Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10j02f
         (536 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB018263-1|BAA34440.2| 1091|Homo sapiens KIAA0720 protein protein.     32   1.1  
AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens ...    30   4.5  
AB051472-1|BAB21776.2| 1505|Homo sapiens KIAA1685 protein protein.     30   4.5  

>AB018263-1|BAA34440.2| 1091|Homo sapiens KIAA0720 protein protein.
          Length = 1091

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +3

Query: 270 GRPSPGSRGVPVRDRPPCRGRGRFNFRHSPVQKLSTKRISLQCTDLGTLSLIC 428
           G P PG  G P R  PP R         SP +K   +  +  C D G  + +C
Sbjct: 6   GLPVPGVPGAPARRPPPARHGACSMDDQSPAEKKGLRCQNPACMDKGRAAKVC 58


>AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43705 fis, clone TESOP2001818. ).
          Length = 321

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 222 AGCQREVHGACR*TRQGRPSPGSRGVPVRDRPPCRGRGR 338
           AGC+ +  G  R T +GR SP + GVP R   P   R R
Sbjct: 133 AGCRTQARGQ-RLTSRGRESPEATGVPERRGDPETRRNR 170


>AB051472-1|BAB21776.2| 1505|Homo sapiens KIAA1685 protein protein.
          Length = 1505

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 270 GRPSPGSRGVPVRDRPPCRGRGR 338
           GRP PG   +PV  RP  R +GR
Sbjct: 54  GRPEPGHGSLPVSSRPDMREKGR 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,940,283
Number of Sequences: 237096
Number of extensions: 1426904
Number of successful extensions: 8711
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8689
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)