Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j05f
(589 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0633 + 19446075-19446488,19446607-19446975,19447961-194480... 70 2e-12
08_01_0341 + 3011238-3011246,3011824-3012192,3012412-3012505,301... 62 2e-10
07_03_0905 + 22459687-22460071,22461766-22461888,22461986-224620... 55 4e-08
04_04_0666 + 27086568-27086975,27087073-27087477,27088542-270886... 51 8e-07
03_01_0177 + 1424773-1424850,1425307-1425391,1425498-1425577,142... 35 0.042
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 33 0.13
08_01_0927 - 9123473-9123589,9124534-9124616,9125177-9125252,912... 32 0.30
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 32 0.30
12_02_0870 - 23852923-23853228,23853416-23853728,23853813-238539... 31 0.68
08_01_0530 - 4593665-4594006,4594169-4594285,4594417-4594504,459... 31 0.90
04_04_1275 + 32321161-32321285,32321849-32322071,32322187-323223... 31 0.90
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 29 2.7
07_03_1087 - 23868787-23869325,23870052-23870181 29 2.7
04_04_0933 + 29495656-29496972,29497244-29497819,29499414-294996... 29 2.7
12_01_0470 + 3667724-3668112,3668196-3668990,3669662-3669791 29 3.6
02_03_0181 + 16100495-16101025,16101335-16101358 28 4.8
01_06_0931 - 33139383-33139580,33139748-33139870,33142520-331428... 28 4.8
08_02_0855 - 21913291-21913347,21914117-21914211,21915077-219151... 28 6.3
03_02_0511 + 9016215-9016425,9017292-9017365,9018399-9018609,901... 27 8.4
01_06_0938 - 33179237-33179362,33179485-33179668,33180114-331804... 27 8.4
>10_08_0633 +
19446075-19446488,19446607-19446975,19447961-19448054,
19448137-19448174,19448770-19448916,19449580-19449679,
19449786-19450744,19451143-19451295
Length = 757
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Frame = +2
Query: 230 RNPTVITVILNPVANKRKAKQEFEKYCEPXXXXXXXQVDVVQTASEGNAKEIVETLRGT- 406
R+P I VILNP + ++ + F EP +++VV+T G+AK +V T+ +
Sbjct: 230 RSPPKILVILNPRSGHGRSSKVFHGKVEPIFKLAGFKMEVVKTTHAGHAKSLVSTIDFST 289
Query: 407 --EAIIVAGGDGTLSETVTGLLRRNDQ--ANMFPVGVLPLGRTNSI 532
+ I+ GGDG ++E + GLL R+DQ A P+G++P G NS+
Sbjct: 290 CPDGIVCVGGDGIVNEVLNGLLCRDDQNVAVSVPIGIIPAGSDNSL 335
>08_01_0341 +
3011238-3011246,3011824-3012192,3012412-3012505,
3012594-3012631,3012862-3013008,3013912-3014011,
3014615-3015042,3015234-3015389
Length = 446
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Frame = +2
Query: 245 ITVILNPVANKRKAKQEFEKYCEPXXXXXXXQVDVVQTASEGNAKEIVETLRGT---EAI 415
+ VILNP + R +++ F + +P + VV+TA G+A + T+ + + I
Sbjct: 100 VIVILNPNSGFRSSREVFYQKVQPTLELSGFMMQVVETAYAGHAHALASTVDLSTCPDGI 159
Query: 416 IVAGGDGTLSETVTGLLRRND--QANMFPVGVLPLGRTNSI 532
I GGDG ++E + GLL R+D +A P+G++P G NS+
Sbjct: 160 ICVGGDGIVNEVLNGLLGRDDLEEAIQLPIGIIPAGSENSL 200
>07_03_0905 +
22459687-22460071,22461766-22461888,22461986-22462086,
22462229-22462301,22462771-22462848,22462995-22463065,
22463539-22463841,22464180-22464302,22464539-22464736
Length = 484
Score = 55.2 bits (127), Expect = 4e-08
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 7/129 (5%)
Frame = +2
Query: 194 AAIYGEAL---LPIERNPTVITVILNPVANKRKAKQEFEKYCEPXXXXXXXQVDVVQTAS 364
AA +G+A+ L P + +I+NP KR ++ F+ P + +T
Sbjct: 114 AAAWGDAMRDRLASLGRPKRLFIIVNPYGGKRGGRKIFQTEVLPLIEAAGILYTMQETKH 173
Query: 365 EGNAKEIVETL--RGTEAIIVAGGDGTLSETVTGLLRRND--QANMFPVGVLPLGRTNSI 532
+A+EI +L R + I+ GDG L E V GLL+R D A P+G++P G +
Sbjct: 174 RLHAQEIAHSLDLRKYDGIVCVSGDGVLVEVVNGLLQREDWNTAIKIPLGIIPAGHKRPL 233
Query: 533 GNTLFPNGK 559
T GK
Sbjct: 234 DVTSVVQGK 242
>04_04_0666 +
27086568-27086975,27087073-27087477,27088542-27088635,
27088731-27088768,27088853-27088999,27089167-27089266,
27090001-27090953,27091512-27091569,27092904-27093022
Length = 773
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +2
Query: 341 VDVVQTASEGNAKEIVETLRGT---EAIIVAGGDGTLSETVTGLLRRNDQAN--MFPVGV 505
++VV+T G+AK + T + + I+ GGDG ++E GLL R+D+A PVG+
Sbjct: 277 MEVVKTTHAGHAKSLASTFDFSAFPDGIVCVGGDGIVNEVFNGLLSRSDRAEAVSIPVGI 336
Query: 506 LPLGRTNSI 532
+P G NS+
Sbjct: 337 IPAGSDNSL 345
>03_01_0177 +
1424773-1424850,1425307-1425391,1425498-1425577,
1425771-1425898,1425962-1426049,1426187-1426277,
1426712-1426881,1427151-1427438,1427527-1427643,
1427924-1427976,1428029-1428090,1429042-1429118,
1429269-1429322,1429417-1429476,1429581-1429658,
1429805-1429851,1429933-1430051,1430280-1430364,
1430443-1430557,1430662-1430784,1430869-1430969,
1431346-1431475
Length = 742
Score = 35.1 bits (77), Expect = 0.042
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = +2
Query: 401 GTEAIIVAGGDGTLSETVTGLLRRNDQANMFPVGVLPLGRTNSIGNTLFPNGKG 562
G +A+I GGDGTL E V G + PV L G +S L P G G
Sbjct: 462 GADAVIAVGGDGTLHEVVNGFFCKGS-----PVHALDQGPDHSTALGLIPLGTG 510
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 413 IIVAGGDGTLSETVTGLLRRNDQANMFPVGVLPLGRTNSIGNTL 544
I+V GGDGT++ + + ++N ++ PV +LPLG N + +
Sbjct: 390 ILVCGGDGTVAWVLDAIEKQNYESPP-PVSILPLGTGNDLSRVM 432
>08_01_0927 -
9123473-9123589,9124534-9124616,9125177-9125252,
9125641-9125740,9125996-9126064,9126122-9126207,
9126293-9126430,9126688-9126810,9128130-9129719,
9129929-9130402
Length = 951
Score = 32.3 bits (70), Expect = 0.30
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 359 ASEGNAKEIVETLRGTEAIIVAGGDGTLSETV--TGLLRRNDQANMFPVGVLPLGRTNSI 532
A + +AK I LR ++VAGGDGT+ + G L ++ + PV V+PLG N +
Sbjct: 714 AGDHSAKSIRHNLR----VMVAGGDGTVGWVLGCLGDLYVQNREPIPPVAVIPLGTGNDL 769
Query: 533 GNT 541
+
Sbjct: 770 SRS 772
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 32.3 bits (70), Expect = 0.30
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = +2
Query: 236 PTVITVILNPVANKRKAKQEFEKYCEPXXXXXXXQVDVVQTASEGNAKEIVETL-----R 400
P + V ++P+ K + + +E P + V+ T G+A + + +L +
Sbjct: 157 PKSLMVFVHPLCGKGRGCKNWETVA-PLFERAKVKTKVIVTQRAGHAYDTLASLSDKDLK 215
Query: 401 GTEAIIVAGGDGTLSETVTGLLRRNDQANMFP 496
+ +I GGDG +E + GLL N +P
Sbjct: 216 KFDGVIAVGGDGLFNEILNGLLSTR-HTNSYP 246
>12_02_0870 -
23852923-23853228,23853416-23853728,23853813-23853938,
23854038-23854243,23854311-23854443,23854607-23854688,
23854785-23854914,23855034-23855126,23855211-23855333,
23855786-23855977,23858230-23858394,23858697-23858768,
23858826-23858945,23859873-23859949,23860032-23860398,
23860738-23861871
Length = 1212
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 413 IIVAGGDGTLSETVTGLLRRNDQANMFPVGVLPLGRTNSIGNTL-FPNGKGV 565
++V GGDGT++ + + ++ +A PV +LP G N + L + G G+
Sbjct: 403 VLVCGGDGTVAWVLDAIEKQKFEAPP-PVAILPAGTGNDLARVLSWGGGLGI 453
>08_01_0530 -
4593665-4594006,4594169-4594285,4594417-4594504,
4594929-4595006,4595914-4595927,4595993-4596075,
4596359-4596407,4596535-4596658,4596936-4597021,
4597232-4597360,4597465-4597587,4597699-4597908
Length = 480
Score = 30.7 bits (66), Expect = 0.90
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 374 AKEIVETLRGTEAIIVAGGDGTLSETVTGLLRRNDQANMFPVGVLPLGRTNSI 532
A +I TLR IIVAGGDGT S + G++ ++ P+ +PLG N++
Sbjct: 101 AVQIWRTLR----IIVAGGDGTAS-WLLGVVSDLKLSHPPPIATVPLGTGNNL 148
>04_04_1275 +
32321161-32321285,32321849-32322071,32322187-32322309,
32322391-32322519,32322939-32323024,32323233-32323356,
32323531-32323579,32323808-32323890,32323975-32324042,
32324187-32324264,32324460-32324547,32324640-32324756,
32324844-32325176
Length = 541
Score = 30.7 bits (66), Expect = 0.90
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 365 EGNAKEIVETLRGTEAIIVAGGDGTLSETVTGLLRRNDQANMFPVGVLPLGRTNSI 532
+ N I ++ +IVAGGDGT S + G++ ++ P+ +PLG N++
Sbjct: 140 KSNGDPIAFQIQSNLRLIVAGGDGTAS-WLLGVVSDLKLSHPPPIATVPLGTGNNL 194
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 501 PTGNMFA*SFRLNNPVTVSDKVPSPPATIIASVPLNVSTISFAFP 367
PTG F N+ V VS VP P+++ P+N++ S AFP
Sbjct: 189 PTGQQFQLDTGTNHAVQVSRFVP--PSSLQPPAPMNLARPSSAFP 231
>07_03_1087 - 23868787-23869325,23870052-23870181
Length = 222
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -2
Query: 459 PVTVSDKVPSPPATIIASVPLNVSTISFAFPSEAVCTTSTCKPPNNSNGS 310
P+++S +P PP +A++P NV ++ F S + +P GS
Sbjct: 4 PLSLST-LPPPPRRALANLPTNVVVVAAPFTSATATVKDSMEPGPTPGGS 52
>04_04_0933 +
29495656-29496972,29497244-29497819,29499414-29499650,
29499736-29500048,29500191-29500300
Length = 850
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 438 VPSPPATIIASVPLNVSTISFAFPSEAVCTTSTCKP 331
VP+PP+T++AS ++ S+ S+ C++ + P
Sbjct: 333 VPAPPSTVLASALRFSTSTSYDIGSDVACSSGSYSP 368
>12_01_0470 + 3667724-3668112,3668196-3668990,3669662-3669791
Length = 437
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 546 NKVLPIEFVRPSGNTPTGNMFA*SFRLNNPVTVS 445
+K P + +R SG T N F +FRL+NP +S
Sbjct: 23 DKEFPDDVIRASGLTSQENPFHVAFRLSNPPGIS 56
>02_03_0181 + 16100495-16101025,16101335-16101358
Length = 184
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 372 FPSEAVCTTSTCKPPNNSNGSQYFSNSCFAFLLLAT-GLRITVMTVGFLSMGRRASP 205
FPS +V +TSTC P + G+ + LA G + V+ G RA P
Sbjct: 69 FPSASVTSTSTCNPTDGWRGAPQSGDRGVGRRELAVMGTEVAVVDTRSEGRGSRAPP 125
>01_06_0931 -
33139383-33139580,33139748-33139870,33142520-33142891,
33143380-33143450,33143769-33143810,33143895-33143967,
33144518-33144679,33144778-33144878,33144992-33145114,
33145296-33145689
Length = 552
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 446 ETVTGLLRRND--QANMFPVGVLPLGRTNSIGNTL 544
+ V G+L+R D +A P+GV+P G N + +L
Sbjct: 260 QVVNGILQRMDWEEAMKIPIGVVPAGTGNGMAKSL 294
>08_02_0855 -
21913291-21913347,21914117-21914211,21915077-21915165,
21915449-21915507,21917872-21918160,21918307-21918398,
21918495-21918621,21918730-21918811,21919265-21919541,
21919647-21919812,21920519-21920847
Length = 553
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = -2
Query: 507 NTPTGNMFA*SFRLNNPVTVSDKVPSPPATIIASVPLNV----STISFAFPSEAVCTTST 340
NT + + F S+ L ++ D +P+P T +P+ + + S+ + +
Sbjct: 422 NTDSSSKFPISYVLKRSFSIDDTMPNPLLTSEKFIPIPIVYYHCSSSYGLSLRLLAQVNL 481
Query: 339 CKPPNNS 319
C PP+ S
Sbjct: 482 CSPPSPS 488
>03_02_0511 +
9016215-9016425,9017292-9017365,9018399-9018609,
9019235-9019263,9019646-9020798,9021022-9021251
Length = 635
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = -2
Query: 546 NKVLPIEFVRPSGNTPTGNMFA*SFRLNNPVTVSDKVPSPPATIIASVPL 397
N+ L I P G PT NMFA N P VS V S T ++ PL
Sbjct: 239 NRFLSISANSPGG--PTSNMFAVGPYANEPQLVSPPVFSTYTTEPSTAPL 286
>01_06_0938 -
33179237-33179362,33179485-33179668,33180114-33180409,
33180702-33180821,33180931-33181018,33181352-33181426,
33181565-33181632,33181770-33181852,33182010-33182058,
33183006-33183126,33183225-33183310,33183782-33183910,
33184033-33184155,33184277-33184486,33185217-33185240
Length = 593
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 413 IIVAGGDGTLSETVTGLLRRNDQANMFPVGVLPLGRTNSI 532
+IVAGGDGT + + G++ + PV +PLG N++
Sbjct: 118 LIVAGGDGT-AGWLLGVVSDLKLVHPPPVATVPLGTGNNL 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,033,594
Number of Sequences: 37544
Number of extensions: 270968
Number of successful extensions: 856
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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