Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j10f
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4379|AAF56893.2|  327|Drosophila melanogaster CG2006-PA...   116   3e-26
BT025822-1|ABF85722.1|  110|Drosophila melanogaster IP05279p pro...    31   1.6  
AE014296-2882|AAF49362.1|  110|Drosophila melanogaster CG13723-P...    31   1.6  
AY071533-1|AAL49155.1|  371|Drosophila melanogaster RE57556p pro...    30   2.7  
AE014134-2355|AAF53307.1|  371|Drosophila melanogaster CG9267-PA...    30   2.7  

>AE014297-4379|AAF56893.2|  327|Drosophila melanogaster CG2006-PA
           protein.
          Length = 327

 Score =  116 bits (278), Expect = 3e-26
 Identities = 52/104 (50%), Positives = 70/104 (67%)
 Frame = +2

Query: 287 PFEGLIITNTEPLSSLSSRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIK 466
           PF  + I +   L ++  R  C  C +SR +FCY C +PV  LE  +P  +LP++VDIIK
Sbjct: 15  PFVHMRIADHSALDTIEGRHNCRLCNRSRKFFCYSCCVPVGELEELLPRLELPLQVDIIK 74

Query: 467 HKGEINGKSTAAHAAVLAPRDVTVYTYPDIPDYPTDGKVVWLFP 598
           HK EI+GKS+A HAAVLAP  V ++T+PDIPDY  +  VV +FP
Sbjct: 75  HKKEIDGKSSAVHAAVLAPAHVRIHTFPDIPDYREEAGVVLIFP 118


>BT025822-1|ABF85722.1|  110|Drosophila melanogaster IP05279p
           protein.
          Length = 110

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +1

Query: 100 SFYINITYFYV*IL---YCIVMFKWCYKINNLTLNYHRIREIYSLA 228
           +FY  I YFYV +    YC+V+++  ++I  + L++ RI  +YS A
Sbjct: 15  NFYHAI-YFYVSLFSMSYCVVLWQVRHRIYQMDLSWERISLVYSCA 59


>AE014296-2882|AAF49362.1|  110|Drosophila melanogaster CG13723-PA
           protein.
          Length = 110

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +1

Query: 100 SFYINITYFYV*IL---YCIVMFKWCYKINNLTLNYHRIREIYSLA 228
           +FY  I YFYV +    YC+V+++  ++I  + L++ RI  +YS A
Sbjct: 15  NFYHAI-YFYVSLFSMSYCVVLWQVRHRIYQMDLSWERISLVYSCA 59


>AY071533-1|AAL49155.1|  371|Drosophila melanogaster RE57556p
           protein.
          Length = 371

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 24/87 (27%), Positives = 48/87 (55%)
 Frame = +3

Query: 27  FIVAKLIVK*IKCTTFLECSV*KYIILYKYHIFLCLDIVLYCHV*MVLQNKQFNIELP*N 206
           + +A+L+ + +   T+L  ++  +I LY   I LC  I++  ++  + + K+F +E+P N
Sbjct: 263 YYLAQLLGREVGLLTWLRYTI--WIPLYPMGI-LCEGIIVLRNIPYIEETKRFTVEMP-N 318

Query: 207 T*NL*FSFILKER*TLKIVSLRLVMTG 287
             N+ F  +L     LKI  + L++ G
Sbjct: 319 PWNITFDMVL----FLKIYLMLLIIPG 341


>AE014134-2355|AAF53307.1|  371|Drosophila melanogaster CG9267-PA
           protein.
          Length = 371

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 24/87 (27%), Positives = 48/87 (55%)
 Frame = +3

Query: 27  FIVAKLIVK*IKCTTFLECSV*KYIILYKYHIFLCLDIVLYCHV*MVLQNKQFNIELP*N 206
           + +A+L+ + +   T+L  ++  +I LY   I LC  I++  ++  + + K+F +E+P N
Sbjct: 263 YYLAQLLGREVGLLTWLRYTI--WIPLYPMGI-LCEGIIVLRNIPYIEETKRFTVEMP-N 318

Query: 207 T*NL*FSFILKER*TLKIVSLRLVMTG 287
             N+ F  +L     LKI  + L++ G
Sbjct: 319 PWNITFDMVL----FLKIYLMLLIIPG 341


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,566,427
Number of Sequences: 53049
Number of extensions: 425428
Number of successful extensions: 1059
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)