Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j09r
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46935-8|CAL36511.1| 365|Caenorhabditis elegans Hypothetical pr... 115 3e-26
Z46935-7|CAL36510.1| 373|Caenorhabditis elegans Hypothetical pr... 115 3e-26
Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF078157-4|AAN84816.1| 365|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical pr... 29 4.5
U80028-8|AAN73866.1| 378|Caenorhabditis elegans Serpentine rece... 29 4.5
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 28 5.9
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 28 5.9
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z46935-8|CAL36511.1| 365|Caenorhabditis elegans Hypothetical
protein M106.3b protein.
Length = 365
Score = 115 bits (277), Expect = 3e-26
Identities = 73/228 (32%), Positives = 112/228 (49%), Gaps = 5/228 (2%)
Frame = -3
Query: 680 LPDFEHLPVSLGLGVCGRVGNTAYFGFSQ---ICQPKPGETXXXXXXXXXXXXXXGQIAK 510
LP + S+ L G G TA G + I + +P +T GQIA+
Sbjct: 138 LPSSRNFSPSVILSCAGLSGITALLGIRKKALIDRSRP-QTIVVSGAAGSCGSLAGQIAR 196
Query: 509 IMGCV-VIGFAGTDEKCQWLIQEAGFDHVANYKTADIPTFLKGTAPNGVDCYFDNVGGEL 333
I GC VIG G+D+KC L +E GF+ NYKT ++ L AP G+D Y+DNVGG +
Sbjct: 197 IEGCSKVIGICGSDDKCTVLKREFGFNDTINYKTENVSERLGHLAPEGIDIYWDNVGGVI 256
Query: 332 SSVVLSHMRTFGRVAVCGAISTYNETNADKLKATVVQPSIV-SKQLKVEGFQVNRFADRN 156
S V+ M GRV +CG I+ YN I+ + ++ E + V + D
Sbjct: 257 SDDVIRAMNNEGRVVLCGQIAVYNTDLPYPPPLPEHTTKIIKERNIQRERYLVLMYKDEI 316
Query: 155 MEGIQKNLAWVKSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGKSIVK 12
E + + W++ ++K KE + +G + AF+ + G NIGK +++
Sbjct: 317 DEAVAQLSEWLQQDKIKVKETIYDGLNAAPSAFVDMMNGKNIGKMLIR 364
>Z46935-7|CAL36510.1| 373|Caenorhabditis elegans Hypothetical
protein M106.3a protein.
Length = 373
Score = 115 bits (277), Expect = 3e-26
Identities = 73/228 (32%), Positives = 112/228 (49%), Gaps = 5/228 (2%)
Frame = -3
Query: 680 LPDFEHLPVSLGLGVCGRVGNTAYFGFSQ---ICQPKPGETXXXXXXXXXXXXXXGQIAK 510
LP + S+ L G G TA G + I + +P +T GQIA+
Sbjct: 146 LPSSRNFSPSVILSCAGLSGITALLGIRKKALIDRSRP-QTIVVSGAAGSCGSLAGQIAR 204
Query: 509 IMGCV-VIGFAGTDEKCQWLIQEAGFDHVANYKTADIPTFLKGTAPNGVDCYFDNVGGEL 333
I GC VIG G+D+KC L +E GF+ NYKT ++ L AP G+D Y+DNVGG +
Sbjct: 205 IEGCSKVIGICGSDDKCTVLKREFGFNDTINYKTENVSERLGHLAPEGIDIYWDNVGGVI 264
Query: 332 SSVVLSHMRTFGRVAVCGAISTYNETNADKLKATVVQPSIV-SKQLKVEGFQVNRFADRN 156
S V+ M GRV +CG I+ YN I+ + ++ E + V + D
Sbjct: 265 SDDVIRAMNNEGRVVLCGQIAVYNTDLPYPPPLPEHTTKIIKERNIQRERYLVLMYKDEI 324
Query: 155 MEGIQKNLAWVKSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGKSIVK 12
E + + W++ ++K KE + +G + AF+ + G NIGK +++
Sbjct: 325 DEAVAQLSEWLQQDKIKVKETIYDGLNAAPSAFVDMMNGKNIGKMLIR 372
>Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical
protein W09H1.5 protein.
Length = 344
Score = 33.1 bits (72), Expect = 0.21
Identities = 40/180 (22%), Positives = 70/180 (38%), Gaps = 6/180 (3%)
Frame = -3
Query: 617 TAYFGFSQICQPKPGETXXXXXXXXXXXXXXGQIAKIMGCVVIGFAGTDEKCQWLIQEAG 438
TAY K G+T QI +I+G + + + + L++E
Sbjct: 145 TAYRMLKDFIDLKKGDTVAQNGANSAVGKHVIQICRILGIKTVNVVRSRDNLEELVKELK 204
Query: 437 FDHVANYKTADIPTFLKGTAPNGVDCYFDNVGGELSSVVLSHMRTFGRVAVCGAISTYNE 258
D A+ + + GV + VGG SS+ L+ + G G + TY
Sbjct: 205 -DLGADEVITQEELYSRKKKFPGVKLALNCVGGR-SSLFLASLLDHG-----GCMVTYG- 256
Query: 257 TNADKLKATVVQPSIVSKQLKVEGFQVNRFAD------RNMEGIQKNLAWVKSGQLKYKE 96
K ++ K + + GF ++R+ D + E Q+ W+KSG++K +E
Sbjct: 257 -GMSKQPVDCPTGPLIFKDISLRGFWMSRWYDIQKSPEKRHEMYQELAGWMKSGEIKKQE 315
>AF078157-4|AAN84816.1| 365|Caenorhabditis elegans Hypothetical
protein F25E5.16 protein.
Length = 365
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 468 FICACEPYNYTTHYFR 515
F+C E YN+TTH++R
Sbjct: 38 FVCQAEKYNWTTHFYR 53
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 549 GRSCGVPCWSNCENNGLCS 493
G C +P + NC NGLC+
Sbjct: 788 GFDCSIPLFCNCSGNGLCN 806
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 278 AISTYNETNADKLKATVVQPSIVSKQL-KVEGFQVNRFADRNMEGIQKNLAWVKSGQLKY 102
++S Y N+D++ T+ + +L K +Q N F D + + + W K G+ +
Sbjct: 57 SLSAY-PPNSDEMTITIENVLVKYVELVKGSSYQFNVFGDIYLNWKDERMKWDKKGEFEN 115
Query: 101 KEHL 90
EHL
Sbjct: 116 YEHL 119
>Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical
protein D1046.4 protein.
Length = 583
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 84 FSKMFLVL*LT---AFDPSQVFLNAFHIPVGKSIHLEPFYFQLFTYN 215
++ +F L LT F S + N +++PV IH+ FYF F N
Sbjct: 400 YAAIFAFLSLTWPSVFKSSNIISNKYYLPVMVRIHVVLFYFGSFASN 446
>U80028-8|AAN73866.1| 378|Caenorhabditis elegans Serpentine
receptor, class w protein118 protein.
Length = 378
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 419 NLLRDQSQLPESTIGIFHLCLRTL*LHNPLFSQFDQHGTPQ 541
+LL+D S+ + + +F +RTL + NP+ + ++ G P+
Sbjct: 118 HLLKDYSRRCSTWLMVFIALIRTLMIRNPMSTTYESLGNPK 158
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/113 (21%), Positives = 42/113 (37%)
Frame = -3
Query: 617 TAYFGFSQICQPKPGETXXXXXXXXXXXXXXGQIAKIMGCVVIGFAGTDEKCQWLIQEAG 438
TAY + K G+ Q+A +G AG+ + ++ ++ G
Sbjct: 133 TAYRALFHLAGAKTGDVILVHGASGGVGSALMQLAAWRNIEAVGTAGSADGIRF-VKSLG 191
Query: 437 FDHVANYKTADIPTFLKGTAPNGVDCYFDNVGGELSSVVLSHMRTFGRVAVCG 279
+V N+ + +K P G + F+ + L + GRVAV G
Sbjct: 192 ARNVYNHSDKQYVSKMKNDYPGGFNHIFEMAAHTNLNTDLGLLAPRGRVAVIG 244
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +2
Query: 392 GM*VCQQFYNLLRDQSQLPESTIGIFHLCLRTL*LHNPLFSQFDQHGTPQ 541
G+ + + +++D ++ + + IF +RTL + NPL +QF+ G P+
Sbjct: 110 GLVLARTLLIVVQDYARKCSTWLIIFIAMIRTLLVRNPLSNQFESLGKPK 159
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical
protein T05G5.1 protein.
Length = 411
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = -2
Query: 570 NCSSIGCGRSCGVP---CWSNCENNGLCSYRVRR 478
N I CG+S P C CEN G+C + + R
Sbjct: 15 NVGLINCGQSLVSPQSNCKIRCENGGMCVFDLER 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,298,796
Number of Sequences: 27780
Number of extensions: 391224
Number of successful extensions: 990
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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