Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i19f
         (622 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY032950-1|AAK44211.1| 1865|Homo sapiens LTRPC7 protein.               30   7.6  
AF346629-1|AAK19738.2| 1864|Homo sapiens channel-kinase 1 protein.     30   7.6  

>AY032950-1|AAK44211.1| 1865|Homo sapiens LTRPC7 protein.
          Length = 1865

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 21/81 (25%), Positives = 39/81 (48%)
 Frame = +3

Query: 366  AEWNSSNLYEKHDSTWKGKIRVNGNFIGRTNLVLEVKRDADTFSVTNGTVPVVITRVERV 545
            A+WN +N Y+ H       + V G  I   N++    R  D  +V     P V+  + ++
Sbjct: 945  AKWNFANAYDNH-------VFVAGRLIYCLNIIFWYVRLLDFLAVNQQAGPYVM-MIGKM 996

Query: 546  IDTIFTTSVAVFIALIFINFG 608
            +  +F   + V +AL+ ++FG
Sbjct: 997  VANMF--YIVVIMALVLLSFG 1015


>AF346629-1|AAK19738.2| 1864|Homo sapiens channel-kinase 1 protein.
          Length = 1864

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 21/81 (25%), Positives = 39/81 (48%)
 Frame = +3

Query: 366  AEWNSSNLYEKHDSTWKGKIRVNGNFIGRTNLVLEVKRDADTFSVTNGTVPVVITRVERV 545
            A+WN +N Y+ H       + V G  I   N++    R  D  +V     P V+  + ++
Sbjct: 945  AKWNFANAYDNH-------VFVAGRLIYCLNIIFWYVRLLDFLAVNQQAGPYVM-MIGKM 996

Query: 546  IDTIFTTSVAVFIALIFINFG 608
            +  +F   + V +AL+ ++FG
Sbjct: 997  VANMF--YIVVIMALVLLSFG 1015


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,918,500
Number of Sequences: 237096
Number of extensions: 1985783
Number of successful extensions: 3377
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3360
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)