Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j10f
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032535-1|AAH32535.1|  304|Homo sapiens DTW domain containing 1...   108   1e-23
AF168717-1|AAF87319.1|  135|Homo sapiens x 009 protein protein.       106   7e-23
BC093073-1|AAH93073.1|  217|Homo sapiens DTWD1 protein protein.        68   3e-11
BC018028-1|AAH18028.1|  109|Homo sapiens DTWD1 protein protein.        47   4e-05
AL121586-10|CAI95699.1|  153|Homo sapiens chromosome 20 open rea...    31   4.1  

>BC032535-1|AAH32535.1|  304|Homo sapiens DTW domain containing 1
           protein.
          Length = 304

 Score =  108 bits (260), Expect = 1e-23
 Identities = 52/119 (43%), Positives = 74/119 (62%), Gaps = 4/119 (3%)
 Frame = +2

Query: 254 KNRIAKACDDRPFEGLIITNTEPLSSL--SSRSACPRCGKSRMYFCYVCFIPVPALE-GK 424
           +++      + P + L + + E L     S RS C +CG SRM++CY C++PV  +   +
Sbjct: 24  QSQTTSIASEDPLQNLCLASQEVLQKAQQSGRSKCLKCGGSRMFYCYTCYVPVENVPIEQ 83

Query: 425 IPYCKLPIKVDIIKHKGEINGKSTAAHAAVLAPRDVTVYTYPDIPDY-PTDGKVVWLFP 598
           IP  KLP+K+DIIKH  E +GKSTA HA +LAP  V +YTYP IP+Y   D +V  +FP
Sbjct: 84  IPLVKLPLKIDIIKHPNETDGKSTAIHAKLLAPEFVNIYTYPCIPEYEEKDHEVALIFP 142


>AF168717-1|AAF87319.1|  135|Homo sapiens x 009 protein protein.
          Length = 135

 Score =  106 bits (254), Expect = 7e-23
 Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
 Frame = +2

Query: 254 KNRIAKACDDRPFEGLIITNTEPLSSL--SSRSACPRCGKSRMYFCYVCFIPVPALE-GK 424
           +++      + P + L + + E L     S RS C +CG SRM++CY C++PV  +   +
Sbjct: 24  QSQTTSIASEDPLQNLCLASQEVLQKAQQSGRSKCLKCGGSRMFYCYTCYVPVENVPIEQ 83

Query: 425 IPYCKLPIKVDIIKHKGEINGKSTAAHAAVLAPRDVTVYTYPDIPDYPTDG 577
           IP  KLP+K+DIIKH  E +GKSTA HA +LAP  V +YTYP IP+Y   G
Sbjct: 84  IPLVKLPLKIDIIKHPNETDGKSTAIHAKLLAPEFVNIYTYPCIPEYERKG 134


>BC093073-1|AAH93073.1|  217|Homo sapiens DTWD1 protein protein.
          Length = 217

 Score = 67.7 bits (158), Expect = 3e-11
 Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 440 LPIKVDIIKHKGEINGKSTAAHAAVLAPRDVTVYTYPDIPDY-PTDGKVVWLFP 598
           LP+K+DIIKH  E +GKSTA HA +LAP  V +YTYP IP+Y   D +V  +FP
Sbjct: 2   LPLKIDIIKHPNETDGKSTAIHAKLLAPEFVNIYTYPCIPEYEEKDHEVALIFP 55


>BC018028-1|AAH18028.1|  109|Homo sapiens DTWD1 protein protein.
          Length = 109

 Score = 47.2 bits (107), Expect = 4e-05
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = +2

Query: 254 KNRIAKACDDRPFEGLIITNTEPLSSL--SSRSACPRCGKSRMYFCYVCFIPVPALEGKI 427
           +++      + P + L + + E L     S RS C +CG SRM++CY C++PV      +
Sbjct: 24  QSQTTSIASEDPLQNLCLASQEVLQKAQQSGRSKCLKCGGSRMFYCYTCYVPVE----NV 79

Query: 428 PYCKLPIKVDIIKHKGE 478
           P  ++P+    + H G+
Sbjct: 80  PIEQIPLVKFSLYHLGQ 96


>AL121586-10|CAI95699.1|  153|Homo sapiens chromosome 20 open
           reading frame 173 protein.
          Length = 153

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 538 HCDIPWSKNSSMGCSAFTINLS 473
           HCD PW  +   GC + T+N S
Sbjct: 43  HCDCPWFSSGKCGCPSETLNCS 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,168,971
Number of Sequences: 237096
Number of extensions: 1421505
Number of successful extensions: 2638
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2636
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)