Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10i19f
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82269-8|CAJ76946.1| 185|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL021487-16|CAJ76947.1| 185|Caenorhabditis elegans Hypothetical... 28 4.7
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 28 4.7
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 28 4.7
AC024856-1|ABB51172.1| 334|Caenorhabditis elegans Hypothetical ... 28 4.7
Z77134-2|CAB00873.1| 877|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF016657-14|AAB93663.3| 495|Caenorhabditis elegans Hypothetical... 27 8.2
>Z82269-8|CAJ76946.1| 185|Caenorhabditis elegans Hypothetical
protein Y45F10B.13c protein.
Length = 185
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 348 NEQLAWAEWNSSNLYEKHDSTWKGKI 425
+E W + + L EKH++TWKG++
Sbjct: 112 DENWKWRDESGRLLDEKHNNTWKGEL 137
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 348 NEQLAWAEWNSSNLYEKHDSTWKGKI 425
+E W + + L EKH++TWKG++
Sbjct: 545 DENWKWRDESGRLLDEKHNNTWKGEL 570
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 348 NEQLAWAEWNSSNLYEKHDSTWKGKI 425
+E W + + L EKH++TWKG++
Sbjct: 560 DENWKWRDESGRLLDEKHNNTWKGEL 585
>AL021487-16|CAJ76947.1| 185|Caenorhabditis elegans Hypothetical
protein Y45F10B.13c protein.
Length = 185
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 348 NEQLAWAEWNSSNLYEKHDSTWKGKI 425
+E W + + L EKH++TWKG++
Sbjct: 112 DENWKWRDESGRLLDEKHNNTWKGEL 137
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 348 NEQLAWAEWNSSNLYEKHDSTWKGKI 425
+E W + + L EKH++TWKG++
Sbjct: 545 DENWKWRDESGRLLDEKHNNTWKGEL 570
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 348 NEQLAWAEWNSSNLYEKHDSTWKGKI 425
+E W + + L EKH++TWKG++
Sbjct: 560 DENWKWRDESGRLLDEKHNNTWKGEL 585
>AC024856-1|ABB51172.1| 334|Caenorhabditis elegans Hypothetical
protein Y71G10AR.4 protein.
Length = 334
Score = 28.3 bits (60), Expect = 4.7
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Frame = +3
Query: 156 PLHLIVLYVLALCPLWVICQNVPRLTAVFSPPSIIVKMEEYKYVDVSX---------EGS 308
P+ LI+ +L L V + +T +SP SI +EEY DV+ E
Sbjct: 10 PMVLIIRLLLQLSST-VSAELSRSMTLTYSPQSIH-DLEEYGSTDVNVTLKFPKNEFETE 67
Query: 309 GLELNDAFKISSXNEQLAWAEWNSSNL----YEKHDSTWKGK--IRVNGNFIGRTNLVLE 470
+E + A ++S + + A A++N+ L + + ++ + I +NGN +G+T + +
Sbjct: 68 NIE-HYALSVNSFHPETATADYNTEKLKTEQFRLNGQFYETETIITINGNLLGKTAMKMR 126
Query: 471 VKRDADTFSVT 503
+ A+ ++ T
Sbjct: 127 LVPAAEYYNET 137
>Z77134-2|CAB00873.1| 877|Caenorhabditis elegans Hypothetical
protein R09H10.4 protein.
Length = 877
Score = 27.9 bits (59), Expect = 6.2
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Frame = +3
Query: 267 MEEYKYVDVSXEGSGLELNDAFKISSXNEQLAWAE---WNSSNLYEKHD--STWKGKIRV 431
+EE + ++ + + F ++ +E LAW E WN ++K+ S + +
Sbjct: 573 LEEMEMMEDEEGDTNKTALEPFSKAAMSEFLAWPEFQHWNGFVKFDKNGMLSKYWATVSY 632
Query: 432 NGNFIG----RTNLVLEVKRDADTFSVTNGTV-----PVVITRVERVIDTIFTTSVAVFI 584
+G +G R ++ + AD F+ N ++ P V T +E ++ +TSV I
Sbjct: 633 HGEGLGDFQVRRRMLNRWRATADQFAPLNVSIFDDYAPFVDT-LETILPATISTSVCTLI 691
Query: 585 ALIFINF 605
++ + F
Sbjct: 692 CMMIVCF 698
>AF016657-14|AAB93663.3| 495|Caenorhabditis elegans Hypothetical
protein C16C4.13 protein.
Length = 495
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 381 SNLYEKHDSTWKGKIRVNGNFIGRTNLVLEVKRDADT 491
S++Y +HD WK ++ F+G NL E K ++T
Sbjct: 26 SDIYVRHDIPWKIRVFKKDGFLG-ANLHCEKKECSET 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,650,255
Number of Sequences: 27780
Number of extensions: 316081
Number of successful extensions: 974
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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