Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i17f
         (490 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6IDF5 Cluster: RE22403p; n=6; Endopterygota|Rep: RE224...    89   6e-17
UniRef50_UPI0000518EA8 Cluster: PREDICTED: similar to CG12859-PA...    48   1e-04
UniRef50_Q86FD0 Cluster: Clone ZZD251 mRNA sequence; n=2; Schist...    44   0.001
UniRef50_Q23098 Cluster: Putative uncharacterized protein; n=2; ...    42   0.010
UniRef50_A5ZRN4 Cluster: Putative uncharacterized protein; n=1; ...    34   1.5  
UniRef50_A5EWY5 Cluster: Putative uncharacterized protein; n=1; ...    33   2.6  
UniRef50_Q54CX6 Cluster: 3-hydroxyisobutyrate dehydrogenase; n=3...    33   4.5  
UniRef50_UPI0000E45D13 Cluster: PREDICTED: similar to Y-linked z...    32   7.9  
UniRef50_Q22A79 Cluster: Putative uncharacterized protein; n=1; ...    32   7.9  

>UniRef50_Q6IDF5 Cluster: RE22403p; n=6; Endopterygota|Rep: RE22403p
           - Drosophila melanogaster (Fruit fly)
          Length = 113

 Score = 88.6 bits (210), Expect = 6e-17
 Identities = 43/109 (39%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
 Frame = +3

Query: 99  LSDAELNLIKTQASRRAEMRREFLKQRTNPWKNAS-EAGYVFDTALQRFLSMKVTQFEYF 275
           LS+ E   IK +     ++R+EFLKQ +NP+++A+ E G VFD  L RF +M+V+ +E+F
Sbjct: 3   LSNEEQEFIKRKHEATLKLRQEFLKQSSNPYRHATGEGGTVFDAGLARFQAMRVSNYEHF 62

Query: 276 TVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRSGELRYKDRLFK 422
               ++   G F +V+P+  +   +  ER  RE+K R+G++ YKDR FK
Sbjct: 63  KPTGKSFRTGLFAVVLPIALYAWALKAERDGREEKYRTGQVAYKDRQFK 111


>UniRef50_UPI0000518EA8 Cluster: PREDICTED: similar to CG12859-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG12859-PA - Apis mellifera
          Length = 117

 Score = 48.0 bits (109), Expect = 1e-04
 Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
 Frame = +3

Query: 93  YGLSDAELNLIKTQASRRAEMRREFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEY 272
           + +S  +  +I+ + +RR E+R+++LK+  NP K         ++A+ R   +++ Q EY
Sbjct: 10  FDVSPKQREIIQWRDARRKELRQKYLKEIHNPMKQTMPV----ESAVMRLNGLRL-QHEY 64

Query: 273 FT-VNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRSGELRYKDRLFKLA 428
            T V     L   F+++  MF    L+   +   E   R+G++ Y DR FK +
Sbjct: 65  ITRVRLYPHLTSAFMLIGSMFAGVLLLTKLKDDNEHLYRTGQISYADREFKFS 117


>UniRef50_Q86FD0 Cluster: Clone ZZD251 mRNA sequence; n=2;
           Schistosoma japonicum|Rep: Clone ZZD251 mRNA sequence -
           Schistosoma japonicum (Blood fluke)
          Length = 125

 Score = 44.4 bits (100), Expect = 0.001
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
 Frame = +3

Query: 78  NMANNYGLSDAELNLIKTQASRRAEMRREFLKQRTNPWKNASEAGYVFDTALQRFLSMKV 257
           N  N++  S  E   IK +A  R  M+ E+ K+ TNP+K     G+V D ALQR  S +V
Sbjct: 10  NPWNSFYESPEEQEAIKERAKIRDAMKAEYRKRYTNPFK--PPLGFVHDPALQRQFSAQV 67

Query: 258 TQFEYFTVNKRTSLF--GFF 311
           T  E+   + +  L   GFF
Sbjct: 68  TFAEFLRPSPKLGLIAAGFF 87


>UniRef50_Q23098 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 172

 Score = 41.5 bits (93), Expect = 0.010
 Identities = 24/109 (22%), Positives = 49/109 (44%)
 Frame = +3

Query: 87  NNYGLSDAELNLIKTQASRRAEMRREFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQF 266
           + Y LSD E   +  +   +  +++E+L++  +P     + G   D A+ R+ S  +TQ 
Sbjct: 42  HEYNLSDEEKKAVLWRYRVKEILKKEYLRREYDPHSFKYKEGVTMDPAMFRWYSADMTQA 101

Query: 267 EYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRSGELRYKDR 413
           E+F    RT       +    + +  L++    +  +    G+L + DR
Sbjct: 102 EFFRFTPRTVFLYVGTVFALFYIYTRLMFVPMDKSNEACLDGKLLWWDR 150


>UniRef50_A5ZRN4 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 281

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 21/84 (25%), Positives = 39/84 (46%)
 Frame = +3

Query: 90  NYGLSDAELNLIKTQASRRAEMRREFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFE 269
           +YG +  ++   K + +  A+ +R+  K+R    KN   A  +       FL+    +  
Sbjct: 8   DYGNTITKIGRKKNKKNETAKKKRKIKKERKCSLKNRILASSMVRRISNLFLNTSSEKVS 67

Query: 270 YFTVNKRTSLFGFFVIVVPMFTFG 341
           +  +NK+ SL     +V+PMF  G
Sbjct: 68  FCALNKKASLALETALVLPMFLLG 91


>UniRef50_A5EWY5 Cluster: Putative uncharacterized protein; n=1;
           Dichelobacter nodosus VCS1703A|Rep: Putative
           uncharacterized protein - Dichelobacter nodosus (strain
           VCS1703A)
          Length = 483

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +3

Query: 225 TALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRSG 392
           T+ Q   S    +F+ F+ +KR +L G +   + + TFG L W+E+T  +   R G
Sbjct: 222 TSQQEPRSANGVEFD-FSADKRWNLRGNYFAALHLSTFGKLYWDEKTSNDLSSRIG 276


>UniRef50_Q54CX6 Cluster: 3-hydroxyisobutyrate dehydrogenase; n=3;
           cellular organisms|Rep: 3-hydroxyisobutyrate
           dehydrogenase - Dictyostelium discoideum AX4
          Length = 321

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -1

Query: 334 VNMGTTITKNPNKLVRLFTVKYSNCVTFMDRNLCNAVSKT*PASEAFFQGF 182
           +N+G     +P KL  +F    + C T    N C  V +T PAS  +  GF
Sbjct: 210 MNLGVKQGMDPKKLAGIFNTSSARCWTSELYNPCPGVIETSPASRGYTGGF 260


>UniRef50_UPI0000E45D13 Cluster: PREDICTED: similar to Y-linked zinc
           finger protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Y-linked zinc finger protein -
           Strongylocentrotus purpuratus
          Length = 1049

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -3

Query: 407 FVTELSTANLLFTLRSLVPYQGTKCKHGYNNNKKSKQTSSLVYGKIFKLCYFHGQKP 237
           F+  L T +L+ TL  ++P +  K KHG   NK S             +C + G+KP
Sbjct: 489 FIAYLVTCHLIHTLYFIIPQEHIKHKHGLLLNKDSYGRPKPTPTYACTVCDYVGRKP 545


>UniRef50_Q22A79 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1157

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 341  TKCKHGYNNNKKSKQTSSLVYGKIFKLCYFHGQ-KPLQCCVENITSLRSV 195
            T C+ GY  +  ++Q   L+ GK  + CYF  Q   +QC   N  +L ++
Sbjct: 922  TSCQSGYFLDANTQQCVKLICGKYCQSCYFDQQNNKIQCSYCNTDALSNL 971


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,681,541
Number of Sequences: 1657284
Number of extensions: 8649611
Number of successful extensions: 23327
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23323
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)