Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j08r
         (492 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           27   0.46 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   1.9  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   4.3  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   5.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.5  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   7.5  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   7.5  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    22   9.9  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        22   9.9  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        22   9.9  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        22   9.9  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        22   9.9  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    22   9.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   9.9  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.6 bits (56), Expect = 0.46
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 152  RQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPP 51
            R++  +R +E  +L  EA  A +  N + QP PP
Sbjct: 1101 REEDERRTEERRQLHNEANRAYRQRNRRSQPTPP 1134


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 167 KHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 24
           KH  C  +     +E +++ KEA    +T+NL +     +A  +  GT
Sbjct: 323 KHRLCELNREPTEREEQQMQKEAAVMARTMNLNQVCLCFRAYRVEPGT 370


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 313 TAPLPLMSTMSPTLYTFMYVE 375
           TA +P  S + PTL+  MY E
Sbjct: 607 TAGVPQGSVLGPTLWNLMYNE 627


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 253 VTLYTRPVFPWYTLCGIP 306
           V ++ RP  PW+++ GIP
Sbjct: 73  VGIFGRPGRPWWSVPGIP 90


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 189  DALRYNPSANTLVDNHTESMSSHVVH 266
            DA+R   + + +V NH E  S+  +H
Sbjct: 3072 DAIRIGSNESIVVPNHMERSSASSLH 3097


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 402 VPHTWNYSALHVHESVQS 349
           V +TWNY+A  V + V S
Sbjct: 282 VENTWNYTAADVADLVDS 299


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 12/52 (23%), Positives = 24/52 (46%)
 Frame = -2

Query: 266 VYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERL 111
           ++ +  H  GV+V+ + R          + EH++H   R    K  + NE++
Sbjct: 117 LFQIGQHVRGVLVSIKSRMMAYTNDAVAKFEHLRHRTMRAVKRKMDELNEQI 168


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 313 TAPLPLMSTMSPTLYTFMY 369
           TA +P  S + PTL+  MY
Sbjct: 683 TAGVPQGSILGPTLWNIMY 701


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 252 CSCSRCDCQQA 220
           C+C RC C ++
Sbjct: 42  CNCGRCSCDES 52


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 252 CSCSRCDCQQA 220
           C+C RC C ++
Sbjct: 42  CNCGRCSCDES 52


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 252 CSCSRCDCQQA 220
           C+C RC C ++
Sbjct: 42  CNCGRCSCDES 52


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 252 CSCSRCDCQQA 220
           C+C RC C ++
Sbjct: 42  CNCGRCSCDES 52


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 252 CSCSRCDCQQA 220
           C+C RC C ++
Sbjct: 618 CNCGRCSCDES 628


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 313 TAPLPLMSTMSPTLYTFMY 369
           TA +P  S + PTL+  MY
Sbjct: 629 TAGVPQGSILGPTLWNIMY 647


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,857
Number of Sequences: 2352
Number of extensions: 11276
Number of successful extensions: 66
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)