Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i19f
         (622 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0151 + 8955617-8955733,8956771-8956885,8957247-8957269,895...    33   0.14 
07_01_0570 + 4228567-4228852,4229198-4229217                           31   0.97 
06_01_0785 - 5873244-5873357,5873458-5873562,5874333-5874424,587...    30   1.3  
09_06_0030 - 20341141-20341235,20341336-20341469,20341563-20341684     29   2.3  
01_05_0579 + 23393632-23393734,23393765-23394513,23395958-233963...    28   6.9  
03_05_1140 + 30699054-30699533,30699627-30699708,30700265-30700428     27   9.1  

>05_03_0151 +
           8955617-8955733,8956771-8956885,8957247-8957269,
           8958161-8958164,8958269-8958366
          Length = 118

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 22/66 (33%), Positives = 34/66 (51%)
 Frame = -1

Query: 604 KLIKIKAMNTATLVVNIVSMTRSTLVITTGTVPLVTENVSASLFTSSTKFVLPIKFPLTR 425
           K I +K  +T  L+  +++  RS L I T  +  VTE  S SL+    + VL     L  
Sbjct: 38  KKIGVKTQDTYALLT-MINHCRSILYIETQLLKYVTEKESDSLYVGIIQVVLRQPAMLQH 96

Query: 424 ILPFHV 407
           ILP+++
Sbjct: 97  ILPYNI 102


>07_01_0570 + 4228567-4228852,4229198-4229217
          Length = 101

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +2

Query: 497 RHQRYGARGDHEGRTGHRHDIHH 565
           RH R G RGDH G  G  H I H
Sbjct: 24  RHYRDGWRGDHHGGHGQEHIISH 46


>06_01_0785 -
           5873244-5873357,5873458-5873562,5874333-5874424,
           5874525-5874594,5875080-5875202,5875287-5875372,
           5875547-5875648,5875874-5876096,5876217-5876282,
           5876407-5876497,5876574-5876701,5877734-5877749,
           5878171-5878318,5878440-5878511,5878586-5878690,
           5879122-5879291,5880093-5880424
          Length = 680

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +3

Query: 333 KISSXNEQLAWAEWNSSNLYEKHDSTWKGKIRVNGNFIGRTNLVLEV 473
           +I   N+++AW EW+  N+       W G    +G+   R     EV
Sbjct: 242 RIDHNNKRMAWIEWSHPNMPWDKSELWVGYFSESGDLTKRVEHTNEV 288


>09_06_0030 - 20341141-20341235,20341336-20341469,20341563-20341684
          Length = 116

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +3

Query: 285 VDVSXEGSGLEL----NDAFKISSXNEQLAWAEWNSSNLYEKHDSTW 413
           VDV+  G  LEL    ND F  S+      + EW  + +YE  D  W
Sbjct: 61  VDVAAYGDYLELVEALNDMFYCSTIGLMDGYGEWEHAVVYEDGDGDW 107


>01_05_0579 +
           23393632-23393734,23393765-23394513,23395958-23396315,
           23396830-23396852
          Length = 410

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 512 GARGDHEGRTGHRHDIHHQRCC 577
           G  G   G +G RH +HH+R C
Sbjct: 190 GVEGARVGVSGARHRLHHRRVC 211


>03_05_1140 + 30699054-30699533,30699627-30699708,30700265-30700428
          Length = 241

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 581 EHSNA-GGEYRVYDPFDPRDHHGHRTVGDGKRI 486
           +HSN  G E+R++  +DP D  G     DG  +
Sbjct: 209 QHSNKLGNEFRLFTNYDPEDRLGGWEQNDGATV 241


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,082,255
Number of Sequences: 37544
Number of extensions: 362141
Number of successful extensions: 950
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)