Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j06r
         (566 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   1.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.3  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   3.0  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.9  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.9  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   6.9  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   9.2  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   9.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   9.2  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 435 KGYVWYGDLCYGRSLSNSR 491
           +G  W+ D CYG   +NSR
Sbjct: 39  EGGSWHNDTCYGGGGANSR 57


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 315  VRESFVHYTVREYDMARYQSVQEG 386
            + +SF+ Y +  Y   RY +V EG
Sbjct: 1688 IGDSFLKYAITTYLYCRYDNVHEG 1711


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -1

Query: 383 FLDTLVSCHVIFPNRVMYEAFPNNNLPAGNI---FFLEAVQPFTSCAIG 246
           FL   + C +I+ + V+Y A    +  A N+   F L  V+ +  C  G
Sbjct: 267 FLGQFIQCVMIWCSLVLYVAVTGLSTKAANVGVLFILLTVETYGFCYFG 315


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 359 GTIPKCPRRTWGWTRI 406
           G IP+C R T+ W  I
Sbjct: 63  GQIPQCERLTYTWKEI 78


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 359 GTIPKCPRRTWGWTRI 406
           G IP+C R T+ W  I
Sbjct: 63  GQIPQCERLTYTWKEI 78


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 359 GTIPKCPRRTWGWTRI 406
           G IP+C R T+ W  I
Sbjct: 41  GQIPQCERLTYTWKEI 56


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 357 CHIP*PCNVRSFP*QQFA 304
           C IP  CN++ F  Q+FA
Sbjct: 413 CKIPPGCNLKIFNNQEFA 430


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 229 YL*AEPMSSGHWSHMWLIT 173
           ++ A+   +G W+ +WL+T
Sbjct: 116 FIAADNKDNGTWTQLWLVT 134


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 450  YGDLCYGRSLSNSRCKSKQIQEFGHFYR 533
            YG+ C G S  + + K  Q + + HF R
Sbjct: 1488 YGEKCQGGSHVSMKGKLIQSEPYRHFLR 1515


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,066
Number of Sequences: 2352
Number of extensions: 11740
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)