKSLD 1300


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = +3

Query: 264 GAWKRQTVKEATLNVLVGAEVIFWFYIGECIGKRHLVGYD 383
           G + R     +  N  +GA ++     G   G+R ++GY+
Sbjct: 265 GVYGRSFTLASASNNKLGAPIVAGGDAGRYTGERGMMGYN 304


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 180  RVELAPPKLSELPQIRQGIGNLITSAKTGAWK 275
            R +L  P   E P +R+G    ++S +   WK
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSSTEILFWK 1237


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 180  RVELAPPKLSELPQIRQGIGNLITSAKTGAWK 275
            R +L  P   E P +R+G    ++S +   WK
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSSTEILFWK 1237


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 180  RVELAPPKLSELPQIRQGIGNLITSAKTGAWK 275
            R +L  P   E P +R+G    ++S +   WK
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSSTEILFWK 1237


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 180  RVELAPPKLSELPQIRQGIGNLITSAKTGAWK 275
            R +L  P   E P +R+G    ++S +   WK
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSSTEILFWK 1237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,768
Number of Sequences: 336
Number of extensions: 1746
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)