Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10j03r
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 59 4e-09
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 54 9e-08
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 48 1e-05
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 45 5e-05
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 41 0.001
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.025
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.057
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 35 0.075
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.075
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 34 0.13
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 33 0.23
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.30
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 31 0.70
SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032) 30 1.6
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 30 2.1
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.8
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 29 2.8
SB_56964| Best HMM Match : Zona_pellucida (HMM E-Value=0) 29 4.9
SB_52967| Best HMM Match : zf-CCCH (HMM E-Value=4.7) 29 4.9
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_28576| Best HMM Match : Equine_IAV_S2 (HMM E-Value=2.8) 28 6.5
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.5
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 28 8.6
SB_32032| Best HMM Match : PAN (HMM E-Value=0.029) 28 8.6
SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 28 8.6
SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31) 28 8.6
SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 58.8 bits (136), Expect = 4e-09
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 14/220 (6%)
Frame = -3
Query: 639 ICGASLLTNTRSVTAAHCWRTRNAQARQFTL-AFGTANIFSG--------GT--RVTTSS 493
ICG S++ + VTAAHC T+ A ++T+ AF N+ G G+ +
Sbjct: 1808 ICGGSIVNSQWIVTAAHCVTTKPPGASRYTMYAFSDLNVTLGEHQLYQLDGSEQNIPIEG 1867
Query: 492 VHLHGSYNMNNLNNDVAIIN-HNHVGFNNNIQRINLASXXXXXXXXXXXXXXXGRTSDAA 316
+ +H SY N+L+ D+A++ + FN + ++ L GR +++
Sbjct: 1868 IVVHPSY--NDLDYDIALLKLRQPITFNAYVSQVCLPQ-AALLAGTPCYVSGWGRIGESS 1924
Query: 315 SGANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVSGANG--RSTCXXXXXXXXXXXX 142
G+N Q + S+ ++ C Y N I + + +G G + TC
Sbjct: 1925 PGSNVLQ--EASIPLVDQRACEEQYRNLKPITARMRCAGIYGTPKGTCKGDSGGPLVCES 1982
Query: 141 XXGRQLIGITSFGSDRGCQRGYPAGFARVTSFNSWIRARI 22
L+G+TS+ + GY +A V F WIR +
Sbjct: 1983 KGRWVLMGVTSWSYNGCADSGYAGVYADVVYFKDWIRQTV 2022
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 54.4 bits (125), Expect = 9e-08
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 9/215 (4%)
Frame = -3
Query: 651 GRTSICGASLLTNTRSVTAAHCWR-TRNAQARQFTLAFGTAN---IFSGGTRVTTSSVHL 484
G CG +L+ VTA+HC R + ++ G N I S R+ + ++L
Sbjct: 235 GYKQFCGGALVHEDWVVTASHCINDIRPEDYKTHIISLGGHNKTGIMSVEQRIGIAKIYL 294
Query: 483 HGSYNM--NNLNNDVAIINHNHVGFNNN-IQRINLASXXXXXXXXXXXXXXXGRTSDAAS 313
H YN+ + NNDVA+I +Q + LA +
Sbjct: 295 HADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVCLADGTVSFPPGTECWITGWGRLH-SG 353
Query: 312 GANNQQKRQVSLQVITNAVCARTYG-NSVIIGSTLCVSGANGRSTCXXXXXXXXXXXXXX 136
GA+ + +Q ++++ A C + + + ST+ + G TC
Sbjct: 354 GASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVPGIDTCQGDSGGPLVCENNN 413
Query: 135 GRQLIGITSFGSDRGCQR-GYPAGFARVTSFNSWI 34
L+G+TS+G GC YP +A++T W+
Sbjct: 414 KWTLVGVTSWG--YGCAHPDYPGIYAKLTELKDWV 446
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 54.0 bits (124), Expect = 1e-07
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Frame = -3
Query: 654 NGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVTTS----SVH 487
NGR ICG SL+ VTAAHC RN +T+ G A+ +G T V + +
Sbjct: 52 NGR-HICGGSLIAKDWVVTAAHC-VDRNPTPSGYTVVVG-AHHRTGNTPVQNTFRLKQLF 108
Query: 486 LHGSYNMNNLNNDVAIIN-HNHVGFNNNIQRINL-ASXXXXXXXXXXXXXXXGRTSDAAS 313
H ++M +L ND+A++ H V ++ + + L +S GRT S
Sbjct: 109 KHEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGS 168
Query: 312 GANNQQKRQVSLQVITNAVCARTYGNSVIIGS-TLCVSGANGRSTC 178
A Q Q L V ++ C RT G V + S ++ +G G+ C
Sbjct: 169 AAGILQ--QAMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGC 212
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 50.4 bits (115), Expect = 1e-06
Identities = 47/205 (22%), Positives = 76/205 (37%), Gaps = 3/205 (1%)
Frame = -3
Query: 639 ICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVTTSSVHLHGSY-NMN 463
ICG SLL++T +TAAHC R+ +T+ G GT S+ + H Y
Sbjct: 339 ICGGSLLSSTWVLTAAHC-VIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYKHEKYVGGK 397
Query: 462 NLNNDVAIIN-HNHVGFNNNIQRINLASXXXXXXXXXX-XXXXXGRTSDAASGANNQQKR 289
+ +D+A+I F+ + + L GR S + + +
Sbjct: 398 DKKHDLALIRLAKPAAFSAKVSPVCLPKQGDLLGNEKNCYTTGWGRVSGSMMFFMATKLQ 457
Query: 288 QVSLQVITNAVCARTYGNSVIIGSTLCVSGANGRSTCXXXXXXXXXXXXXXGRQLIGITS 109
Q V+ + CA +T+ +G +G S C L G S
Sbjct: 458 QARTPVVDHETCAIKLDKFAADKTTMICAGGSGSSACSGDSGGPLVCHEGGTWVLRGAVS 517
Query: 108 FGSDRGCQRGYPAGFARVTSFNSWI 34
+G+ C +AR++S WI
Sbjct: 518 WGTSHSCPGRMFVAYARISSHIDWI 542
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -3
Query: 639 ICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVTTSSVHLHGSYNMNN 460
ICGASLLT ++TAAHC T + A +TL G + G S + H ++M +
Sbjct: 265 ICGASLLTPGWALTAAHC-LTLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSMVH 323
Query: 459 LNNDVAIIN-HNHVGFNNNIQRINLAS 382
+ NDVA++ +V ++ + I L S
Sbjct: 324 VRNDVALLKLSTYVQLSDKVGTICLPS 350
Score = 36.7 bits (81), Expect = 0.019
Identities = 27/101 (26%), Positives = 45/101 (44%)
Frame = -3
Query: 330 TSDAASGANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVSGANGRSTCXXXXXXXXX 151
+SD + A+ Q+ +V L + C T G +V S +C GA G S C
Sbjct: 422 SSDQHTLADKLQQSKVPL--VNYTTCRSTNGATVDENSMICAGGA-GSSACNGDSGGPLQ 478
Query: 150 XXXXXGRQLIGITSFGSDRGCQRGYPAGFARVTSFNSWIRA 28
L G+ S+ + C + +ARV+S+++WI +
Sbjct: 479 CLENERWVLRGVASWVTAETCPGNTFSVYARVSSYSNWIES 519
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 45.2 bits (102), Expect = 5e-05
Identities = 50/219 (22%), Positives = 85/219 (38%), Gaps = 7/219 (3%)
Frame = -3
Query: 657 RNGRTSI--CGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFS---GGTRVTTSS 493
R GR++ CGA+L+ ++TAAHC + ++T+ G+ + + +
Sbjct: 344 RKGRSNYHTCGATLIRPGWAITAAHC----VMRPDKYTVIVGSHSRDASEPSAQNIKVRR 399
Query: 492 VHLHGSYNMNNLNNDVAIINHNHVGFNNNIQRINLASXXXXXXXXXXXXXXXGRTSDAAS 313
V+ H ++M N +D+A++ N+ GR
Sbjct: 400 VYRHRGFSMANYVDDIALLELERSAVINDKVSTACLPSGEPKVGAICYIAGWGRLQSLGD 459
Query: 312 GANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCV--SGANGRSTCXXXXXXXXXXXXX 139
A Q Q + +++ C R YG + S +CV + N S+C
Sbjct: 460 VALTLQ--QAKVPIVSKEDCKRAYGAIIRPYSHICVGFNTENAASSCQGDSGGPLVCEEE 517
Query: 138 XGRQLIGITSFGSDRGCQRGYPAGFARVTSFNSWIRARI 22
L G TSFG + C + + + RV S+ WI RI
Sbjct: 518 GRWVLHGATSFG--KSCSPKHYSVYTRVNSYMKWIFDRI 554
Score = 27.9 bits (59), Expect = 8.6
Identities = 33/161 (20%), Positives = 56/161 (34%), Gaps = 2/161 (1%)
Frame = -3
Query: 507 VTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQRINLASXXXXXXXXXXXXXXXGRT 328
+ S V H Y+ + ND+A++ + + ++ A G
Sbjct: 152 IPVSHVIEHPEYDDRKIKNDIALLELSRPVKFDREGKVGTACLTNQQPTPGKRCYITGWG 211
Query: 327 SDAASGANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVSGANGRST--CXXXXXXXX 154
S +G + + +Q L + ++ C Y V + LC A ++ C
Sbjct: 212 STIGTGNSPRILQQAMLPIASHNDCKNKY-YGVSSTAHLCAGEARSGASGGCNGDSGGPL 270
Query: 153 XXXXXXGRQLIGITSFGSDRGCQRGYPAGFARVTSFNSWIR 31
L G S+G C Y FARV S+ WI+
Sbjct: 271 VCEDNGRWYLHGAVSYGKLH-CPTTYYTVFARVASYTDWIK 310
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 43.6 bits (98), Expect = 2e-04
Identities = 49/213 (23%), Positives = 77/213 (36%), Gaps = 6/213 (2%)
Frame = -3
Query: 654 NGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAF--GTANIFSGGTRVTTSSVHLH 481
N CG +L+T +TAAHC +N + Q L T+ S R++ S+H H
Sbjct: 651 NSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQVRLGAQDRTSPDPSVEMRISIRSIHNH 710
Query: 480 GSY-NMNNLNNDVAIINHNHVGFNNNIQRINLASXXXXXXXXXXXXXXXGRTSDAASGAN 304
Y + +ND+A++ + + RINLA S
Sbjct: 711 PDYGSPKRSSNDIALLRLSRPTILTH--RINLACMPNDTVHFPNGTMCYITGWGTLSSGG 768
Query: 303 NQQK--RQVSLQVITNAVCARTYGNSVIIGSTLCVSGANGRSTCXXXXXXXXXXXXXXGR 130
+Q + Q + + T + C R+Y + + G TC
Sbjct: 769 SQPEALNQAVVPLRTRSECERSYPGKISADMICAGNPEGGVDTCQGDSGGPLVCQHGNQW 828
Query: 129 QLIGITSFGSDRGCQ-RGYPAGFARVTSFNSWI 34
L G+TS+G GC G +A V W+
Sbjct: 829 FLTGVTSWG--HGCAFAGKYGVYAGVQQLKQWV 859
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 41.9 bits (94), Expect = 5e-04
Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 10/224 (4%)
Frame = -3
Query: 663 HSRNGRTS-ICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFG--TANIFSG-GTRVTTS 496
H++ +T ICG S++ VTAAHC+ + A+ +T+A G N G R
Sbjct: 125 HNKVTKTPHICGGSVVAPEWIVTAAHCF-AYSKDAKDYTIAVGEHDLNATDGYEQRPDVE 183
Query: 495 SVHLHGSY-NMNNLNNDVAIIN-HNHVGFNNNIQRINLASXXXXXXXXXXXXXXXGRTSD 322
+ LH Y NN + DVA+I + + +N+ ++ + L S
Sbjct: 184 RIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRPVCLPSLKEDLEENTQCYISGWGHLQ 243
Query: 321 AASGANNQQKRQVSLQVITNAVCARTYGN-SVIIGSTL-CVS-GANGRSTCXXXXXXXXX 151
A G Q ++ +++ C + Y + + S + C GA G C
Sbjct: 244 EA-GHGPWVLHQAAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDACQGDSGGPLV 302
Query: 150 XXXXXGRQLIGITSFGSDRGCQRGYPAG-FARVTSFNSWIRARI 22
L+G S+G GC RG G +A + W+++ I
Sbjct: 303 CKEGDVWYLMGAISWGV--GCARGGRYGVYADMMDLKYWVQSTI 344
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = -3
Query: 639 ICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVTTSSVH---LHGSYN 469
ICG SL+++T VTAAHC R++ Q+ + G N T +V H YN
Sbjct: 501 ICGGSLVSSTWVVTAAHC-VARSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYN 559
Query: 468 MNNLNNDVAII 436
L+ND+A+I
Sbjct: 560 NPRLSNDIALI 570
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = -3
Query: 636 CGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGT-ANIFSGGTRV-TTSSVHLHGSYNMN 463
CGASLL+ ++TAAHC + R++ +TLA G + +V S V H ++M
Sbjct: 111 CGASLLSPGWALTAAHCVQ-RSSNPADYTLAAGAHRRVNDAHAQVLRVSQVISHKEFSMG 169
Query: 462 NLNNDVAII 436
+L NDV ++
Sbjct: 170 HLRNDVTLL 178
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 40.3 bits (90), Expect = 0.002
Identities = 53/211 (25%), Positives = 81/211 (38%), Gaps = 4/211 (1%)
Frame = -3
Query: 654 NGRTSICGASLLTNTRSVTAAHCWRT-RNAQARQFTLAFGTANIFSGGTRVTTSSVHLHG 478
NGR ICG SL+T +TAAHC + A + F R+T + H
Sbjct: 101 NGR-HICGGSLITPEWVLTAAHCVEDFPHPSAHRIKERSAIQQEF----RLT--KLFKHK 153
Query: 477 SYNMNNLNNDVAIIN-HNHVGFNNNIQRINLASXXXXXXXXXXXXXXXGRTSDAASGANN 301
++M++L NDVA++ N + ++ + + L G +
Sbjct: 154 DFSMSHLKNDVALLKLDNPIQPSDKVNTVCLPERNSRAQVGAQCFITGWGRL-VGGGQPS 212
Query: 300 QQKRQVSLQVITNAVCAR--TYGNSVIIGSTLCVSGANGRSTCXXXXXXXXXXXXXXGRQ 127
+ +Q L V +++ C R +Y V S +C G G C
Sbjct: 213 EILQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGM-GMGGCQGDSGGPFVCNEGGRWV 271
Query: 126 LIGITSFGSDRGCQRGYPAGFARVTSFNSWI 34
L G S+G C + FARV+SF WI
Sbjct: 272 LRGAVSWGQPM-CGTDHYTVFARVSSFIDWI 301
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 39.5 bits (88), Expect = 0.003
Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 7/212 (3%)
Frame = -3
Query: 639 ICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFS-GGTR--VTTSSVHLHGSYN 469
ICG ++++ +TAAHC ++ +A L G +F+ GT + + H +Y+
Sbjct: 573 ICGGNVISPWWVLTAAHCV--QDERASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYS 630
Query: 468 MNNLNNDVAIINHNH-VGFNNNIQRINLASXXXXXXXXXXXXXXXGRTSDAASGANNQQK 292
N ++ D A++ + F +Q + L + N Q
Sbjct: 631 YNTVDYDYALLKLTRPLNFTQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRGSPSPNYLQ- 689
Query: 291 RQVSLQVITNAVCARTY-GNSVIIGSTLCVSGANG--RSTCXXXXXXXXXXXXXXGRQLI 121
+V L ++ ++ C TY S I + +G G ++ C L+
Sbjct: 690 -EVGLPLVNHSQCHATYLTASRKITPRMRCAGTEGVAKAVCSGDSGGPLVCERGGRWFLM 748
Query: 120 GITSFGSDRGCQRGYPAGFARVTSFNSWIRAR 25
G++S+G C + P F+ V + WIR +
Sbjct: 749 GLSSWG--WVCPQARPKVFSDVLAAMDWIREK 778
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 37.9 bits (84), Expect = 0.008
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 16/226 (7%)
Frame = -3
Query: 660 SRNGRTSI--CGASLLTNTRSVTAAH-CWRTRNAQARQ----FTLAFGTANIFSGGTRVT 502
S GR+ CG SL+++ VTAA R +N RQ +T+ G A+ G T V
Sbjct: 445 SLRGRSGFHTCGGSLISDRWVVTAAQGIHRNKNPGGRQNPGGYTVVVG-AHKKRGSTSVQ 503
Query: 501 TS----SVHLHGSYNMNNLNNDVAIIN-HNHVGFNN--NIQRINLASXXXXXXXXXXXXX 343
S + H YN + ND+A++ V F++ + + L
Sbjct: 504 QSLRLSQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITG 563
Query: 342 XXGRTSDAASGANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVSGANGRST--CXXX 169
D + Q Q L + ++ C R YG+ V + LC A + C
Sbjct: 564 WGAINGDTQQSPDILQ--QAMLPIASHENCRRKYGD-VSSTAHLCAGEARSDAAGGCNGD 620
Query: 168 XXXXXXXXXXXGRQLIGITSFGSDRGCQRGYPAGFARVTSFNSWIR 31
L G S+G R C + FARV S+ WI+
Sbjct: 621 SGGPLVCEDNGSWFLHGAVSYGL-RNCPTTHYTVFARVASYTDWIK 665
Score = 37.1 bits (82), Expect = 0.014
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = -3
Query: 660 SRNGRTSI--CGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRV----TT 499
S GR+ CG SL+++ VTAAHC RN +T+ G A+ G T V
Sbjct: 122 SLRGRSGFHTCGGSLISDRWVVTAAHCIH-RNKNPGGYTVVVG-AHKKRGSTSVQQSLRL 179
Query: 498 SSVHLHGSYNMNNLNNDVAII 436
S + H YN + ND+A++
Sbjct: 180 SQIIEHPKYNDRRIVNDIALL 200
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 36.3 bits (80), Expect = 0.025
Identities = 46/221 (20%), Positives = 77/221 (34%), Gaps = 17/221 (7%)
Frame = -3
Query: 645 TSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVTT---SSVH---- 487
T +CG SL+ VTAAHC N + + G + VT + +H
Sbjct: 457 TIVCGGSLINREWVVTAAHCIDRNNPSRTGCVVPDPPIRVILGESDVTKHEGNEIHRDVA 516
Query: 486 ---LHGSYNMNNLNNDVAIINHNH--VGFNNNIQRINLASXXXXXXXXXXXXXXXGRTSD 322
+H Y+ L ND+A+I F +++ + L + G
Sbjct: 517 QICIHPDYHEIKLTNDLALIRLRTPITTFTKHVRPVCLPTSATPDLAVGTNCTVTGYGRV 576
Query: 321 AASGANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVSGANGR-STCXXXXXXXXXXX 145
+ + Q R ++ V++ + C Y I +C G+ +C
Sbjct: 577 GENEDLSTQLRHATIPVLSVSECRANYSGHTINDKVICAGYEGGKIDSCKGDSGGPFVCK 636
Query: 144 XXXGRQ---LIGITSFGSDRGCQR-GYPAGFARVTSFNSWI 34
L G S+G GC R G P + + + +WI
Sbjct: 637 DPRVTSRFILHGAVSWGV--GCARKGQPGIYTDIKKYLNWI 675
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 35.1 bits (77), Expect = 0.057
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -3
Query: 639 ICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVT--TSSVHLHGSYNM 466
ICG SL++ T VTAAHC + + GT T + H +YN
Sbjct: 92 ICGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYNS 151
Query: 465 NNLNNDVAII 436
L+ND+A+I
Sbjct: 152 PQLSNDIALI 161
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 34.7 bits (76), Expect = 0.075
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Frame = -3
Query: 636 CGASLLTNTRSVTAAHCWR-TRNAQARQFTLAFGTANIFSGGT----RVTTSSVHLHGSY 472
CG SL+ + +TAAHC RN R++++ G A+ G T +++ S ++ H Y
Sbjct: 68 CGGSLIDSEWVLTAAHCVAGIRN--PRRYSVYVG-AHELDGTTQVEEKISISKIYSHEKY 124
Query: 471 NMNNLNNDVAII 436
+ + L +DVA+I
Sbjct: 125 SSSLLTSDVALI 136
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 34.7 bits (76), Expect = 0.075
Identities = 20/85 (23%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = -3
Query: 636 CGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANI---FSGGTRVTTSSVHLHGSYNM 466
CG +L+ +TAAHC+ R + ++T+ G +++ G ++ ++ +H YN
Sbjct: 1266 CGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKAIFVHPQYNS 1324
Query: 465 NNLNNDVAIIN-HNHVGFNNNIQRI 394
++ +D+A++ FN+ + I
Sbjct: 1325 SSHEHDLAVLQLQQPAEFNSRVSPI 1349
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 639 ICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVTTSSVHLHGSY-NMN 463
ICG SLL+ +TAAHC R+ + +T+ G GT S+ + H Y
Sbjct: 55 ICGGSLLSPLWLLTAAHC-VIRSNNSADYTVIVGAHKRVLDGTEHKLSTFYKHEKYVGGK 113
Query: 462 NLNNDVAII 436
+ +D+A+I
Sbjct: 114 DKKHDLALI 122
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -3
Query: 636 CGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGT--ANIFSGGTRVTTSSVHLHGSYNMN 463
CG SL+ + +TAAHC ++ L + ++ + + S++ H +YN
Sbjct: 417 CGGSLIHSNWVLTAAHCISSKRPAEVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSR 476
Query: 462 NLNNDVAII 436
+ ND+A++
Sbjct: 477 TMYNDIALL 485
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 32.7 bits (71), Expect = 0.30
Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 11/164 (6%)
Frame = -3
Query: 636 CGASLLTNTRSVTAAHC---WRTRNAQARQFTLAFGTANIFSGGTR-VTTSSVHLHGSYN 469
CG S++ VTA HC W R R A ++ G + +HLH +
Sbjct: 10 CGGSIIDPHWVVTAGHCVVPWSPRAIGTRVLRFAEHDSSRMEGYEQYAIPDRIHLHPGFV 69
Query: 468 MNNLNN----DVAIIN-HNHVGFNNNIQRINLASXXXXXXXXXXXXXXXGRTSDAASGAN 304
+ +++ D+A+++ + F++ IQ I L + SG
Sbjct: 70 IGGVSHPGYYDIALLHLAKPIQFSDRIQPICLPQDDTEFPAGKMCYLTGWGETVLDSGVF 129
Query: 303 NQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVSGAN--GRSTC 178
+ +Q+ + ++ +VC S II +G N G+ C
Sbjct: 130 SPTLKQLKVPLVNKSVCNSNNSYSGIIHEQFMCAGYNQGGQDGC 173
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 654 NGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANI 526
N T CG SL+ +T++HC+ T N + QF + G ++
Sbjct: 269 NLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDV 311
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 31.9 bits (69), Expect = 0.53
Identities = 42/173 (24%), Positives = 63/173 (36%), Gaps = 8/173 (4%)
Frame = -3
Query: 504 TTSSVHLHGSYNMNNLNNDVAIINHNHVG-FNNNIQRINLASXXXXXXXXXXXXXXX-GR 331
T V +H +Y ++DVA++ +H N + I L GR
Sbjct: 1404 TVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVGKNCYITGWGR 1463
Query: 330 TSDAASGANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVSGANGRST---CXXXXXX 160
T GA+ Q + + +++ CA ++ S + G ST C
Sbjct: 1464 TGYNRPGASVLQ--EAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
Query: 159 XXXXXXXXGRQLI-GITSFGSDRGCQRGYP--AGFARVTSFNSWIRARI*MTT 10
R I G+ S+G+ R C G +ARV F WIR I TT
Sbjct: 1522 PFVCQGSNKRWNIQGVVSWGT-RTCSSGQNEYTVYARVAQFVPWIRKYIGSTT 1573
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.53
Identities = 46/214 (21%), Positives = 74/214 (34%), Gaps = 5/214 (2%)
Frame = -3
Query: 660 SRNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVTTSSVHLH 481
S NG CG SL+ +TAAHC + + + + + + H
Sbjct: 50 SPNG-DQFCGGSLIDPGWVLTAAHCLVGEQPDSALLGAHYRSNKTVGTEKDIKVAQIIPH 108
Query: 480 GSYNMN-NLNNDVAIIN-HNHVGFNNNIQRINLASXXXXXXXXXXXXXXXGRTSDAAS-G 310
+Y+ + ND+A++ N N + + LA+ +S G
Sbjct: 109 KNYHSPIEMANDIALLKLENPANLVNGVGTVCLANNNTHLPVDEFGKCYITGWGSLSSGG 168
Query: 309 ANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVS-GANGRSTCXXXXXXXXXXXXXXG 133
A + Q S+ +++ + C I S LC G +C G
Sbjct: 169 AAPDRLMQASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGDSGGPLVCEDTNG 228
Query: 132 R-QLIGITSFGSDRGCQRGYPAGFARVTSFNSWI 34
R L G+TS+G R Y +A V WI
Sbjct: 229 RWHLEGVTSWGYGCAAPRMYGV-YASVRYLRDWI 261
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 31.5 bits (68), Expect = 0.70
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = -3
Query: 291 RQVSLQVITNAVCARTYGNSVIIGSTLCVSGA--NGRSTCXXXXXXXXXXXXXXGRQLIG 118
+Q + + ++ C R YG+ + + LC A N C L G
Sbjct: 88 QQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGACQGDSGGPLVCERNGQWTLYG 147
Query: 117 ITSFGSDRGCQRGYPAGFARVTSFNSWIRAR 25
+ SFG+ C+ + +V+++ WI R
Sbjct: 148 VVSFGAG-NCEVTSYTVYTKVSNYLDWITKR 177
>SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032)
Length = 807
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 325 RCCFGSQQPTKTPSEPPGHHQRRLRPHVRKLCDHWLH 215
+ C S P T PP H LRP R D LH
Sbjct: 708 QACASSSIPFSTTKHPPVHRYHSLRPSTRLFIDTILH 744
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -3
Query: 510 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQR-INLASXXXXXXXXXXXXXXXG 334
R +S++ + N N++NN+ + IN+N+ NNN IN S
Sbjct: 1759 RNNNNSINNRNNTNNNSINNNNSSINNNNSSINNNNSSIINNNSSINNNNSSINNNNSSI 1818
Query: 333 RTSDAASGANNQQKRQVSLQVITN 262
+++++ NN + +I N
Sbjct: 1819 INNNSSNNNNNSSINNNNSSIINN 1842
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 465 NNLNNDVAIINHNHVG-FNNNIQRINL 388
NN+NN+ IIN+N++ NNNI IN+
Sbjct: 409 NNINNNNIIINNNNIIIINNNIININI 435
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 459 LNNDVAIINHNHVGFNNNIQRINL 388
+NN+ IIN+N++ NNNI N+
Sbjct: 393 INNNNIIINNNNIIINNNINNNNI 416
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = -3
Query: 636 CGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFS--GGTRVTTSSVHLHGSYNMN 463
CG +L+ VTAAHC +N + + + G + S G + +++H+H + +
Sbjct: 314 CGGTLIDTEWVVTAAHC-VFQNIEPSNYKIKLGAHDRESSEGALTIPVTAIHMHTRFMTD 372
Query: 462 -NLNNDVAII 436
+ D+AI+
Sbjct: 373 GSYGYDIAIM 382
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 489 HLHGSYNMNNLNNDVAIINHNHVGFNNNIQRIN 391
+++ + N NN NN++ IN+N+ NNNI N
Sbjct: 92 NINNNNNNNNNNNNINNINNNNNNNNNNINNNN 124
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 654 NGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFG 538
N T CG SL+ +T++HC+ T N + QF + G
Sbjct: 9 NLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 47
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -3
Query: 639 ICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIF 523
+CG +LLT+ +TAA C+R N +A ++ + G + +
Sbjct: 283 VCGGTLLTSEWVLTAARCFRD-NKRAGEWKVILGETDFY 320
>SB_56964| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 908
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = -2
Query: 319 CFGSQQPTKTPSEPP--GHHQRRLRPHVRK-LCDHWLHPLC 206
C SQ P S+ P H Q L H + LCDH +PLC
Sbjct: 779 CDHSQDPLYDHSQNPLCDHSQNPLYDHSQNPLCDHSQNPLC 819
>SB_52967| Best HMM Match : zf-CCCH (HMM E-Value=4.7)
Length = 226
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = -2
Query: 319 CFGSQQPTKTPSEPP--GHHQRRLRPHVRK-LCDHWLHPLC 206
C SQ P S+ P H Q L H + LCDH +PLC
Sbjct: 97 CDHSQDPLYDHSQNPLCDHSQNPLYDHSQNPLCDHSQNPLC 137
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 126 LIGITSFGSDRGCQRGYPAGFARVTSFNSWIRARI 22
L G S+G+ R C Y F RV+S+ +WI +I
Sbjct: 692 LHGAVSYGA-RWCPTDYYTVFTRVSSYVAWINGKI 725
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Frame = -3
Query: 309 ANNQQKRQVSLQVITNAVCARTYGNSVIIGSTLCVSGANGRST--CXXXXXXXXXXXXXX 136
A ++ +Q L + ++ C R YG+ V + LC A + C
Sbjct: 903 AISRHPQQAMLPIASHENCRRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNG 961
Query: 135 GRQLIGITSFGSDRGCQRGYPAGFARVTSFNSWIR 31
L G S+G + C + FARV S+ WI+
Sbjct: 962 SWFLHGAVSYGM-KYCPTTHYTVFARVASYTDWIK 995
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 657 RNGRTSICGASLLTNTRSVTAAHCWRTRN 571
R G CG SL++ +TAAHC RN
Sbjct: 126 RKGGHVACGGSLISEKWVLTAAHCVTHRN 154
>SB_28576| Best HMM Match : Equine_IAV_S2 (HMM E-Value=2.8)
Length = 213
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 477 SYNMNNLNNDVAIINHNHVGFNNN 406
S N NN+NN++ I N+N+ NNN
Sbjct: 126 SDNNNNINNNIIINNNNNNDENNN 149
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = -3
Query: 636 CGASLLTNTRSVTAAHC-WRTRNAQARQFTLAFG--TANIFSGGTR-VTTSSVHLHGSYN 469
CG +L+ VTAAHC + + G + G + V S++ LH N
Sbjct: 749 CGGALIARDWVVTAAHCFYYDGKIVPSDILVRLGEHDRTLEEGSEQNVRASNLVLHPLAN 808
Query: 468 MNNLNNDVAII 436
N L+ DVA+I
Sbjct: 809 KNGLDFDVALI 819
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 663 HSRNGRTSICGASLLTNTRSVTAAHCWRTRN 571
HS N + ICG +L+ +TAAHC+ N
Sbjct: 149 HSGN-QMQICGGALINREWVLTAAHCFYKTN 178
>SB_32032| Best HMM Match : PAN (HMM E-Value=0.029)
Length = 610
Score = 27.9 bits (59), Expect = 8.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 421 WLQQQHPAHQPSQWKQQLCWYLGLGCRLR 335
W+ + HP H+ ++LC+ +G C R
Sbjct: 457 WMNESHPRHEDGIVSRRLCYRVGGDCCAR 485
>SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 534 ANIFSGGTRVTTSSVHLHGSYNMN-NLNNDVAIINHNHVGFNNNIQRINL 388
A I++GGT + + H N N N NN+ N N+ NN I ++
Sbjct: 978 AYIYAGGTATPDTGISEHNDNNNNTNTNNNSDNNNTNNNSDNNTINNYSV 1027
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = -3
Query: 636 CGASLLTNTRSVTAAHC----WRTRNAQARQFTLAFGTANIFSG-GTRVTTSSVHLHGSY 472
CG +L++ VTAAHC +N TL + G R + + + +H Y
Sbjct: 377 CGGTLVSPQWVVTAAHCVDHVKDPKNYNELAITLGEHKRSASEGTEQRFSVARIIVHPQY 436
Query: 471 -NMNNLNNDVAIINHN 427
+NND+A+I N
Sbjct: 437 FEPTAINNDIALIKLN 452
>SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31)
Length = 273
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 471 NMNNLNNDVAIINHNHVGFNNN 406
N NN+NN+ I N+N++ NNN
Sbjct: 238 NNNNINNNNNINNNNNINNNNN 259
>SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 489 HLHGSYNMNNLNNDVAIINHNHVGFNNNIQR 397
H +G NN NN+ IIN+N+ NNI++
Sbjct: 24 HNNGHNITNNNNNNNIIINNNNDNSKNNIKK 54
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = -3
Query: 291 RQVSLQVITNAVCARTYGNSVIIGSTL-CVSGANGRSTCXXXXXXXXXXXXXXGRQLIGI 115
RQ + ++ + C R + T+ CV GA G S C L G+
Sbjct: 83 RQSLVPLVDHVTCKRGLKEFYLDEETMMCVGGA-GSSACNGDSGGPLVCEEGGKWVLRGV 141
Query: 114 TSFGSDRGCQRGYPAGFARVTSFNSWIRARI 22
S+ + C + +ARV+S WI+ +I
Sbjct: 142 ASWVATSQCPVNNYSVYARVSSDVDWIQDKI 172
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,669,369
Number of Sequences: 59808
Number of extensions: 287350
Number of successful extensions: 2080
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1874
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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