Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i19r
         (641 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RB65 Cluster: Putative uncharacterized protein PY0628...    37   0.48 
UniRef50_Q6LF33 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q7RB65 Cluster: Putative uncharacterized protein PY06283;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY06283 - Plasmodium yoelii yoelii
          Length = 1057

 Score = 36.7 bits (81), Expect = 0.48
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = -3

Query: 396 LSVVKNIEHTNNSQT*SVSIAISTLCNVYXFF--IYLKTNNNIALLFTSCIADLLPKN 229
           L ++KNI+ TNN+     ++    L N +  +  I+  TNNNI  L  + I DLL KN
Sbjct: 23  LKIIKNIDDTNNN----TNLIEGNLTNFFSHYSHIFQDTNNNIPNLVENTINDLLKKN 76


>UniRef50_Q6LF33 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 540

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -1

Query: 431 NFFTSHLRKTQHCLSLKTLNIQIILRLD 348
           NF   ++RK +HC ++K  NI+II+ L+
Sbjct: 223 NFLIYNIRKIEHCENIKNTNIKIIINLE 250


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,982,202
Number of Sequences: 1657284
Number of extensions: 5624756
Number of successful extensions: 7132
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7131
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)