Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j09r
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787 170 8e-43
12_01_0756 + 6869100-6869327,6869943-6870123,6870233-6870399,687... 156 1e-38
12_01_0762 + 6915299-6915532,6916043-6916220,6916490-6916656,691... 155 3e-38
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 152 2e-37
12_01_0764 + 6934570-6934726,6935150-6935316,6935408-6935490,693... 152 3e-37
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259 145 4e-35
12_01_0760 + 6910325-6910558,6911305-6911455,6911949-6912115,691... 144 6e-35
01_06_1628 + 38745964-38746480,38747116-38747282,38747325-387474... 130 1e-30
12_01_0759 + 6894556-6894628,6894653-6894738,6895039-6895121,689... 119 3e-27
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 66 4e-11
01_06_1630 + 38753016-38753209,38753904-38754039,38754291-387544... 54 9e-08
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 33 0.23
02_02_0618 - 12190727-12191698 31 1.2
06_02_0036 - 10844876-10846173,10846490-10847012 29 5.0
>04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787
Length = 345
Score = 170 bits (414), Expect = 8e-43
Identities = 93/219 (42%), Positives = 126/219 (57%), Gaps = 1/219 (0%)
Frame = -3
Query: 662 LPVSLGLGVCGRVGNTAYFGFSQICQPKPGETXXXXXXXXXXXXXXGQIAKIMGCVVIGF 483
LP+S G+ G G TAY GF +IC P+ GE GQ AK+MGC V+G
Sbjct: 127 LPLSYYTGLLGMAGFTAYVGFHEICAPREGERVYVSAASGAVGQLVGQFAKLMGCYVVGS 186
Query: 482 AGTDEKCQWLIQEAGFDHVANYKT-ADIPTFLKGTAPNGVDCYFDNVGGELSSVVLSHMR 306
AG+D+K + L ++ GFD NYK +D+ LK P G+D YF+NVGG + VL +MR
Sbjct: 187 AGSDDKVRLLREKFGFDDAFNYKKESDLSAALKRCFPEGIDIYFENVGGAMLDAVLLNMR 246
Query: 305 TFGRVAVCGAISTYNETNADKLKATVVQPSIVSKQLKVEGFQVNRFADRNMEGIQKNLAW 126
GRVA CG IS YN + D + +IV+K+L++EGF V+ R E +K +
Sbjct: 247 VRGRVAACGMISQYNLEHPDPVHNLT---AIVTKRLRIEGFIVSDHYARYREYEEKAARY 303
Query: 125 VKSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGKSIVKV 9
VK G++ Y E + EG E+ A IGLF G N+GK +V V
Sbjct: 304 VKEGKIAYVEDVAEGLENAPAALIGLFSGRNVGKQVVVV 342
>12_01_0756 +
6869100-6869327,6869943-6870123,6870233-6870399,
6870523-6870605,6870716-6871094
Length = 345
Score = 156 bits (379), Expect = 1e-38
Identities = 86/231 (37%), Positives = 128/231 (55%), Gaps = 1/231 (0%)
Frame = -3
Query: 698 KPYLYKLPDFEHLPVSLGLGVCGRVGNTAYFGFSQICQPKPGETXXXXXXXXXXXXXXGQ 519
KPYL+K+ ++ P+S GV G G TAY GF ++ +PK G+ GQ
Sbjct: 116 KPYLHKI-NYPEFPLSYYTGVLGIAGLTAYGGFFEVSKPKKGDYVFVSAASGAVGQIVGQ 174
Query: 518 IAKIMGCVVIGFAGTDEKCQWLIQEAGFDHVANYKTA-DIPTFLKGTAPNGVDCYFDNVG 342
+AKI GC V+G AG+DEK + L + GF NYK D+ LK P+G+D YFDNVG
Sbjct: 175 LAKITGCYVVGSAGSDEKVKLLKTKFGFHDAFNYKKELDLEGALKRCFPDGIDIYFDNVG 234
Query: 341 GELSSVVLSHMRTFGRVAVCGAISTYNETNADKLKATVVQPSIVSKQLKVEGFQVNRFAD 162
G + VL +MR G++ +CG IS YN D ++ + +K L++EGF V+ +
Sbjct: 235 GAMLDAVLPNMRIGGKITICGMISQYNLERPDGVRNLFY---LFAKSLRMEGFLVSNYIA 291
Query: 161 RNMEGIQKNLAWVKSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGKSIVKV 9
++ +++ G++ Y E + EG E+ A IGLF G N+GK +V +
Sbjct: 292 IYHRYEKEMAGYLREGKVVYVEDIVEGLEAAPAALIGLFTGRNVGKQLVTI 342
>12_01_0762 +
6915299-6915532,6916043-6916220,6916490-6916656,
6916770-6916852,6916940-6917318
Length = 346
Score = 155 bits (377), Expect = 3e-38
Identities = 87/219 (39%), Positives = 122/219 (55%), Gaps = 1/219 (0%)
Frame = -3
Query: 662 LPVSLGLGVCGRVGNTAYFGFSQICQPKPGETXXXXXXXXXXXXXXGQIAKIMGCVVIGF 483
LP+S G+ G G TAY GF ++ +PK GE GQ+AKI+GC V+G
Sbjct: 128 LPLSYYTGILGMPGLTAYAGFFEVSKPKKGEYVFISAASGAVGQIVGQLAKIIGCYVVGS 187
Query: 482 AGTDEKCQWLIQEAGFDHVANYKTA-DIPTFLKGTAPNGVDCYFDNVGGELSSVVLSHMR 306
AG+DEK L + GF+ NYK D+ L+ P G+D YF+NVGGE VL +MR
Sbjct: 188 AGSDEKVSLLKTKFGFNDAFNYKKEPDLEAALRRYFPEGIDIYFENVGGETLDAVLPNMR 247
Query: 305 TFGRVAVCGAISTYNETNADKLKATVVQPSIVSKQLKVEGFQVNRFADRNMEGIQKNLAW 126
GR+A CG IS YN + +K IV+K+L++EGF V F DR + + +
Sbjct: 248 LGGRIAACGMISQYNLERPEGVKNLFY---IVTKRLRMEGFLVFDFYDRYYQFEDEMARY 304
Query: 125 VKSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGKSIVKV 9
+K G++ Y E + EG ++ A I LF G N+GK +V +
Sbjct: 305 LKEGKVAYVEDVVEGLDAAPAALIKLFTGRNVGKQLVAI 343
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 152 bits (369), Expect = 2e-37
Identities = 86/226 (38%), Positives = 121/226 (53%), Gaps = 1/226 (0%)
Frame = -3
Query: 683 KLPDFEHLPVSLGLGVCGRVGNTAYFGFSQICQPKPGETXXXXXXXXXXXXXXGQIAKIM 504
KL + LP+S L G G TAY G ++ +P+ GE GQ AK+
Sbjct: 119 KLAASDDLPLSHHLSALGTSGMTAYAGLYEVGRPEAGEKVFVSAASGSVGSLVGQFAKLA 178
Query: 503 GCVVIGFAGTDEKCQWLIQEAGFDHVANYKTA-DIPTFLKGTAPNGVDCYFDNVGGELSS 327
GC V+G AGT+ K L + GFD NYK D+ + LK P+G+D YFDNVGGE
Sbjct: 179 GCYVVGCAGTNAKVDLLKNKLGFDDAFNYKDEPDMKSALKRYFPDGIDIYFDNVGGETLE 238
Query: 326 VVLSHMRTFGRVAVCGAISTYNETNADKLKATVVQPSIVSKQLKVEGFQVNRFADRNMEG 147
L++M T+GRVA+CG IS Y + +A ++ K++ + GF F R E
Sbjct: 239 AALANMNTYGRVALCGVISEYTDAGH---RAVPDLLEVIYKRITIRGFFAWDFLTRFAEF 295
Query: 146 IQKNLAWVKSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGKSIVKV 9
W++ G+++ E +++G ESV AF LF GDNIGK +VK+
Sbjct: 296 TGVISDWIRQGKVQVIEDISDGLESVPSAFAALFSGDNIGKKMVKL 341
>12_01_0764 +
6934570-6934726,6935150-6935316,6935408-6935490,
6935588-6935966
Length = 261
Score = 152 bits (368), Expect = 3e-37
Identities = 86/228 (37%), Positives = 126/228 (55%), Gaps = 1/228 (0%)
Frame = -3
Query: 689 LYKLPDFEHLPVSLGLGVCGRVGNTAYFGFSQICQPKPGETXXXXXXXXXXXXXXGQIAK 510
L+K+ + LP+S G+ G G TAY GF ++ +PK GE GQ+AK
Sbjct: 35 LFKI-NHPELPLSYYTGILGMPGLTAYGGFFEVAKPKKGEYVFISSAFGAVGQIVGQLAK 93
Query: 509 IMGCVVIGFAGTDEKCQWLIQEAGFDHVANYKTA-DIPTFLKGTAPNGVDCYFDNVGGEL 333
I GC V+G AG+DEK L + GFD NYK D+ LK P+G+D YF+NVGG +
Sbjct: 94 ITGCYVVGSAGSDEKVNLLKTKFGFDDAFNYKKELDLEAALKRCFPDGIDIYFENVGGAM 153
Query: 332 SSVVLSHMRTFGRVAVCGAISTYNETNADKLKATVVQPSIVSKQLKVEGFQVNRFADRNM 153
VL +MR GR+A CG IS YN + + + IV+K+L+++GF V F D
Sbjct: 154 LDAVLPNMRVAGRIAACGMISQYNLEQPEGVYNMI---CIVTKRLRMQGFLVFDFYDMYY 210
Query: 152 EGIQKNLAWVKSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGKSIVKV 9
+ ++ ++K G++ Y E + EG ++ A + LF +IGK +V V
Sbjct: 211 QIEEQIAGYLKEGKVAYTEDVVEGLDAAPAALVKLFTSSSIGKQLVAV 258
>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
Length = 359
Score = 145 bits (351), Expect = 4e-35
Identities = 94/242 (38%), Positives = 130/242 (53%), Gaps = 4/242 (1%)
Frame = -3
Query: 722 ENEKLCQQKPYLYKLPDFEHLPVSLGLGVCGRVGNTAYFGFSQICQPKPGETXXXXXXXX 543
E L Q L+K+ + LP+S GV G G TAY F ++ +PK GET
Sbjct: 121 EEYSLITQPETLHKI-NHPDLPLSYYTGVLGVTGLTAYAAFFEVGKPKKGETVFVSAASG 179
Query: 542 XXXXXXGQIAKIMGCVVIGFAGTDEKCQWLIQEAGFDHVANYK--TADIPTFLKGTAPNG 369
GQ+AKI GC V+G AG+DEK L + GF NYK + D+ L+ P+G
Sbjct: 180 AVGQIVGQLAKIAGCYVVGSAGSDEKVTLLKTKFGFHDAFNYKKESNDLTGALRRCFPDG 239
Query: 368 VDCYFDNVGGELSSVVLSHMRTFGRVAVCGAISTYNETNADKLKATVVQPSIVSKQLKVE 189
+D YFDNVGG L +MR GRV VCG IS YN + + V+Q I+SK ++VE
Sbjct: 240 IDIYFDNVGGATLDAALVNMRRGGRVVVCGMISQYNLQEPEGVH-NVIQ--ILSKTIRVE 296
Query: 188 GFQV-NRFADRNMEGIQKNLA-WVKSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGKSIV 15
GF V N F M + +A ++K G++ + + +G E +A IG+F G N+GK +V
Sbjct: 297 GFAVFNHFGLYPM--FEDEMARYLKEGKVTVLQDVVKGIEKASEALIGMFSGRNVGKLLV 354
Query: 14 KV 9
V
Sbjct: 355 AV 356
>12_01_0760 +
6910325-6910558,6911305-6911455,6911949-6912115,
6912227-6912309,6912395-6912773
Length = 337
Score = 144 bits (349), Expect = 6e-35
Identities = 84/228 (36%), Positives = 122/228 (53%), Gaps = 1/228 (0%)
Frame = -3
Query: 689 LYKLPDFEHLPVSLGLGVCGRVGNTAYFGFSQICQPKPGETXXXXXXXXXXXXXXGQIAK 510
L+K+ + LP+S G+ G G TAY GF + +PK GE GQ+AK
Sbjct: 111 LFKI-NHPELPLSYYTGILGMPGLTAYAGFFDVPKPKKGEYVFISGASGAVGQVVGQLAK 169
Query: 509 IMGCVVIGFAGTDEKCQWLIQEAGFDHVANYKTA-DIPTFLKGTAPNGVDCYFDNVGGEL 333
I GC VIG AG DEK L + GFD NYK D+ L+ P G+D Y++NVGG++
Sbjct: 170 ITGCYVIGSAGYDEKVNLLKSKFGFDDAFNYKKEQDLEAALRRYFPEGIDIYYENVGGKM 229
Query: 332 SSVVLSHMRTFGRVAVCGAISTYNETNADKLKATVVQPSIVSKQLKVEGFQVNRFADRNM 153
VL +M GR+ CG IS YN + ++ IV+K+L++EGF V + DR
Sbjct: 230 LDAVLPNMSLGGRIVACGMISQYNLEQPEGVRNLYY---IVTKRLRMEGFHVFDYYDRYY 286
Query: 152 EGIQKNLAWVKSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGKSIVKV 9
++ ++K ++ Y E + EG ++ A I LF G ++GK +V V
Sbjct: 287 RFEEEMAGYLKEEKVSYVEDVVEGLDTAPAALIRLFTGRSVGKQLVAV 334
>01_06_1628 +
38745964-38746480,38747116-38747282,38747325-38747440,
38747718-38748114
Length = 398
Score = 130 bits (313), Expect = 1e-30
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 12/251 (4%)
Frame = -3
Query: 722 ENEKLCQQKPYLYKLPDFEHLPVSLGLGVCGRVGNTAYFGFSQICQPKPGETXXXXXXXX 543
E L + L K+ + +P+S LG+ G G TAY GF +IC PK GE
Sbjct: 144 EEYSLIDRPEQLSKIQQSD-IPLSYHLGLLGMPGFTAYAGFYEICSPKKGEFVFVSAASG 202
Query: 542 XXXXXXGQIAKIMGCVVIGFAGTDEKC-----------QWLIQEAGFDHVANYKTA-DIP 399
GQ+AK+ GC V+G AGT++K + L + GFD NYK D+
Sbjct: 203 AVGQIVGQLAKLHGCYVVGSAGTNQKMHHSGFTAMFQVELLKGKFGFDAAFNYKEEPDLT 262
Query: 398 TFLKGTAPNGVDCYFDNVGGELSSVVLSHMRTFGRVAVCGAISTYNETNADKLKATVVQP 219
LK P G+D YF+NVGG + VL +MRT GR+AVCG +S T+ +
Sbjct: 263 AALKRYFPEGIDIYFENVGGPMLDAVLLNMRTHGRIAVCGMVSQNALTDPVGIHNIF--- 319
Query: 218 SIVSKQLKVEGFQVNRFADRNMEGIQKNLAWVKSGQLKYKEHLTEGFESVIDAFIGLFRG 39
+V K+++++GF + + + + G++ Y E ++ G E+ A +GLF G
Sbjct: 320 CLVPKRIRMQGFIQSDHLHMFPQFVSDMAKHYRDGKIVYVEDMSIGLENAPAALVGLFSG 379
Query: 38 DNIGKSIVKVT 6
N+GK +V V+
Sbjct: 380 KNVGKKVVCVS 390
>12_01_0759 +
6894556-6894628,6894653-6894738,6895039-6895121,
6895278-6895650
Length = 204
Score = 119 bits (286), Expect = 3e-27
Identities = 69/209 (33%), Positives = 112/209 (53%), Gaps = 1/209 (0%)
Frame = -3
Query: 632 GRVGNTAYFGFSQICQPKPGETXXXXXXXXXXXXXXGQIAKIMGCVVIGFAGTDEKCQWL 453
G G TAY GF ++ +PK GQ+AKI GC V+G AG+D+K L
Sbjct: 6 GMHGLTAYVGFFEMSKPKKA--------CGAIGQIVGQLAKIKGCYVVGSAGSDDKVNLL 57
Query: 452 IQEAGFDHVANYKT-ADIPTFLKGTAPNGVDCYFDNVGGELSSVVLSHMRTFGRVAVCGA 276
+ GFD NYK D+ LK P G+D F+NVGG + VL +MR GR+ +CG
Sbjct: 58 KTKFGFDDAFNYKKETDLEAALKRCFPEGIDIDFENVGGAMLDAVLPNMRLGGRITMCGM 117
Query: 275 ISTYNETNADKLKATVVQPSIVSKQLKVEGFQVNRFADRNMEGIQKNLAWVKSGQLKYKE 96
IS Y+ + ++ + I++K+L++EGF + + ++ +++ G++ Y E
Sbjct: 118 ISQYHLERPEGVRNLMY---IITKRLRMEGFVIFDSIAVYRQFEEEMAGYLREGKVTYLE 174
Query: 95 HLTEGFESVIDAFIGLFRGDNIGKSIVKV 9
+ +G ++ A IG++ G N+GK +V +
Sbjct: 175 DIVQGLDAAPAALIGIYNGLNVGKQLVAI 203
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 65.7 bits (153), Expect = 4e-11
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 1/174 (0%)
Frame = -3
Query: 623 GNTAYFGFSQICQPKPGETXXXXXXXXXXXXXXGQIAKIMGCVVIGFAGTDEKCQWLIQE 444
G TA + Q G+ Q+AK+ G V+ G K L+
Sbjct: 417 GLTASIALEKAGQMASGQVVLVTAAAGGTGQFAVQLAKLAGNKVVATCGGKCKAA-LLSS 475
Query: 443 AGFDHVANYKTADIPTFLKGTAPNGVDCYFDNVGGELSSVVLSHMRTFGRVAVCGAISTY 264
G D V NY+ I LK P G D +++VGGE+ + L+ + GR+ V G IS Y
Sbjct: 476 LGVDRVINYQNEKIKDVLKKEFPRGADIIYESVGGEMFDLCLNALAVHGRLIVIGMISQY 535
Query: 263 NETNADKLK-ATVVQPSIVSKQLKVEGFQVNRFADRNMEGIQKNLAWVKSGQLK 105
+ K + T + I++K V GF + ++A + + K SG+LK
Sbjct: 536 QGEHGWKPRNYTGLCDKILAKSQTVAGFFLIQYAHLWQDHLDKLFDLYASGKLK 589
>01_06_1630 +
38753016-38753209,38753904-38754039,38754291-38754404,
38755053-38755112,38755223-38755252,38755523-38756206
Length = 405
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -3
Query: 377 PNGVDCYFDNVGGELSSVVLSHMRTFGRVAVCGAIS 270
P G+D YF+NVGG + VVL +MRT GR+AVCG +S
Sbjct: 68 PEGIDIYFENVGGPMLDVVLLNMRTHGRIAVCGMVS 103
Score = 35.5 bits (78), Expect = 0.044
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 122 KSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGK 24
+ G++ Y E ++ G E+ AF+GLF G N+GK
Sbjct: 115 RDGKIVYVEDMSIGLENAPAAFVGLFSGKNVGK 147
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 33.1 bits (72), Expect = 0.23
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Frame = -3
Query: 521 QIAKIMGCVVIGFAGTDEKCQWLIQEAGFDHVANYKTADIPTFLKGTAPN---------- 372
QIAK +G V AG++EK + G D NYKT D +K
Sbjct: 161 QIAKHLGIKVFVTAGSEEKLA-ACKGLGADVCINYKTEDFVARVKEETNGKVTLDMEVYL 219
Query: 371 -GVDCYFDNVGGELSSVVLSHMRTFGRVAVCG 279
GVD DN+GG L+ + GR+ + G
Sbjct: 220 PGVDVILDNIGGLYLQRNLNSLAVDGRLFIIG 251
>02_02_0618 - 12190727-12191698
Length = 323
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 279 ATDRNSTKSSHVR*NYTAELSTHIIKIAVYTVGSSTFEECRYVSS 413
A D N+T SS + T+ ++H+IKI YTV E +VSS
Sbjct: 2 ANDTNNTSSSVIATETTS--ASHVIKIDGYTVTKDLMENGEFVSS 44
>06_02_0036 - 10844876-10846173,10846490-10847012
Length = 606
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +3
Query: 339 STHIIKIAVYTVGSSTFEECRYVSSFIICYVIKASFLNQPLAFFICAC 482
S H+ K+ ++ + + E+C ++ +I +IK + IC C
Sbjct: 263 SNHVDKLKLFGMSINVLEQCEHLEGDLIRLIIKEKLMPWNSGMGICLC 310
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,514,329
Number of Sequences: 37544
Number of extensions: 417495
Number of successful extensions: 980
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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