Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i21r
         (705 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50199-6|AAA91266.1|  470|Caenorhabditis elegans Vacuolar h atpa...   128   4e-30
U41109-12|AAB37043.1|  451|Caenorhabditis elegans Hypothetical p...   111   5e-25
AF144639-1|AAD44756.1|  552|Caenorhabditis elegans sphingosine-1...    29   2.4  
AF100673-6|AAC69001.1|  552|Caenorhabditis elegans Sphingosine p...    29   2.4  
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AC024799-1|AAK72316.1|  349|Caenorhabditis elegans Serpentine re...    28   7.5  

>U50199-6|AAA91266.1|  470|Caenorhabditis elegans Vacuolar h atpase
           protein 15 protein.
          Length = 470

 Score =  128 bits (309), Expect = 4e-30
 Identities = 57/84 (67%), Positives = 69/84 (82%)
 Frame = -2

Query: 704 LRTLVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRY 525
           ++ L+ LLE S DP++L VA +DIGEYVRHYPRGK ++EQ  GK  VM LL+ +DPNVRY
Sbjct: 378 VKILIKLLESSHDPLILCVASHDIGEYVRHYPRGKTVVEQYQGKAAVMRLLTAEDPNVRY 437

Query: 524 EALLAVQKLMVHNWEYLGKQLEKE 453
            ALLAVQKLMVHNWEYLGKQL+ +
Sbjct: 438 HALLAVQKLMVHNWEYLGKQLDSD 461


>U41109-12|AAB37043.1|  451|Caenorhabditis elegans Hypothetical
           protein F52E1.10 protein.
          Length = 451

 Score =  111 bits (267), Expect = 5e-25
 Identities = 51/81 (62%), Positives = 66/81 (81%)
 Frame = -2

Query: 704 LRTLVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRY 525
           L+ LV +LEKS DP+VL VA +DIGE+VR+YPRGK  +EQLGGK+ +M LL+  DPNVRY
Sbjct: 371 LKLLVAMLEKSNDPLVLCVAAHDIGEFVRYYPRGKLKVEQLGGKEAMMRLLTVKDPNVRY 430

Query: 524 EALLAVQKLMVHNWEYLGKQL 462
            ALLA QKLM++NW+ LG ++
Sbjct: 431 HALLAAQKLMINNWKDLGLEI 451


>AF144639-1|AAD44756.1|  552|Caenorhabditis elegans
           sphingosine-1-phosphate lyase protein.
          Length = 552

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
 Frame = -2

Query: 695 LVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQ--LGGKQRVMYLLSHDDPNVRYE 522
           +VHL  KS DP++  +  Y +   +R  P  +  IE+     K +++  +  DD + ++ 
Sbjct: 48  VVHLYRKSEDPILKRMGAY-VFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFI 106

Query: 521 ALLAVQKLMVHNWEYLGKQLEK-EQIDKQAGTVVGA 417
           + L +  L   +   L K+ E     +   G V GA
Sbjct: 107 STLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGA 142


>AF100673-6|AAC69001.1|  552|Caenorhabditis elegans Sphingosine
           phosphate lyase protein1 protein.
          Length = 552

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
 Frame = -2

Query: 695 LVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQ--LGGKQRVMYLLSHDDPNVRYE 522
           +VHL  KS DP++  +  Y +   +R  P  +  IE+     K +++  +  DD + ++ 
Sbjct: 48  VVHLYRKSEDPILKRMGAY-VFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFI 106

Query: 521 ALLAVQKLMVHNWEYLGKQLEK-EQIDKQAGTVVGA 417
           + L +  L   +   L K+ E     +   G V GA
Sbjct: 107 STLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGA 142


>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
            F36H2.3 protein.
          Length = 1388

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 586  CSMMCLPRG*WRTYSPMS*QATASTTGS 669
            CS + +P G   TYSP S   T+ T+G+
Sbjct: 1055 CSALTIPSGAQATYSPFSLSTTSFTSGT 1082


>AC024799-1|AAK72316.1|  349|Caenorhabditis elegans Serpentine
           receptor, class x protein4 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 21/73 (28%), Positives = 38/73 (52%)
 Frame = +1

Query: 298 IIEHIRIVYEFVTAFYQCNNSNKLYIFLIYNVMS*KIYALAPTTVPACLSICSFSSCLPR 477
           I+  I I+  F  AF  C   N +YI   +N++S  ++ ++  T  +  SI + SS L  
Sbjct: 22  ILNLITIIAVFRLAF--CKRKNPVYIVSFFNILS-DVFQVSAATFYSAPSIIT-SSFLTS 77

Query: 478 YSQL*TISFCTAS 516
           +S+  T++   +S
Sbjct: 78  FSKTNTLNTTLSS 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,548,904
Number of Sequences: 27780
Number of extensions: 316868
Number of successful extensions: 746
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)