Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j10f
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E47FFA Cluster: PREDICTED: hypothetical protein;... 135 9e-31
UniRef50_UPI00015B60F4 Cluster: PREDICTED: similar to CG2006-PA;... 122 8e-27
UniRef50_UPI0000DB7F68 Cluster: PREDICTED: similar to CG2006-PA;... 118 1e-25
UniRef50_Q9VAL1 Cluster: CG2006-PA; n=5; Diptera|Rep: CG2006-PA ... 116 6e-25
UniRef50_Q8N5C7 Cluster: DTW domain-containing protein 1; n=20; ... 108 8e-23
UniRef50_A7SR31 Cluster: Predicted protein; n=1; Nematostella ve... 99 4e-20
UniRef50_Q5XJ56 Cluster: DTW domain containing 1; n=2; Danio rer... 98 1e-19
UniRef50_O18212 Cluster: Putative uncharacterized protein; n=2; ... 79 8e-14
UniRef50_Q54C26 Cluster: Putative uncharacterized protein; n=1; ... 78 2e-13
UniRef50_UPI0000499814 Cluster: conserved hypothetical protein; ... 63 6e-09
UniRef50_Q4FWU1 Cluster: Putative uncharacterized protein; n=6; ... 62 1e-08
UniRef50_Q7QRD2 Cluster: GLP_503_17068_15434; n=1; Giardia lambl... 48 1e-04
UniRef50_Q8WVG9 Cluster: DTWD1 protein; n=1; Homo sapiens|Rep: D... 47 3e-04
UniRef50_UPI0000EB084E Cluster: DTW domain containing 1; n=1; Ca... 45 0.002
UniRef50_UPI00006CF9AD Cluster: DTW domain containing protein; n... 43 0.006
UniRef50_Q4SHM7 Cluster: Chromosome 5 SCAF14581, whole genome sh... 38 0.14
UniRef50_A4XIE4 Cluster: Peptidase A24A domain protein; n=1; Cal... 34 2.2
UniRef50_Q1RL49 Cluster: Zinc finger protein; n=1; Ciona intesti... 34 2.9
UniRef50_Q5KJP4 Cluster: Shuttle craft like transcriptional regu... 33 3.9
UniRef50_Q55WK2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_A2F991 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_Q3YR25 Cluster: Putative uncharacterized protein; n=3; ... 33 6.7
UniRef50_Q2RI80 Cluster: Peptidase A24A-like; n=2; Bacteria|Rep:... 32 8.9
>UniRef50_UPI0000E47FFA Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 347
Score = 135 bits (326), Expect = 9e-31
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Frame = +2
Query: 254 KNRIAKACDDRPFEGLIITNTEPLSSLSSRSACPRCGKSRMYFCYVCFIPVPALEGKIPY 433
K R PFEG+ I + + L +L RS C C +SR YFCY C++PVP L+ K+P
Sbjct: 5 KKRPKPTDGSNPFEGMKIASHDALVALKQRSKCSECRRSRKYFCYNCYVPVPELKDKLPI 64
Query: 434 CKLPIKVDIIKHKGEINGKSTAAHAAVLAPRDVTVYTYPDIPDY--PTDGKVVWLFP 598
KLP+KVD+IKH E++GKSTA HAAVLAP DV++YTYP IP+Y P++ KVV +FP
Sbjct: 65 VKLPVKVDVIKHSREVDGKSTAIHAAVLAPDDVSMYTYPTIPNYDDPSE-KVVLVFP 120
>UniRef50_UPI00015B60F4 Cluster: PREDICTED: similar to CG2006-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG2006-PA - Nasonia vitripennis
Length = 468
Score = 122 bits (293), Expect = 8e-27
Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +2
Query: 269 KACDDRPFEGLIITNTEPLSSLSSRSACPRCGKSRMYFCYVCFIPVPALEGK-IPYCKLP 445
K D PF L I + L ++ R C +C KSR +FCY C+ PV ++ K IP KLP
Sbjct: 29 KVIDRAPFRHLKIDDASCLDTIEGREICGKCYKSRKFFCYTCYSPV--IDDKFIPRIKLP 86
Query: 446 IKVDIIKHKGEINGKSTAAHAAVLAPRDVTVYTYPDIPDYPTDGKVVWLFP 598
IK+DIIKH EI+GKSTA HAA++AP DV +YTYPD P++ D K V +FP
Sbjct: 87 IKIDIIKHVQEIDGKSTAIHAAIVAPEDVKIYTYPDFPEFSADEKTVLIFP 137
>UniRef50_UPI0000DB7F68 Cluster: PREDICTED: similar to CG2006-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG2006-PA
- Apis mellifera
Length = 267
Score = 118 bits (283), Expect = 1e-25
Identities = 57/119 (47%), Positives = 73/119 (61%)
Frame = +2
Query: 242 KMNPKNRIAKACDDRPFEGLIITNTEPLSSLSSRSACPRCGKSRMYFCYVCFIPVPALEG 421
K++ R K D PF L ITN L ++ R C C +SR +FCY C++PV E
Sbjct: 12 KLSSLERKQKIIDKTPFCHLKITNARILDTIEGREICKHCCRSRKFFCYSCYLPVIG-EQ 70
Query: 422 KIPYCKLPIKVDIIKHKGEINGKSTAAHAAVLAPRDVTVYTYPDIPDYPTDGKVVWLFP 598
P KLPIK+DIIKH EI+GKSTA HAA+LAP DV ++TYP+ PD + V +FP
Sbjct: 71 YFPKIKLPIKIDIIKHAREIDGKSTAIHAAILAPEDVRIFTYPNFPDILDREETVLIFP 129
>UniRef50_Q9VAL1 Cluster: CG2006-PA; n=5; Diptera|Rep: CG2006-PA -
Drosophila melanogaster (Fruit fly)
Length = 327
Score = 116 bits (278), Expect = 6e-25
Identities = 52/104 (50%), Positives = 70/104 (67%)
Frame = +2
Query: 287 PFEGLIITNTEPLSSLSSRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIK 466
PF + I + L ++ R C C +SR +FCY C +PV LE +P +LP++VDIIK
Sbjct: 15 PFVHMRIADHSALDTIEGRHNCRLCNRSRKFFCYSCCVPVGELEELLPRLELPLQVDIIK 74
Query: 467 HKGEINGKSTAAHAAVLAPRDVTVYTYPDIPDYPTDGKVVWLFP 598
HK EI+GKS+A HAAVLAP V ++T+PDIPDY + VV +FP
Sbjct: 75 HKKEIDGKSSAVHAAVLAPAHVRIHTFPDIPDYREEAGVVLIFP 118
>UniRef50_Q8N5C7 Cluster: DTW domain-containing protein 1; n=20;
Euteleostomi|Rep: DTW domain-containing protein 1 - Homo
sapiens (Human)
Length = 304
Score = 108 bits (260), Expect = 8e-23
Identities = 52/119 (43%), Positives = 74/119 (62%), Gaps = 4/119 (3%)
Frame = +2
Query: 254 KNRIAKACDDRPFEGLIITNTEPLSSL--SSRSACPRCGKSRMYFCYVCFIPVPALE-GK 424
+++ + P + L + + E L S RS C +CG SRM++CY C++PV + +
Sbjct: 24 QSQTTSIASEDPLQNLCLASQEVLQKAQQSGRSKCLKCGGSRMFYCYTCYVPVENVPIEQ 83
Query: 425 IPYCKLPIKVDIIKHKGEINGKSTAAHAAVLAPRDVTVYTYPDIPDY-PTDGKVVWLFP 598
IP KLP+K+DIIKH E +GKSTA HA +LAP V +YTYP IP+Y D +V +FP
Sbjct: 84 IPLVKLPLKIDIIKHPNETDGKSTAIHAKLLAPEFVNIYTYPCIPEYEEKDHEVALIFP 142
>UniRef50_A7SR31 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 231
Score = 99 bits (238), Expect = 4e-20
Identities = 45/88 (51%), Positives = 57/88 (64%)
Frame = +2
Query: 287 PFEGLIITNTEPLSSLSSRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIK 466
PF L I + EPL + R+ CP+C SR Y+CY C+ V +P LPI VDI+K
Sbjct: 4 PFSDLGIASHEPLRG-AERAPCPKCQTSRKYYCYECYTTVGIERSLVPSVTLPITVDIVK 62
Query: 467 HKGEINGKSTAAHAAVLAPRDVTVYTYP 550
H+GE+ GKSTA HAA+LAP VT+Y YP
Sbjct: 63 HRGELAGKSTATHAAILAPVQVTIYNYP 90
>UniRef50_Q5XJ56 Cluster: DTW domain containing 1; n=2; Danio
rerio|Rep: DTW domain containing 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 251
Score = 98.3 bits (234), Expect = 1e-19
Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +2
Query: 335 SSRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEINGKSTAAHAAV 514
+ R C RCG SRM+FCY C V G +P LP+K+DIIKH E +GKSTA A +
Sbjct: 29 AGRMKCTRCGCSRMFFCYSCGALVGLQPGDVPRVTLPVKIDIIKHPNETDGKSTAVQAKL 88
Query: 515 LAPRDVTVYTYPDIPDYPTDGK-VVWLFP 598
LAP+DVT+YTYP IP+ + +V +FP
Sbjct: 89 LAPQDVTIYTYPCIPELDQSAENIVLVFP 117
>UniRef50_O18212 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 557
Score = 79.0 bits (186), Expect = 8e-14
Identities = 35/80 (43%), Positives = 47/80 (58%)
Frame = +2
Query: 341 RSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEINGKSTAAHAAVLA 520
+S CP C +R YFCY C P+P + P KLP VDI+KH E N KS+A H ++A
Sbjct: 344 KSTCPGCKSNRKYFCYDCRTPMPGVF--TPTVKLPCAVDIVKHPMEKNSKSSALHCKIVA 401
Query: 521 PRDVTVYTYPDIPDYPTDGK 580
P V+ YP++ DY D +
Sbjct: 402 PDQTRVFDYPNVHDYSQDSE 421
>UniRef50_Q54C26 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 305
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +2
Query: 338 SRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEINGKSTAAHAAVL 517
SR+ C +C K R YFCY C +P+ E P KLP+ VD+I H E+ KSTA H+ V+
Sbjct: 98 SRTICTKCEKKRKYFCYDCCLPLGDPENS-PKLKLPLNVDVIHHPTELISKSTAIHSKVI 156
Query: 518 APRDVTVYTYP-DIPDYPTDGKVVWLFP 598
A DV +P +IPDY D + + L+P
Sbjct: 157 AYEDVKFIEFPEEIPDYNLD-ETILLYP 183
>UniRef50_UPI0000499814 Cluster: conserved hypothetical protein;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 263
Score = 62.9 bits (146), Expect = 6e-09
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Frame = +2
Query: 290 FEGLIITNTEPLSSLSS--RSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDII 463
F L +++ EPL R CP C K Y+CY C L ++P LPIK+DII
Sbjct: 6 FNKLKLSSKEPLEKADKGGRVTCPLCHKKMKYYCYYCR---RGLIPELPQVNLPIKLDII 62
Query: 464 KHKGEINGKSTAAHAAVLAPRDVTVYTYP-DIPDYPTDGKVVWLFP 598
H E KSTA A ++A D +P +IP Y + + + LFP
Sbjct: 63 HHPTEKVAKSTALTACIVAKDDTRWIEFPNEIPQYDPN-ETILLFP 107
>UniRef50_Q4FWU1 Cluster: Putative uncharacterized protein; n=6;
Trypanosomatidae|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 332
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = +2
Query: 323 LSSLSSRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEINGKSTAA 502
L R CP+C K R+++CY C V E P LP+ V ++ H E+ GKST+
Sbjct: 35 LREQQDRRECPKCHKRRLFYCYDCLTTVHP-ESHPPPLALPLNVYVVLHPNELRGKSTSL 93
Query: 503 HAAVLAPRDVTVYTYPDIPDYPTDGKVVWLFP 598
A+ ++P D+ + YP +P+ + L+P
Sbjct: 94 AASTISP-DLHIAEYPAVPEQLEPELTLVLYP 124
>UniRef50_Q7QRD2 Cluster: GLP_503_17068_15434; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_503_17068_15434 - Giardia lamblia
ATCC 50803
Length = 544
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +2
Query: 323 LSSLSSRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEINGKSTAA 502
L S+ +R+ CP+CG + ++CY C + A + PI V + ++GE N KS +
Sbjct: 18 LLSIRTRAKCPKCGSMQQWYCYFCHLLTNA--PSFSPARPPIPVSFLCYRGEKNSKS-SV 74
Query: 503 HAAVLAPRDVTV 538
H V + +VTV
Sbjct: 75 HGVVTSSENVTV 86
>UniRef50_Q8WVG9 Cluster: DTWD1 protein; n=1; Homo sapiens|Rep:
DTWD1 protein - Homo sapiens (Human)
Length = 109
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 KNRIAKACDDRPFEGLIITNTEPLSSL--SSRSACPRCGKSRMYFCYVCFIPVPALEGKI 427
+++ + P + L + + E L S RS C +CG SRM++CY C++PV +
Sbjct: 24 QSQTTSIASEDPLQNLCLASQEVLQKAQQSGRSKCLKCGGSRMFYCYTCYVPVE----NV 79
Query: 428 PYCKLPIKVDIIKHKGE 478
P ++P+ + H G+
Sbjct: 80 PIEQIPLVKFSLYHLGQ 96
>UniRef50_UPI0000EB084E Cluster: DTW domain containing 1; n=1; Canis
lupus familiaris|Rep: DTW domain containing 1 - Canis
familiaris
Length = 88
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 272 ACDDRPFEGLIITNTEPLSSL--SSRSACPRCGKSRMYFCYVCFIPV 406
A +D P + L + + E L S RS C +CG SRM++CY C++PV
Sbjct: 31 AAED-PLQNLRLASQEVLQKAQQSGRSKCLKCGGSRMFYCYTCYVPV 76
>UniRef50_UPI00006CF9AD Cluster: DTW domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: DTW domain containing
protein - Tetrahymena thermophila SB210
Length = 338
Score = 42.7 bits (96), Expect = 0.006
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = +2
Query: 314 TEPLSSLSSRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEINGKS 493
+E L S R CP C K +C C + V +IP +LP ++ I+ H E KS
Sbjct: 73 SEFLKEDSQRQECPNCKKKSKIYCADC-LTVLCEPSQIPKVQLPFRLTIVHHDQEKTKKS 131
Query: 494 TAAHAAVLA---PRDVTVYTYP--DIPDYPTDGKVVWLFP 598
+A +L + + YP +IP++ D ++ L+P
Sbjct: 132 SALPVKLLIENNEENCKIIHYPSHEIPEFDPDTTLI-LYP 170
>UniRef50_Q4SHM7 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 5 SCAF14581, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 230
Score = 38.3 bits (85), Expect = 0.14
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 281 DRPFEGLIITNTEPLSSLSSRSA--CPRCGKSRMYFCYVCFIPVPALEGKIPYCKL 442
+RP + L + + L R C +CG SR +FCY C + V + +P K+
Sbjct: 1 ERPLQSLKLASHAVLEEAQQRGRLKCSKCGGSRKFFCYTCCLLVGVTQEDVPLIKV 56
>UniRef50_A4XIE4 Cluster: Peptidase A24A domain protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Peptidase A24A domain protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 258
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 344 SACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPI 448
S CP CGK +F + + L+GK YCK PI
Sbjct: 35 SHCPNCGKRIRWFDLIPVLSFIILKGKCRYCKSPI 69
>UniRef50_Q1RL49 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 455
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +2
Query: 263 IAKACDDRPFEGLIITNTEPL----SSLSSRSACPR--CGKSRMYFCYVC 394
+ KA DDR + + NT+P +S+ C + C K R YFC++C
Sbjct: 367 LCKALDDRATQAWMNNNTKPCPGCNASIEKLDGCNKMTCYKCRAYFCWIC 416
>UniRef50_Q5KJP4 Cluster: Shuttle craft like transcriptional
regulator, putative; n=1; Filobasidiella neoformans|Rep:
Shuttle craft like transcriptional regulator, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1086
Score = 33.5 bits (73), Expect = 3.9
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 314 TEPLSSLSSRSAC-PRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEINGK 490
+ P +SLS+ +C CG++R + C P+P G P C + + V H I K
Sbjct: 397 SHPATSLSAPHSCGDSCGRTRQKCAHPC--PLPCHPGPCPPCNIALIVPCPSHSIPITVK 454
Query: 491 --STAAHAAVLAP 523
S ++ A L+P
Sbjct: 455 CSSATSNNAALSP 467
>UniRef50_Q55WK2 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1219
Score = 33.5 bits (73), Expect = 3.9
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 314 TEPLSSLSSRSAC-PRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEINGK 490
+ P +SLS+ +C CG++R + C P+P G P C + + V H I K
Sbjct: 551 SHPATSLSAPHSCGDSCGRTRQKCAHPC--PLPCHPGPCPPCNIALIVPCPSHSIPITVK 608
Query: 491 --STAAHAAVLAP 523
S ++ A L+P
Sbjct: 609 CSSATSNNAALSP 621
>UniRef50_A2F991 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 732
Score = 33.1 bits (72), Expect = 5.1
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 387 MFALFQYQHLKEKYLTVNYQ*KWILSNTKERLMVKALQPMLLFLLHGMSQCTHIQI 554
+F +F + K K +NY KW L T++ L P +F +HG + HI +
Sbjct: 447 VFVIFMAKGFKGKNPLINYTNKWPL--TQDSLKFVQKMPATMFFMHGNDEIGHINM 500
>UniRef50_Q3YR25 Cluster: Putative uncharacterized protein; n=3;
canis group|Rep: Putative uncharacterized protein -
Ehrlichia canis (strain Jake)
Length = 474
Score = 32.7 bits (71), Expect = 6.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 372 ECTFVMFALFQYQHLKEKYLTVNYQ*KWILSNTKERLMVKALQPMLLFLLHGMSQCT 542
+ T + L YQ+ KEK+ T Y I++N K+ + +QP L H ++Q T
Sbjct: 238 QLTKLHVTLKDYQNRKEKFSTAKYPWYSIINNIKKVIYTHIIQPKLTKKAHILTQIT 294
>UniRef50_Q2RI80 Cluster: Peptidase A24A-like; n=2; Bacteria|Rep:
Peptidase A24A-like - Moorella thermoacetica (strain
ATCC 39073)
Length = 247
Score = 32.3 bits (70), Expect = 8.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 341 RSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPI 448
RS CP CG+ ++ + + L G+ YC LPI
Sbjct: 33 RSHCPTCGRELAWYDLIPVLSYLFLRGRCRYCHLPI 68
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,564,266
Number of Sequences: 1657284
Number of extensions: 9442657
Number of successful extensions: 23266
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 22640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23240
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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