Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i17r
         (427 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g50580.1 68414.m05679 glycosyltransferase family protein simi...    28   2.3  
At1g64910.1 68414.m07358 glycosyltransferase family protein cont...    28   3.0  
At1g08140.1 68414.m00896 cation/hydrogen exchanger (CHX6a) Note:...    27   4.0  
At1g22620.1 68414.m02824 phosphoinositide phosphatase family pro...    27   5.3  
At5g44510.1 68418.m05453 disease resistance protein (TIR-NBS-LRR...    27   7.0  
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ...    27   7.0  
At1g69220.2 68414.m07926 serine/threonine protein kinase, putati...    27   7.0  
At5g63760.2 68418.m08003 IBR domain-containing protein contains ...    26   9.3  
At5g63760.1 68418.m08002 IBR domain-containing protein contains ...    26   9.3  
At5g53990.1 68418.m06716 glycosyltransferase family protein cont...    26   9.3  
At2g40160.1 68415.m04939 expressed protein                             26   9.3  

>At1g50580.1 68414.m05679 glycosyltransferase family protein similar
           to UDP rhamnose: anthocyanidin-3-glucoside
           rhamnosyltransferase GB:CAA81057 GI:397567 from [Petunia
           x hybrida]; contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 448

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = -3

Query: 266 EFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVP 102
           +FL+ R N W N  E G V   A       +  QF+ F +        F + V+P
Sbjct: 236 KFLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELMGLPFLISVMP 290


>At1g64910.1 68414.m07358 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 447

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 260 LKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVP 102
           L+ R + W N  E G V   AL   ++++  QF+   +    +   FFV V P
Sbjct: 237 LEDRWSHWLNGFEQGSVVFCALGSQVTLEKDQFQELCLGIELTGLPFFVAVTP 289


>At1g08140.1 68414.m00896 cation/hydrogen exchanger (CHX6a) Note:
           CHX6a and CHX6b were originally 1 gene but were split
           pased on alignments with other family members; may be a
           pseudogene and requires futher investigation; monovalent
           cation:proton antiporter family 2 (CPA2) member,
           PMID:11500563
          Length = 818

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 155 FTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQR 57
           F   KR+S+ GF  +++P+   G+L +  R +R
Sbjct: 149 FRTEKRSSVIGFITVIIPLIC-GSLTFRYRERR 180


>At1g22620.1 68414.m02824 phosphoinositide phosphatase family
           protein contains similarity to phosphoinositide
           phosphatase SAC1 [Rattus norvegicus]
           gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
           SacI homology domain; identical to cDNA SAC domain
           protein 1 (SAC1)  SAC1-FRA7 allele, GI:31415718
          Length = 912

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -3

Query: 350 NMANNYGLSDAELNLIKTQASRRAEM--RREF 261
           ++ N YG     LNLIKT   R  EM  RREF
Sbjct: 347 DLVNRYGNPIIVLNLIKTVEKRPREMVLRREF 378


>At5g44510.1 68418.m05453 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1187

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 192 LQCCVENITSLRSVFPGVCSLFQELPS 272
           L   + NIT+L+S++   CS  +ELPS
Sbjct: 887 LPSSIWNITNLQSLYLNGCSSLKELPS 913


>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
           family protein / PAN domain-containing protein contains
           Pfam profiles: PF01453 lectin (probable mannose
           binding), PF00024 PAN domain
          Length = 764

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 63  RSLVPYQGTKCKHGYNNNK-KSKQTSSLVYGKIFKLCYFHGQKPLQCCVEN 212
           + LVPYQ   CK G+N  K K+ +   +       +     Q+  + C+EN
Sbjct: 322 KCLVPYQKPGCKSGFNMVKFKNLELYGIYPANDSVISQISSQRCKKLCLEN 372


>At1g69220.2 68414.m07926 serine/threonine protein kinase, putative
           identical to serine/threonine kinase [Arabidopsis
           thaliana] gi|2352084|gb|AAB68776
          Length = 809

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +3

Query: 24  VTELSTANLLFTLRSLVPYQGTKCKHGYNNNKKSKQTSSLVYGKIFK 164
           V  +  +N     R L P   +   HG +N K  +Q     YG ++K
Sbjct: 192 VASMQKSNFGGKTRKLDPSSSSSKLHGEDNRKMQQQNRKGSYGSVYK 238


>At5g63760.2 68418.m08003 IBR domain-containing protein contains
           similarity to Swiss-Prot:Q94981 ariadne-1 protein
           (Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR
           domain
          Length = 452

 Score = 26.2 bits (55), Expect = 9.3
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +1

Query: 46  IFCSRCVLSFHIKVPNVNMGTTITKNPNKLVRLFTVKYSNCVTFMDRN 189
           IFC RC+L  H  V   N    ++++  KL+    V   + V+++D N
Sbjct: 159 IFCWRCMLESHRPVTCNNASDWLSRDLEKLIE--EVDKPSTVSWIDAN 204


>At5g63760.1 68418.m08002 IBR domain-containing protein contains
           similarity to Swiss-Prot:Q94981 ariadne-1 protein
           (Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR
           domain
          Length = 452

 Score = 26.2 bits (55), Expect = 9.3
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +1

Query: 46  IFCSRCVLSFHIKVPNVNMGTTITKNPNKLVRLFTVKYSNCVTFMDRN 189
           IFC RC+L  H  V   N    ++++  KL+    V   + V+++D N
Sbjct: 159 IFCWRCMLESHRPVTCNNASDWLSRDLEKLIE--EVDKPSTVSWIDAN 204


>At5g53990.1 68418.m06716 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 447

 Score = 26.2 bits (55), Expect = 9.3
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = -3

Query: 260 LKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVP 102
           L+ R N W N  + G V   AL   ++++  QF+   +    +   F V V P
Sbjct: 237 LEDRWNHWLNQFKPGSVIYCALGSQITLEKDQFQELCLGMELTGLPFLVAVKP 289


>At2g40160.1 68415.m04939 expressed protein
          Length = 427

 Score = 26.2 bits (55), Expect = 9.3
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 134 SLFGFFVIVVPMFTFGTLIWNERTQR 57
           SL  F VI++P+F  G  ++NE+  R
Sbjct: 14  SLLYFAVILLPVFLLGCYLYNEKQLR 39


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,193,881
Number of Sequences: 28952
Number of extensions: 182275
Number of successful extensions: 536
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 665183504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)