Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i19f
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   3.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.6  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      22   4.8  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.3  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 604 KLIKIKAMNTATLVVNIVSMTRSTLVITTGTV 509
           K+I  K   T T++   + MT++ LV   GT+
Sbjct: 72  KIIPNKNDGTLTIIDTGIGMTKADLVHNLGTI 103


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 188 RQYVQDDQV*WPNRTHFLYHLS 123
           + YVQ  Q   PN  H+ YH S
Sbjct: 375 QNYVQGYQGEHPNYNHYGYHYS 396


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +3

Query: 249 PSIIVKMEEYKYVDVSXEGSGLELNDAFKISSXNEQLAWAEWNSSNLYEKHDSTW 413
           P +    EE+ +  V+  GS    N A KI     +   +E N  N Y  H  T+
Sbjct: 324 PGMPNDFEEFVHPTVAKRGSITSKNVANKIRDFYYEGPNSENNLDNFYLIHTDTY 378


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 188 RQYVQDDQV*WPNRTHFLYHLS 123
           + YVQ  Q   PN  H+ YH S
Sbjct: 323 QNYVQGYQGEHPNYNHYGYHYS 344


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 363 WAEWNSSNLYEKHDSTWKGK 422
           W+ W      E  DS W+G+
Sbjct: 2   WSLWKVRGRCEGKDSKWRGE 21


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 344 RTDFERVI*LQARTFXRYIDVFVFFHFDDYTWRR 243
           R+ FER    Q  T  + +++   FHF+ Y  RR
Sbjct: 237 RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 270


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 344 RTDFERVI*LQARTFXRYIDVFVFFHFDDYTWRR 243
           R+ FER    Q  T  + +++   FHF+ Y  RR
Sbjct: 239 RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 272


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 414 STCCRVFRKGSTSSIRP 364
           +TC ++FR   +S++RP
Sbjct: 892 ATCEKLFRMKKSSALRP 908


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,502
Number of Sequences: 336
Number of extensions: 3340
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)