Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i17r
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    25   0.40 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   2.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   3.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   3.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   8.7  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 0.40
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +2

Query: 14  VCLCNGALHCESS--VHAAFSRSISRY 88
           VCLC  ++H ESS  +   FS S S Y
Sbjct: 211 VCLCGASVHSESSKVLPLLFSVSSSSY 237


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 43  RIFCSRCVLSFHIKVPNVNMGTTITK 120
           R+FCS     +      V++GTT+ K
Sbjct: 54  RLFCSEAAALWPKPTGEVHVGTTLVK 79


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 33  LSTANLLFTLRSLVPYQGTKCKHGYNNNKKS 125
           +ST+N L+T  S +    T     +N +  S
Sbjct: 31  ISTSNYLYTPSSTIDLYNTSSVSNFNESSSS 61


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 33  LSTANLLFTLRSLVPYQGTKCKHGYNNNKKS 125
           +ST+N L+T  S +    T     +N +  S
Sbjct: 31  ISTSNYLYTPSSTIDLYNTSSVSNFNESSSS 61


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = +2

Query: 335 SYLPYLQSITEFNRQFVMKT 394
           SYLP+++++ +  ++F  +T
Sbjct: 33  SYLPFIRALGKSKKEFKTRT 52


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = +2

Query: 335 SYLPYLQSITEFNRQFVMKT 394
           SYLP+++++ +  ++F  +T
Sbjct: 266 SYLPFIRALGKSKKEFKTRT 285


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = +2

Query: 335 SYLPYLQSITEFNRQFVMKT 394
           SYLP+++++ +  ++F  +T
Sbjct: 266 SYLPFIRALGKSKKEFKTRT 285


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 237 PGVCSLFQELPSH 275
           P +C L Q +P+H
Sbjct: 262 PVLCKLIQSIPTH 274


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +1

Query: 247 VLCFKNSRLISARLEAWVLIRLSSASDKP*LFAIFTVNYRI*SAIRNE 390
           V  F ++ +I   L+  +L  ++ A     L  ++T+NY    + RN+
Sbjct: 89  VFIFCSAPIIITILDIEILGYVNKAKFGKLLINLYTINYNFKESERND 136


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 144 QAN*FVWIFCYC 109
           Q N  V+ FCYC
Sbjct: 545 QFNTIVFAFCYC 556


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,649
Number of Sequences: 336
Number of extensions: 2252
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)