Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j02r
         (488 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023029-1|AAY55445.1|  112|Drosophila melanogaster IP04046p pro...    37   0.017
AE013599-1627|AAF58432.1|  112|Drosophila melanogaster CG13323-P...    37   0.017
AE013599-1628|AAF58431.1|  112|Drosophila melanogaster CG13324-P...    34   0.091
AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-P...    33   0.28 
AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-P...    32   0.37 
AF145126-2|AAF07879.1|  227|Drosophila melanogaster ferritin 2 l...    29   3.4  

>BT023029-1|AAY55445.1|  112|Drosophila melanogaster IP04046p
           protein.
          Length = 112

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 28/94 (29%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
 Frame = -1

Query: 353 ANGLAIGSIAPNDRLL-RSFVVTRAATASSQAVNVRYTXXXXXXXXXXXXXXXXVSQFAT 177
           A G   G    ND LL R+  V      +   VNV Y                  +  A+
Sbjct: 19  AYGATWGRRNNNDYLLSRTTEVRNPIKNNYWNVNVNYPAGFYNISAVIVYDNFKNNSGAS 78

Query: 176 VRLVGGGVGSTFVTLQFRNSARRGYHFNVQIWGR 75
             L  GG G  F T+  R    RG +  V+IWGR
Sbjct: 79  PSLYSGGPGYRFATVNLRGQVNRGINSTVEIWGR 112


>AE013599-1627|AAF58432.1|  112|Drosophila melanogaster CG13323-PA
           protein.
          Length = 112

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 28/94 (29%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
 Frame = -1

Query: 353 ANGLAIGSIAPNDRLL-RSFVVTRAATASSQAVNVRYTXXXXXXXXXXXXXXXXVSQFAT 177
           A G   G    ND LL R+  V      +   VNV Y                  +  A+
Sbjct: 19  AYGATWGRRNNNDYLLSRTTEVRNPIKNNYWNVNVNYPAGFYNISAVIVYDNFKNNSGAS 78

Query: 176 VRLVGGGVGSTFVTLQFRNSARRGYHFNVQIWGR 75
             L  GG G  F T+  R    RG +  V+IWGR
Sbjct: 79  PSLYSGGPGYRFATVNLRGQVNRGINSTVEIWGR 112


>AE013599-1628|AAF58431.1|  112|Drosophila melanogaster CG13324-PA
           protein.
          Length = 112

 Score = 34.3 bits (75), Expect = 0.091
 Identities = 19/62 (30%), Positives = 23/62 (37%)
 Frame = -1

Query: 260 VNVRYTXXXXXXXXXXXXXXXXVSQFATVRLVGGGVGSTFVTLQFRNSARRGYHFNVQIW 81
           VNV Y                  +  A+  L  GG G  F T+  R    RG    V+IW
Sbjct: 51  VNVNYPNGFYNISAVIVYDNFKNNSGASPSLYSGGPGYRFATVNLRGQVNRGIDSTVEIW 110

Query: 80  GR 75
           GR
Sbjct: 111 GR 112


>AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-PA
           protein.
          Length = 122

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -1

Query: 182 ATVRLVGGGVGSTFVTLQFRNSARRGYHFNVQIWG 78
           AT  +  GGVGST VT++F ++   G    V I+G
Sbjct: 86  ATAEITSGGVGSTTVTIKFTSARGAGIKSQVVIYG 120


>AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-PA
           protein.
          Length = 117

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1

Query: 191 SQFATVRLVGGGVGSTFVTLQFRNSARRGYHFNVQIWGR 75
           S  AT  LV GG GS   T++F +    G    V+IWGR
Sbjct: 79  SHGATAVLVSGGPGSKGATIKFTSERGYGIKDIVEIWGR 117


>AF145126-2|AAF07879.1|  227|Drosophila melanogaster ferritin 2
           light chain homolog protein.
          Length = 227

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 150 FNFRHSPVQKLSTKRISLQCTDLGTLSLICPAVKHI 43
           FN RH     +STKR++L+  +L +L+L     K +
Sbjct: 120 FNTRHESSGSVSTKRVTLEVDELHSLALALDTEKQL 155


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,739,319
Number of Sequences: 53049
Number of extensions: 382774
Number of successful extensions: 1060
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)