Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j03r
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    45   5e-05
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    41   8e-04
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    33   0.15 
AL023842-4|CAA19517.2|  229|Caenorhabditis elegans Hypothetical ...    31   0.62 
Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 17/236 (7%)
 Frame = -3

Query: 666 SHSRNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVTTSSVH 487
           S+  NG+  +CGA+++ +   VTAAHC      Q R F       N  +     +    +
Sbjct: 56  SYGDNGQGILCGATVIDDFWLVTAAHC--ALQLQTRSFVYVREPKN--NRERSFSVKEAY 111

Query: 486 LHGSYNMNNLNNDVAIINHNHVGFNNNIQRINLA---SXXXXXXXXXXXXXXXGRTSDAA 316
           +H  YN    +ND+A++  +       I+ + L    S                   + +
Sbjct: 112 IHSGYNNQTADNDIALLRISSDLSKLGIKPVCLVHDDSKLLKQYKNGVVIGYGLTLGEDS 171

Query: 315 SG----ANNQQKRQVSLQVITNAVCARTYG-----NSVIIGSTLCVSGANGRSTCXXXXX 163
           SG     N+Q  +  S+ +I++  C +T+      +  I G  +C +GA    T      
Sbjct: 172 SGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQIC-AGAYLHGTAPGDSG 230

Query: 162 XXXXXXXXXGRQL-IGITSFGSD--RGC--QRGYPAGFARVTSFNSWIRARI*MTT 10
                    G  + IGITS+G+D   G   Q  +P  + R++ +  WI+  I  T+
Sbjct: 231 GPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQGVIGKTS 286


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 6/207 (2%)
 Frame = -3

Query: 636 CGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVTTSSVHLHGSYNMNNL 457
           CG SL+     +TAAHC+  ++ +   +++  G     SG     T +V +H  YN+   
Sbjct: 84  CGGSLIDPNFVLTAAHCF-AKDRRPTSYSVRVGGHRSGSGSPHRVT-AVSIHPWYNIGFP 141

Query: 456 NN-DVAIIN-HNHVGFNNNIQRINLASXXXXXXXXXXXXXXXGRTSDAASGANNQQKRQV 283
           ++ D AI+  H  V  +   + I L S                 ++   S  +    R++
Sbjct: 142 SSYDFAIMRIHPPVNTSTTARPICLPSLPAVENRLCVVTGWG--STIEGSSLSAPTLREI 199

Query: 282 SLQVITNAVCAR--TYGNSVIIGSTLCVSGANGR-STCXXXXXXXXXXXXXXGRQLIGIT 112
            + +++   C+    Y   + + S LC   + G+  +C                +L G+ 
Sbjct: 200 HVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCARDGHWELTGVV 259

Query: 111 SFGSDRGCQR-GYPAGFARVTSFNSWI 34
           S+G   GC R G P  +  V S ++WI
Sbjct: 260 SWGI--GCARPGMPGVYGNVHSASTWI 284


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = -3

Query: 636 CGASLLTNTRSVTAAHCW-RTRNAQARQFTLAFGTANIFSGGTRV-TTSSVHLHGSYNMN 463
           CGAS+L  T  +TAAHC+       + +  +     N   G  ++     +H +  Y  +
Sbjct: 54  CGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYK-D 112

Query: 462 NLNNDVAIINHNHVG--FNNNIQRINLAS 382
             ++D+AI+   + G  FN   Q I L S
Sbjct: 113 IFSHDIAILEIPYPGIEFNEYAQPICLPS 141


>AL023842-4|CAA19517.2|  229|Caenorhabditis elegans Hypothetical
           protein Y44A6D.3 protein.
          Length = 229

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 522 SGGTRVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQ 400
           +   R+   S H  G   +NN+NN+    NHNH   NNNIQ
Sbjct: 68  AAAARLNAQSSHSSGPARLNNMNNN-NNNNHNH-SKNNNIQ 106


>Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.3 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 499 GGDPGAAGEDVSCTKSEGELTSLGVPGSP 585
           GG PG AG+  S     G+    G PGSP
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSP 220


>Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.2 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 499 GGDPGAAGEDVSCTKSEGELTSLGVPGSP 585
           GG PG AG+  S     G+    G PGSP
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSP 220


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,940,996
Number of Sequences: 27780
Number of extensions: 195457
Number of successful extensions: 662
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)