Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10i23r
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 73 3e-13
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 71 1e-12
SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 68 7e-12
SB_6559| Best HMM Match : adh_short (HMM E-Value=4.3) 60 1e-09
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 60 2e-09
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 59 4e-09
SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 49 4e-06
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 41 9e-04
SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 35 0.077
SB_48498| Best HMM Match : DUF369 (HMM E-Value=2.4) 33 0.18
SB_46283| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_24643| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_24642| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19) 31 1.2
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 30 2.2
SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06) 29 2.9
SB_51034| Best HMM Match : Extensin_2 (HMM E-Value=0.038) 29 5.0
SB_48101| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 28 8.8
SB_37759| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKV---GWSDPIKA-NEMLSKI 517
Y SKAA+ T+A+A + GIRVNA+ P I TE + DP KA + L++
Sbjct: 157 YGTSKAAVIGFTKAIAADYITKGIRVNAVCPGTIYTESLQYRIDSTPDPQKALADFLARQ 216
Query: 516 PLGRFGEISEVVNAVVFLLSERSSMINGVELPIDGGF 406
P GRFG+ EV N VVFL S+ SS I G + +DGG+
Sbjct: 217 PTGRFGKPEEVANVVVFLASDESSFITGQCITVDGGW 253
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 72.5 bits (170), Expect = 3e-13
Identities = 45/100 (45%), Positives = 61/100 (61%)
Frame = -2
Query: 702 LKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLS 523
L D + Y+A+K AL LT+AMALEL + I VNA+ P I T M + SD +K + S
Sbjct: 183 LPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSD-VKPDAEPS 241
Query: 522 KIPLGRFGEISEVVNAVVFLLSERSSMINGVELPIDGGFL 403
IPL RFG E+ + VV+L SE ++ G L +DGGF+
Sbjct: 242 -IPLRRFGATHEIASLVVWLCSEGANYTTGQSLIVDGGFM 280
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/92 (39%), Positives = 56/92 (60%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGR 505
Y+A K A+D++T +A E+ GIRVNA+ P VI TE+ G +P + + +P+GR
Sbjct: 162 YAAVKGAIDSMTLGLAKEVAADGIRVNAVRPGVIETEIHASG-GEPERVARVSQSVPMGR 220
Query: 504 FGEISEVVNAVVFLLSERSSMINGVELPIDGG 409
G EV A+++L SE++S +G L + GG
Sbjct: 221 GGLAREVAEAILWLASEQASYTSGALLDVSGG 252
>SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 68.9 bits (161), Expect = 4e-12
Identities = 37/95 (38%), Positives = 51/95 (53%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGR 505
YS SK L LT+A+A E GIRVN + P VI T + W + ++ +IP+ R
Sbjct: 39 YSISKTTLLGLTKALADECADIGIRVNCVAPGVIKTRFSAALWKNEAMHQKVKERIPMKR 98
Query: 504 FGEISEVVNAVVFLLSERSSMINGVELPIDGGFLA 400
G E+ AV FL S+++S I G + I GG A
Sbjct: 99 LGTSEEIGGAVSFLCSDQASYITGETIVIGGGMTA 133
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 68.1 bits (159), Expect = 7e-12
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSK-IPLG 508
Y+ASKA ++ LT+ A+EL +GIR NAI P I T M + P E + IPLG
Sbjct: 421 YAASKAGVEGLTKVCAIELARFGIRCNAILPGFIDTPMTR---KVPAHITEQIKHFIPLG 477
Query: 507 RFGEISEVVNAVVFLLSERSSMINGVELPIDG 412
RFG+ S + + V FL + SS I G + + G
Sbjct: 478 RFGQPSNIADVVSFLACDESSYITGASIDVTG 509
>SB_6559| Best HMM Match : adh_short (HMM E-Value=4.3)
Length = 253
Score = 60.5 bits (140), Expect = 1e-09
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = -2
Query: 693 HTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTE----MAK-VGWSDPIKANEM 529
+ I + +K ++ L R A L P GI VNA+ P IM++ M + +G +
Sbjct: 150 YAITAQAKGCMELLVRYYAQVLAPRGITVNAVIPGYIMSDAWHNMTRAMGGVSAEPVQKR 209
Query: 528 LSKIPLGRFGEISEVVNAVVFLLSERSSMINGVELPIDGG 409
+ P+ RFGE E V FL S R+S I GV LP+DGG
Sbjct: 210 IQSTPMRRFGEGREFSQVVSFLCSPRASFITGVALPVDGG 249
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/89 (37%), Positives = 49/89 (55%)
Frame = -2
Query: 678 ASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGRFG 499
A++A + LT ++A+E GIR+N + P VI +E A + P ++ +P R G
Sbjct: 188 AARAGVHNLTMSLAVEWISNGIRINNVAPGVIFSETAAANYPIPDLFEKIRQTLPAKRCG 247
Query: 498 EISEVVNAVVFLLSERSSMINGVELPIDG 412
E EV AV FLLS +S I G + +DG
Sbjct: 248 ETEEVSGAVCFLLSPAASYITGSTIKVDG 276
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = -2
Query: 702 LKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLS 523
L +H++Y SKA L T+A+A + P +RVN ++P IM WS+ +A E+L
Sbjct: 158 LANHSVYCVSKAGLHMCTQALAKDFAP-DVRVNGVSPGFIMVPG---DWSEEKEA-EILK 212
Query: 522 KIPLGRFGEISEVVNAVVFL 463
+PLGR GE++++ AV++L
Sbjct: 213 NVPLGRQGELADITEAVLYL 232
>SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 58.0 bits (134), Expect = 7e-09
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = -2
Query: 654 LTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKA--NEMLSKIPLGRFGEISEVV 481
+T+++A E G YG+R NAI P I T+ A DP A + + +IP GRFGEI+E+
Sbjct: 1 MTKSLAAEWGRYGMRFNAIAPGPIETKGA-FSRLDPTGAFRSHAIERIPTGRFGEINEIA 59
Query: 480 NAVVFLLSERSSMING 433
N +L+S+ +S I G
Sbjct: 60 NLAAYLVSDYASWITG 75
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Frame = -2
Query: 693 HTIYSASKAALDALTRAMALELGPYGIRVNAINP---------TVIM------TEMAKVG 559
H YS+SK A+ ++T+ MAL+L IRVN+++P T+++ T++A+
Sbjct: 198 HWTYSSSKGAIISMTKCMALDLAKDHIRVNSLSPGWTYSPEVATILLVTYCIQTQVARAA 257
Query: 558 WSDPIKANEMLSKIP-LGRFGEISEVVNAVVFLLSERSSMINGVELPIDGG 409
D + + L R GE +E+ A+ FL SE +S I +LP+DGG
Sbjct: 258 GDDRARWEPLWGPYHMLNRLGEPAEIAAAISFLCSEDASFITAADLPVDGG 308
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSK-IPL- 511
Y+A+K A++A+T MA +L GIRVN I+P + T M G + ++ E ++K +P
Sbjct: 445 YAATKGAINAMTLPMARDLAKLGIRVNTISPGIFNTPMFMAGRTK--ESREAITKSVPFP 502
Query: 510 ---GRFGEISEVVNAVVFLLSERSSMINGVELPIDG 412
G+ E +++V AV+ + MING + IDG
Sbjct: 503 RRTGKPEEFAQLVQAVI-----ENPMINGEIIRIDG 533
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 41.1 bits (92), Expect = 9e-04
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSK-IPL- 511
YSASK + +T +A +L GIRVN I P + +T + + S P K L+K +P
Sbjct: 174 YSASKGGIVGMTLPIARDLARNGIRVNTIAPGLFLTPLLE---SLPEKVRIALAKTVPFP 230
Query: 510 GRFGEISEVVNAVVFLLSERSSMINGVELPIDG 412
R G E + V ++ + M+NG + IDG
Sbjct: 231 PRLGHPDEYAHLVQSVM--ENPMMNGETIRIDG 261
>SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = -2
Query: 672 KAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWS---DPIKA-NEMLSKIPLGR 505
K A+ ++TRA+A++ YG+RVN+++ ++T + + S D KA + + LGR
Sbjct: 63 KGAITSMTRALAIDEAAYGVRVNSLSIGNVLTPLWESNASATPDYKKAIQDGMDAQLLGR 122
Query: 504 FGEISEVVNAVVFLLSERSSMINGVELPIDGG 409
G + E A ++L ++ ++ G +L + GG
Sbjct: 123 MGTLHESGQACLYLAAD-ATFTTGTDLLLTGG 153
>SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 687 IYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 571
+Y SK A++A + A+ LEL P+G++V + P TEM
Sbjct: 44 VYCISKFAVEAFSSALRLELEPWGVKVIVVEPGGYRTEM 82
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 34.7 bits (76), Expect = 0.077
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 571
YSASK A+ + + A+ +E+ P+G+ V+ I+P T +
Sbjct: 695 YSASKYAVQSFSDALRIEMRPFGVSVHIIDPGFFKTNL 732
>SB_48498| Best HMM Match : DUF369 (HMM E-Value=2.4)
Length = 734
Score = 33.5 bits (73), Expect = 0.18
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +2
Query: 377 DNIFRYYVARKPPSMGNST-PLIILDLSLRRKTTAFTTSDISPNLPSGILESISLAFIGS 553
+N ++ ++P + G+S+ + I + SL ++++FT + S PS +L I F S
Sbjct: 434 NNSLNLFIKQRPQATGSSSLTVFIEESSLLCRSSSFTIAVHSGCPPSKMLHFI-YPFTAS 492
Query: 554 DQPTLAISVIITVGLIAFTLIPYG---PSSKAI 643
+ LA +V T+G++ +PY PS++ +
Sbjct: 493 EDALLASTVKDTLGVVRNKKLPYNYRPPSARGV 525
>SB_46283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 615 IRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGR 505
IRVN +NPTV+ T+ AK + K PLGR
Sbjct: 1 IRVNTVNPTVVWTDAAKKAFGTREGCKMFEEKCPLGR 37
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 687 IYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMA 568
IY ASK A++ AMA LG + I+ I P + T A
Sbjct: 186 IYCASKFAVEGYAEAMAPVLGKFNIKTTIIEPGPVATNFA 225
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 571
Y ASK+AL+ ++++M+++L GI V ++P + T+M
Sbjct: 133 YRASKSALNIISKSMSVDLKGDGISVVMLHPGWVQTDM 170
>SB_24643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 31.5 bits (68), Expect = 0.72
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 571
Y ASK+AL+ ++++M+++L GI V ++P + T+M
Sbjct: 181 YRASKSALNIVSKSMSVDLKGDGISVVILHPGWVQTDM 218
>SB_24642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 571
Y ASK++L+ ++++M+++L GI V ++P + T+M
Sbjct: 176 YRASKSSLNIISKSMSVDLKGDGISVVMLHPGWVQTDM 213
>SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19)
Length = 494
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 365 VFWYDNIFRYYVARKPPSMGNSTPLIILDLSLRRKTTAFTT 487
++WY NI++ + + M N+T +I++L++ T TT
Sbjct: 94 IYWYVNIYQNSILTRNQRMKNATNYLIVNLAVSELVTVCTT 134
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 571
YS +K ++A + + E+ P+G+RV+ I P T +
Sbjct: 534 YSITKYGVEAFSDVLRREMFPWGVRVSIIEPQAFKTPL 571
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 571
YS +K ++A + + E+ P+G+RV+ I P T +
Sbjct: 61 YSITKYGVEAFSDVLRREMLPWGVRVSIIEPQAFKTPL 98
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 571
YS +K ++A + + E+ P+G+RV+ I P T +
Sbjct: 227 YSITKYGVEAFSDVLRREMLPWGVRVSIIEPQAFKTPL 264
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINP 592
YS +K ++A + A+ E+ P+G+RV I P
Sbjct: 91 YSITKYGVEAFSDALRREMSPWGVRVIIIEP 121
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -2
Query: 684 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSD 550
YSA+K L L+ +A E Y I+ NAI P V + + K SD
Sbjct: 165 YSAAKLGLVGLSNTLAQEGAKYNIKCNAIAP-VAGSRLTKTVMSD 208
>SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06)
Length = 251
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 678 ASKAALDALTRAMALELGPYGIRVNAINPTVIMT 577
ASK AL+ +T++++++L GI A+NP + T
Sbjct: 174 ASKCALNMVTKSLSVDLKKDGILAVAVNPGFVKT 207
>SB_51034| Best HMM Match : Extensin_2 (HMM E-Value=0.038)
Length = 354
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 410 PPSMGNSTPLIILDLSLRRKTTAFTTSDISPNLPSGILESISLAFIGSDQPTLAISVII 586
PPS S ++DL R + T N P+ +ESI L + + P + +I
Sbjct: 178 PPSTATSLRSTVIDLPSPRTSARMTRKRARSNTPASSVESIDLNLLIRNSPDSLLGGLI 236
>SB_48101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = -2
Query: 657 ALTRAMALELGPYGIRVNAINPTVIM-TE-MAKVG 559
A+ + +A+E GP G+RVN + P I TE M+++G
Sbjct: 2 AMVKHLAVEWGPQGVRVNCVAPGPIEDTEGMSRLG 36
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 187 LTSSFATTSEKIFDIFLVIHIWPKIFYSIFNLWLFSLCSF 306
L S T+ K++ I + +WP +F S W + SF
Sbjct: 1242 LRSLHFTSGSKVYLIISIAWVWPAVFSSCSPTWSYDRGSF 1281
>SB_37759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 470 TTAFTTSDISPNLPSGILESISLAFIGSDQPTLAISVIITVGLIAFTLI 616
TT TT+ ++ L + L+ I+L D TLA + + T L+ TL+
Sbjct: 96 TTLVTTTLVTTTLVTTTLDIITLITTTLDITTLATTTLATTTLVTTTLV 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,492,230
Number of Sequences: 59808
Number of extensions: 366347
Number of successful extensions: 859
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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