Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j09r
(733 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.5
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.5
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.5
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.5
AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory recept... 23 2.5
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 3.4
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 3.4
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 22 5.9
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 22 5.9
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 22 5.9
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 22 5.9
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 22 5.9
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 229 TVALSLSAFVSLYVEIAPQTA 291
T+ LSL+ F++L E PQ +
Sbjct: 248 TILLSLTVFLNLVAETLPQVS 268
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 229 TVALSLSAFVSLYVEIAPQTA 291
T+ LSL+ F++L E PQ +
Sbjct: 248 TILLSLTVFLNLVAETLPQVS 268
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 229 TVALSLSAFVSLYVEIAPQTA 291
T+ LSL+ F++L E PQ +
Sbjct: 248 TILLSLTVFLNLVAETLPQVS 268
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/66 (15%), Positives = 27/66 (40%)
Frame = -3
Query: 275 ISTYNETNADKLKATVVQPSIVSKQLKVEGFQVNRFADRNMEGIQKNLAWVKSGQLKYKE 96
I TY N + + +Q S+ K+E + ++ D + +++ + K
Sbjct: 1089 ICTYKADNKENEQLRKIQESLRDLNRKIESLEKMQYPDLRSPAVSNVTTFMEGSKATVKN 1148
Query: 95 HLTEGF 78
++ + +
Sbjct: 1149 NVEDNY 1154
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/66 (15%), Positives = 27/66 (40%)
Frame = -3
Query: 275 ISTYNETNADKLKATVVQPSIVSKQLKVEGFQVNRFADRNMEGIQKNLAWVKSGQLKYKE 96
I TY N + + +Q S+ K+E + ++ D + +++ + K
Sbjct: 1089 ICTYKADNKENEQLRKIQESLRDLNRKIESLEKMQYPDLRSPAVSNVTTFMEGSKATVKN 1148
Query: 95 HLTEGF 78
++ + +
Sbjct: 1149 NVEDNY 1154
>AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory receptor
candidate 35 protein.
Length = 251
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 446 EAGFDHVANYKTADIPTFL 390
EA FD +A Y+T ++ F+
Sbjct: 190 EASFDDLATYETDEVQIFI 208
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 536 PQLLPHPILLQFHPVLV 586
P L PHP L HP +V
Sbjct: 234 PGLSPHPPHLSSHPAIV 250
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 536 PQLLPHPILLQFHPVLV 586
P L PHP L HP +V
Sbjct: 126 PGLSPHPPHLSSHPAIV 142
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 725 PENEKLCQQKPYLYKLPDFEHLPVSLG 645
PE LC+ L + + H+P+ +G
Sbjct: 288 PEGAFLCEDPVDLLESGRYNHVPIMIG 314
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 725 PENEKLCQQKPYLYKLPDFEHLPVSLG 645
PE LC+ L + + H+P+ +G
Sbjct: 288 PEGAFLCEDPVDLLESGRYNHVPIMIG 314
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 725 PENEKLCQQKPYLYKLPDFEHLPVSLG 645
PE LC+ L + + H+P+ +G
Sbjct: 288 PEGAFLCEDPVDLLESGRYNHVPIMIG 314
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 725 PENEKLCQQKPYLYKLPDFEHLPVSLG 645
PE LC+ L + + H+P+ +G
Sbjct: 288 PEGAFLCEDPVDLLESGRYNHVPIMIG 314
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 725 PENEKLCQQKPYLYKLPDFEHLPVSLG 645
PE LC+ L + + H+P+ +G
Sbjct: 287 PEGAFLCEDPVDLLESGRYNHVPIMIG 313
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,587
Number of Sequences: 336
Number of extensions: 4247
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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