Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j11f
(619 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 218 3e-57
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 4e-35
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 138 4e-33
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 111 3e-25
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 103 9e-23
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 90 2e-18
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 82 3e-16
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 74 1e-13
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 69 3e-12
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 59 3e-09
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 59 3e-09
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 58 4e-09
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 50 2e-06
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 48 6e-06
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 41 7e-04
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 38 0.009
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 29 2.3
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 29 3.0
SB_3213| Best HMM Match : zf-C2H2 (HMM E-Value=3.8e-40) 29 4.0
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 4.0
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 28 5.3
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 28 5.3
SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06) 28 7.0
SB_17384| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 9.2
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 218 bits (533), Expect = 3e-57
Identities = 101/187 (54%), Positives = 136/187 (72%)
Frame = +2
Query: 59 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLA 238
M++L +AL+ LA +E+ EE+VLVL++ NF+ + +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 239 PEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQAD 418
PEYAKAA +L E+S IKLAKVDAT E L E + V+GYPT+KFF++G P +Y+GGR A
Sbjct: 61 PEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAP 120
Query: 419 DIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFSDQSSARAKTFLSTAQVVDDQV 598
+I+SWL KKTGPPA ++ +A+ K+ I V V GFF+D+ S AK FLS A +DD
Sbjct: 121 EIVSWLNKKTGPPAKDLATADAMKDFI-TKEVAVVGFFTDKESDAAKAFLSAADGIDDVE 179
Query: 599 FAIVSDE 619
F IVSD+
Sbjct: 180 FGIVSDK 186
Score = 87.4 bits (207), Expect = 8e-18
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Frame = +2
Query: 44 ADNIEMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVITTTEY-ILVEFYAP 211
++N++ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 212 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSP 388
WCGHCK LAP + + K ++ + I +AK+D+T + E V +PT+K+F + G
Sbjct: 413 WCGHCKQLAPIWDQLGEKY-KDHADIVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEA 469
Query: 389 IDYSGGRQADDIISWLK---KKTGPPAVE 466
+DY+GGR DD + +L+ K PA E
Sbjct: 470 VDYNGGRTLDDFVKFLESGGKAGNEPAAE 498
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 144 bits (350), Expect = 4e-35
Identities = 68/148 (45%), Positives = 97/148 (65%), Gaps = 6/148 (4%)
Frame = +2
Query: 110 DEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPI 289
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEYAKAA K+ + P+
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPV 114
Query: 290 KLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG-----P 454
AK+DAT D+A+ + V GYPTLK FR G+P +Y G R+ I+ ++KK++ P
Sbjct: 115 PFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPNWKPP 174
Query: 455 PAVEVT-SAEQAKELIDANTVIVFGFFS 535
P +T + E E+++ ++++ FF+
Sbjct: 175 PVAALTLTKENFTEVVNRESLMLVEFFA 202
Score = 138 bits (333), Expect = 4e-33
Identities = 69/168 (41%), Positives = 99/168 (58%), Gaps = 2/168 (1%)
Frame = +2
Query: 119 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 298
P L L+K NF V+ +LVEF+APWCGHCK LAPEY KAA +L + + PI LA
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLA 232
Query: 299 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSA 478
VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S+++ + GP + ++S
Sbjct: 233 IVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRSQVGPSSRILSSL 292
Query: 479 EQAKELI-DANTVIVFGFFSDQSSARAKTFL-STAQVVDDQVFAIVSD 616
+ ++ + + + V + GFF + +++L + V DD FA D
Sbjct: 293 KAVQDFMKEKDDVTIMGFFDGEDDKMLESYLEANNDVRDDYPFAHTFD 340
Score = 68.9 bits (161), Expect = 3e-12
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Frame = +2
Query: 47 DNIEMRVLIFTAIALLGLALGDEVP--TEENVLVLSKANFETVITTTEY-ILVEFYAPWC 217
D++ V F A L + VP +E V V+ F+ ++ + +L+EFYAPWC
Sbjct: 496 DSLREFVEEFKAGNLKPIIKSQPVPKSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWC 555
Query: 218 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN---GSP 388
G +L P + K +++ I +AK+DAT D+ +Y V G+PT+ F + +P
Sbjct: 556 G--IALEPTFKKLGKHFRNDKN-IVIAKIDAT-ANDVPSTYAVEGFPTIYFATSKDKKNP 611
Query: 389 IDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKE 493
I + GGR+ D+I ++++K A S E+AK+
Sbjct: 612 IKFDGGRELKDLIKFVEEK----ATVSLSKEKAKD 642
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 138 bits (333), Expect = 4e-33
Identities = 70/157 (44%), Positives = 96/157 (61%), Gaps = 3/157 (1%)
Frame = +2
Query: 131 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDA 310
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L + + P+ LAKVD
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDC 598
Query: 311 TQE-QDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQ 484
T+ +D YGV GYPTLK FRNG DY G R + II ++KK+ GP +VE+ S +
Sbjct: 599 TEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPSSVEIKSVDH 658
Query: 485 -AKELIDANTVIVFGFFSDQSSARAKTFLSTAQVVDD 592
K+L DA + +V GF + F+ TA + D
Sbjct: 659 LEKKLDDAESNVVVGFLDGDDDLK-NAFMRTANEMRD 694
Score = 64.9 bits (151), Expect = 5e-11
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +2
Query: 134 VLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDA 310
V V+ NF+ ++ T+ +L+EFYAPWCGHCKSL P+Y + KL ++ I +AK+DA
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKL-QDVKDIVIAKMDA 922
Query: 311 TQEQDLAESYGVRG 352
T D ++ V+G
Sbjct: 923 T-ANDAPPNFSVQG 935
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 338 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 451
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 111 bits (268), Expect = 3e-25
Identities = 50/112 (44%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
Frame = +2
Query: 122 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 301
T+ V+ L+K NF+ V+ ++ LVEFYAPWCGHCK LAP Y + + + S + +AK
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQLG-EAYTQSSDVIIAK 78
Query: 302 VDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKKTG 451
VDA ++DL + V+G+PT+K+F GS P +Y+GGR +D I ++++KTG
Sbjct: 79 VDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTG 130
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 103 bits (248), Expect = 9e-23
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 14/171 (8%)
Frame = +2
Query: 125 EENVLVLSKANFET-VITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 301
+E+V+ L+ NFE V+ + + LVEF+APWCGHC+ LAPE+AKAAT+L + +K+
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATEL---KGKVKVGA 134
Query: 302 VDATQEQDLAESYGVRGYPTLKFFRNG-----SPIDYSGGRQADDIISWLKKKTG----- 451
+DAT A Y V+GYPT+K F G S DY GGR A DII + K
Sbjct: 135 LDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDKAADSIEP 194
Query: 452 PPAVEVTSAEQAKELIDANTVIVFGFFS---DQSSARAKTFLSTAQVVDDQ 595
P ++ S E KE + + + V F D ++ T+L+ + + ++
Sbjct: 195 PEVIQAISNEVLKEGCNEHPICVIAFLPHILDSGASGRNTYLANLKELGEK 245
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 320 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 427
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/113 (38%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Frame = +2
Query: 125 EENVLV--LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 298
E++ LV L ++F + TE++LV FYAPWCGHCK+ P+Y KAA ++ + + A
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRV-FA 202
Query: 299 KVDATQEQDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGP 454
K+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS++++ P
Sbjct: 203 KLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Score = 80.6 bits (190), Expect = 9e-16
Identities = 35/114 (30%), Positives = 61/114 (53%)
Frame = +2
Query: 95 GLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 274
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y KAA L +
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHD 98
Query: 275 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL 436
E++ LA VD T+ +D+A+ + GYPT+K ++ + + + ++ L
Sbjct: 99 EDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 82.2 bits (194), Expect = 3e-16
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +2
Query: 110 DEVP---TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 280
DE P T V+ L F+ + +LV FYAPWCGHCK++ PEY AA L E+E
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQE 132
Query: 281 SPIKLAKVDATQEQDLAESYGVRGYPT 361
P LA VDAT+E L + + V GYPT
Sbjct: 133 IPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 64.5 bits (150), Expect = 7e-11
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 21/136 (15%)
Frame = +2
Query: 113 EVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA----------- 259
E+P+E V LS F++ + +++LV FYAPWCGHCK PE AA
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAAKHHKDKNKRAL 249
Query: 260 ---------TKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 412
L I A VD T+E + + +GV GY F + Y+ GR+
Sbjct: 250 SLRDFDFSNDTLCNRRRLIAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGRE 305
Query: 413 ADDIISWL-KKKTGPP 457
A D I ++ + GPP
Sbjct: 306 AKDFIQFMDDPREGPP 321
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 188 ILVEFYAPWCGHCKSLAPEYAKAATKLAEE 277
+++ Y CG+CK PE+A AAT+ +E
Sbjct: 2 VVIVLYIAGCGYCKRFKPEFAAAATEHKDE 31
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 98 LALGDEVPTEENVLV-LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATK-LA 271
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP+Y A + L
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLI 182
Query: 272 EEESPIKLAKVDATQE----QDLAESYGVRGYPTLKFFRNGSPID 394
+ ++LAKVD + + + Y V+ PT+ F +G ++
Sbjct: 183 LSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVE 227
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +2
Query: 119 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 298
P VL L+ NF I EY+LV+FYAPWC C+ L+P + AA +L + ++ A
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLRFA 107
Query: 299 KV 304
KV
Sbjct: 108 KV 109
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +2
Query: 143 LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 322
L+ NF+ +I + +LV+FYAPWC HC+ L P+ AA LA + + AKVD T +
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALA-AKGLFQFAKVDCTDPR 83
Query: 323 D--LAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKT 448
L +++ + GYP++K F+ G DY G R ++++++ T
Sbjct: 84 SKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVT 128
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 72.5 bits (170), Expect = 2e-13
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 98 LALGDEVPTEENVLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 274
+AL + NV L +F + +T+ + V+F+APWC C L PEY KAA
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVG 333
Query: 275 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 439
+ P+ VD T L Y +R YPT + N P + G A DII +++
Sbjct: 334 K--PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +2
Query: 140 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 319
V SK F V+ + + +V+FYAPWCG C AP+Y + A L + ++ AKV+ Q+
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKML---KGKVRAAKVNCEQD 494
Query: 320 QDLAESYGVRGYPTLKFF 373
L + YPT++ +
Sbjct: 495 YGLCSEANIHSYPTVRLY 512
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +2
Query: 131 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 301
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L + + P+ LAK
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 70
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 58.8 bits (136), Expect = 3e-09
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = +2
Query: 131 NVLVLS-KANFETVITT--TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 301
NV VL + F +T T+ ++ +F A WCG CKS+AP Y + L+E+ K
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVY----SGLSEKYKQAVFLK 63
Query: 302 VDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 451
+D Q+LA GV PT +FF+N +D G + +KK G
Sbjct: 64 IDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKWIG 113
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +2
Query: 131 NVLVLSKANFETVITT---TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 301
NV+V+ +F +V + ++++F A WCG CKS+AP + + K + + K
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMD----VVFLK 64
Query: 302 VDATQEQDLAESYGVRGYPTLKFFRNGSPID 394
VD Q Q AES G+R PT F+ N + ID
Sbjct: 65 VDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/109 (23%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +2
Query: 128 ENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 307
+ ++ + N + + ++++ + FYAPW HC+ + + + A + A+ + I + K +
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRDD-IVVGKSN 84
Query: 308 ATQEQDLAESYGVRGYPTLKFFRNGSPID--YSGGRQADDIISWLKKKT 448
A ++ +A Y + YP ++F GS + Y GG + DD I ++ ++
Sbjct: 85 AYEDVKIATRYWIDRYPMFRYFIKGSTTEETYDGGFKPDDFIRFIAARS 133
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 125 EENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKL-AK 301
E + L+ +F+ + E +LV+FYAPWC C +L P+Y KAA LA+E + A
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKAL 80
Query: 302 VDATQEQDLAESYGVRGYPTLKFFRNG 382
++ Q GV + TL + G
Sbjct: 81 MNTNSTQTTCLPMGVHYWRTLLAYTIG 107
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = +2
Query: 122 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 301
+E V +L+K F+ I + V+FYAPWC HC LAP + + A ++ + I ++K
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAPIWERLAEDF-KDNADITISK 145
Query: 302 VDATQEQDLAESYGVRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 436
++ GYPTL F++G +YSG R D + ++
Sbjct: 146 IN--------------GYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 233 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 412
+ P + + ++E+ + +AKVD T + +L +R YPT+K + +G Y+G R
Sbjct: 1 MMPAWEALGEQYSKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRN 60
Query: 413 ADDIISWLKK 442
A+D+ ++ K
Sbjct: 61 AEDMKVFVDK 70
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +2
Query: 161 ETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESY 340
+ VI + +L+ FY PWCG C + AP A + ++ S + + ++DA Q DL +
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP-VLLAVARFFQDISQVSVTRIDADQ-NDLPWNL 586
Query: 341 GVRGYPTLKFFRNG 382
V YP++ F G
Sbjct: 587 TVSSYPSIILFPAG 600
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 149 KANFETVITTTE--YILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQ 316
+A F +VI T+ ++++FYA WCG C+ + P++ K A EE + AK+D +
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA---LEEFKDVFFAKIDVDE 72
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 41.1 bits (92), Expect = 7e-04
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Frame = +2
Query: 128 ENVLVLSKANFETVITTTEYILVEFYAPWCGHCKS--LAPEYAKAATKLAEEESP--IKL 295
+ V+ L + NF+ + ++ +++ FY H S L + +A P + +
Sbjct: 47 KRVIDLDRNNFDRTLKQSKMLVLLFYLSSRSHPDSEKLWKSDRQMLEVVARILQPQGVTV 106
Query: 296 AKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTS 475
A V+ +E +LA+ GV+ + F G ++Y G + + + + PP + +
Sbjct: 107 AAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYY-GHSCNLTNNVVFQMFDPPVTNIDN 165
Query: 476 AEQAKELIDANTVIVFGFFSDQSSARAKTFLSTAQVVDDQV-FAIVSDE 619
+Q L DA V G+F D + + K F A+ + F +V+D+
Sbjct: 166 KKQRTLLEDAEGTKVVGYF-DLENPQFKEFEEAAKNFQPLIPFYVVTDK 213
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 206 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 385
A WC CK L P + +AE++ + LAKVD +LA ++GV PT+ + G
Sbjct: 46 ACWCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102
Query: 386 PIDY 397
+++
Sbjct: 103 VMEH 106
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 212 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 391
WC CK L P + +AE++ + LAKVD +LA ++GV PT+ + G I
Sbjct: 2 WCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVI 58
Query: 392 D 394
+
Sbjct: 59 N 59
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 158 FETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 307
F+ + E ++F A WCG C+ + P++ ++A+E +K AKVD
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKF----EEMAKEFKGVKCAKVD 49
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 338 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 451
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 194 VEFYAPWCGHCKSLAPEYAKAATKL 268
V FYAPWCG + E+ AA+ L
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAASLL 481
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 131 NVLVLSKANFETVITTTEYILVEFYA 208
NV++L + NF+ VI + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 344 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 436
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 212 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQD 325
WCG CK+L P++A+ + ++A+ + + +E D
Sbjct: 8 WCGACKALRPKFAE-SKEVAQLSKKFVMVHLQENEEPD 44
>SB_3213| Best HMM Match : zf-C2H2 (HMM E-Value=3.8e-40)
Length = 595
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +1
Query: 481 TG*RTYRCQYCYCIWFLFGPELSQSQNF-----PFNCSGC 585
TG R YRC YC + F + +L Q N P+ C C
Sbjct: 486 TGARPYRCPYCLKL-FRYSGDLKQHINIHTGQRPYQCESC 524
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 290 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 391
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/49 (22%), Positives = 22/49 (44%)
Frame = +2
Query: 194 VEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESY 340
+ F A WC C++ PE + + + ++ V + + QD + Y
Sbjct: 178 IYFSAHWCPPCRAFTPELVSTYDAVRKANNAFEVIFVSSDRSQDSFKDY 226
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/29 (31%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +2
Query: 155 NFETVITTTEYIL--VEFYAPWCGHCKSL 235
+F+ +++++ +L V F+APW HC +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06)
Length = 257
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 182 EYILVEFYAPWCGHCKSLAPEYAKAAT 262
+YI+ +F CG CK+LAP ++ T
Sbjct: 123 KYIMKKFCQKECGLCKALAPPICQSTT 149
>SB_17384| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 425
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 481 TG*RTYRCQYCYCIWFLFGP----ELSQSQNFPFNCSGC 585
TG + +RC+ C+ + ELS S+ PFNC C
Sbjct: 340 TGQKPFRCRTCFRAFAQSSTRNKHELSHSREKPFNCKYC 378
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,563,778
Number of Sequences: 59808
Number of extensions: 338089
Number of successful extensions: 1003
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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