Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j05r
         (791 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g51290.1 68418.m06358 ceramide kinase-related contains weak s...    35   0.071
At5g23210.2 68418.m02715 serine carboxypeptidase S10 family prot...    28   8.2  
At5g23210.1 68418.m02714 serine carboxypeptidase S10 family prot...    28   8.2  

>At5g51290.1 68418.m06358 ceramide kinase-related contains weak
           similarity to ceramide kinases (GI:21624342) [Mus
           musculus]
          Length = 608

 Score = 34.7 bits (76), Expect = 0.071
 Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = -2

Query: 682 ITASMAIIKGNTVWKDAMKIEQVTDESETPNRPI--YAMASMEWGAFRDTLAKKDKYWFY 509
           +T+++ II G  ++ DAM++ +    S +   P   YA +   +G + D +++ +KY + 
Sbjct: 344 VTSALHIILGRKLFLDAMQVVRWKTASTSTIEPYIRYAASFAGYGFYGDVISESEKYRWM 403

Query: 508 GPLR 497
           GP R
Sbjct: 404 GPKR 407


>At5g23210.2 68418.m02715 serine carboxypeptidase S10 family protein
           similar to Serine carboxypeptidase II chains A and B
           (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
          Length = 403

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = -2

Query: 388 KRPEVKRKWFFVSSTEAAGQ-LDQTKILNPECLTSKELCFRTCDFKIKTQNVAMNHQIPA 212
           K  + K+K       +A  +  D  KIL+   L + + C  T      + +VA N  +PA
Sbjct: 171 KNCDFKQKLVTKECNDALDEYFDVYKILDMYSLYAPK-CVPTSTNSSTSHSVAGNRPLPA 229

Query: 211 LSIFLGRNSYSYTDFVSEGWRRIKTNSDP 125
               L     S+    +EGWRR+    DP
Sbjct: 230 FRSILRPRLISH----NEGWRRMAAGYDP 254


>At5g23210.1 68418.m02714 serine carboxypeptidase S10 family protein
           similar to Serine carboxypeptidase II chains A and B
           (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
          Length = 363

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = -2

Query: 388 KRPEVKRKWFFVSSTEAAGQ-LDQTKILNPECLTSKELCFRTCDFKIKTQNVAMNHQIPA 212
           K  + K+K       +A  +  D  KIL+   L + + C  T      + +VA N  +PA
Sbjct: 171 KNCDFKQKLVTKECNDALDEYFDVYKILDMYSLYAPK-CVPTSTNSSTSHSVAGNRPLPA 229

Query: 211 LSIFLGRNSYSYTDFVSEGWRRIKTNSDP 125
               L     S+    +EGWRR+    DP
Sbjct: 230 FRSILRPRLISH----NEGWRRMAAGYDP 254


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,597,067
Number of Sequences: 28952
Number of extensions: 382809
Number of successful extensions: 899
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)