Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10i15f
(587 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY038990-1|AAK83467.1| 350|Homo sapiens ER-localized type I tra... 53 7e-07
BC084541-1|AAH84541.1| 350|Homo sapiens ATPase, H+ transporting... 52 2e-06
AK075382-1|BAC11582.1| 350|Homo sapiens protein ( Homo sapiens ... 52 2e-06
AF291814-1|AAM47531.1| 350|Homo sapiens renin receptor protein. 52 2e-06
AF248966-1|AAG44564.1| 350|Homo sapiens HT028 protein. 52 2e-06
AF109363-1|AAQ13511.1| 155|Homo sapiens MSTP009 protein. 52 2e-06
AY429341-1|AAR06910.1| 338|Homo sapiens embryonic liver differe... 46 1e-04
BC131802-1|AAI31803.1| 1872|Homo sapiens KIAA0564 protein protein. 32 1.3
BC053674-1|AAH53674.2| 1039|Homo sapiens KIAA0564 protein protein. 32 1.3
BC042924-1|AAH42924.2| 256|Homo sapiens KIAA0564 protein protein. 32 1.3
AL442203-3|CAH70373.1| 1039|Homo sapiens protein ( KIAA0564 and ... 32 1.3
AL354833-3|CAI39586.1| 1429|Homo sapiens protein ( Human DNA seq... 32 1.3
AL163544-2|CAI40170.1| 1039|Homo sapiens protein ( Human DNA seq... 32 1.3
AL163544-1|CAI40169.1| 1429|Homo sapiens protein ( Human DNA seq... 32 1.3
AL161417-2|CAI39491.1| 1039|Homo sapiens protein ( Human DNA seq... 32 1.3
AL161417-1|CAI39490.1| 1429|Homo sapiens protein ( Human DNA seq... 32 1.3
AL160252-1|CAI40564.1| 1429|Homo sapiens protein ( Human DNA seq... 32 1.3
AB011136-1|BAA25490.1| 1441|Homo sapiens KIAA0564 protein protein. 32 1.3
>AY038990-1|AAK83467.1| 350|Homo sapiens ER-localized type I
transmembrane adaptor precursor protein.
Length = 350
Score = 53.2 bits (122), Expect = 7e-07
Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Frame = +2
Query: 38 VSVWVFLISSIIGINASGELSILHSPESLSF-SGSSKTFESLLKEIFSASLGLSVEENSE 214
++V+V L++ + G+ E SIL SP S+ F +G+ + ++ + S+G SV+E+
Sbjct: 1 MAVFVVLLALVAGV-LGNEFSILKSPGSVVFRNGNWPIPGERIPDVAALSMGFSVKEDLS 59
Query: 215 WNGLLITDPFNTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQR 394
W GL + + F+ P A V V + G++ L YPL + P + D + + I+
Sbjct: 60 WPGLAVGNLFHRPRATVMVMVKGVNKLALPPG-SVISYPL--ENAVPFSLDSVANSIHSL 116
Query: 395 FTNGGNKLVNINLSDSDQLLSY--SNVLGDLDIPKVKKQSLQHLKSSVEEDFQFLSEL 562
F+ ++ + S+ + + ++V DL + +L+H+++ + ++ LS L
Sbjct: 117 FSEETPVVLQLAPSEERVYMVWKANSVFEDLSV------TLRHVRNRLFQENSVLSSL 168
>BC084541-1|AAH84541.1| 350|Homo sapiens ATPase, H+ transporting,
lysosomal accessory protein 2 protein.
Length = 350
Score = 51.6 bits (118), Expect = 2e-06
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +2
Query: 38 VSVWVFLISSIIGINASGELSILHSPESLSF-SGSSKTFESLLKEIFSASLGLSVEENSE 214
++V+V L++ + G+ E SIL SP S+ F +G+ + ++ + S+G SV+E+
Sbjct: 1 MAVFVVLLALVAGV-LGNEFSILKSPGSVVFRNGNWPIPGERIPDVAALSMGFSVKEDLS 59
Query: 215 WNGLLITDPFNTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQR 394
W GL + + F+ P A V V + G++ L YPL + P + D + + I+
Sbjct: 60 WPGLAVGNLFHRPRATVMVMVKGVNKLALPPG-SVISYPL--ENAVPFSLDSVANSIHSL 116
Query: 395 FT 400
F+
Sbjct: 117 FS 118
>AK075382-1|BAC11582.1| 350|Homo sapiens protein ( Homo sapiens
cDNA PSEC0072 fis, clone NT2RP2002429, highly similar to
ATPase, H+ transporting, lysosomal accessory protein 2.
).
Length = 350
Score = 51.6 bits (118), Expect = 2e-06
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +2
Query: 38 VSVWVFLISSIIGINASGELSILHSPESLSF-SGSSKTFESLLKEIFSASLGLSVEENSE 214
++V+V L++ + G+ E SIL SP S+ F +G+ + ++ + S+G SV+E+
Sbjct: 1 MAVFVVLLALVAGV-LGNEFSILKSPGSVVFRNGNWPIPGERIPDVAALSMGFSVKEDLS 59
Query: 215 WNGLLITDPFNTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQR 394
W GL + + F+ P A V V + G++ L YPL + P + D + + I+
Sbjct: 60 WPGLAVGNLFHRPRATVMVMVKGVNKLALPPG-SVISYPL--ENAVPFSLDSVANSIHSL 116
Query: 395 FT 400
F+
Sbjct: 117 FS 118
>AF291814-1|AAM47531.1| 350|Homo sapiens renin receptor protein.
Length = 350
Score = 51.6 bits (118), Expect = 2e-06
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +2
Query: 38 VSVWVFLISSIIGINASGELSILHSPESLSF-SGSSKTFESLLKEIFSASLGLSVEENSE 214
++V+V L++ + G+ E SIL SP S+ F +G+ + ++ + S+G SV+E+
Sbjct: 1 MAVFVVLLALVAGV-LGNEFSILKSPGSVVFRNGNWPIPGERIPDVAALSMGFSVKEDLS 59
Query: 215 WNGLLITDPFNTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQR 394
W GL + + F+ P A V V + G++ L YPL + P + D + + I+
Sbjct: 60 WPGLAVGNLFHRPRATVMVMVKGVNKLALPPG-SVISYPL--ENAVPFSLDSVANSIHSL 116
Query: 395 FT 400
F+
Sbjct: 117 FS 118
>AF248966-1|AAG44564.1| 350|Homo sapiens HT028 protein.
Length = 350
Score = 51.6 bits (118), Expect = 2e-06
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +2
Query: 38 VSVWVFLISSIIGINASGELSILHSPESLSF-SGSSKTFESLLKEIFSASLGLSVEENSE 214
++V+V L++ + G+ E SIL SP S+ F +G+ + ++ + S+G SV+E+
Sbjct: 1 MAVFVVLLALVAGV-LGNEFSILKSPGSVVFRNGNWPIPGERIPDVAALSMGFSVKEDLS 59
Query: 215 WNGLLITDPFNTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQR 394
W GL + + F+ P A V V + G++ L YPL + P + D + + I+
Sbjct: 60 WPGLAVGNLFHRPRATVMVMVKGVNKLALPPG-SVISYPL--ENAVPFSLDSVANSIHSL 116
Query: 395 FT 400
F+
Sbjct: 117 FS 118
>AF109363-1|AAQ13511.1| 155|Homo sapiens MSTP009 protein.
Length = 155
Score = 51.6 bits (118), Expect = 2e-06
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +2
Query: 38 VSVWVFLISSIIGINASGELSILHSPESLSF-SGSSKTFESLLKEIFSASLGLSVEENSE 214
++V+V L++ + G+ E SIL SP S+ F +G+ + ++ + S+G SV+E+
Sbjct: 1 MAVFVVLLALVAGV-LGNEFSILKSPGSVVFRNGNWPIPGERIPDVAALSMGFSVKEDLS 59
Query: 215 WNGLLITDPFNTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQR 394
W GL + + F+ P A V V + G++ L YPL + P + D + + I+
Sbjct: 60 WPGLAVGNLFHRPRATVMVMVKGVNKLALPPG-SVISYPL--ENAVPFSLDSVANSIHSL 116
Query: 395 FT 400
F+
Sbjct: 117 FS 118
>AY429341-1|AAR06910.1| 338|Homo sapiens embryonic liver
differentiation factor 10 protein.
Length = 338
Score = 46.0 bits (104), Expect = 1e-04
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 92 ELSILHSPESLSF-SGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPFNTPEAVVE 268
E SIL SP S+ F +G+ + ++ + S+G SV+E+ W GL + + F+ P A V
Sbjct: 6 EFSILKSPGSVVFRNGNWPIPGERIPDVAALSMGFSVKEDLSWPGLAVGNLFHRPRATVM 65
Query: 269 VYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFT 400
V + G++ L YPL + P + D + + I+ F+
Sbjct: 66 VMVKGVNKLALPPG-SVISYPL--ENAVPFSLDSVANSIHSLFS 106
>BC131802-1|AAI31803.1| 1872|Homo sapiens KIAA0564 protein protein.
Length = 1872
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 856 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 912
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 913 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 966
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 967 RNVFDFD---SYNNDMREILINTLHKYGI 992
>BC053674-1|AAH53674.2| 1039|Homo sapiens KIAA0564 protein protein.
Length = 1039
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 889 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 945
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 946 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 999
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 1000 RNVFDFD---SYNNDMREILINTLHKYGI 1025
>BC042924-1|AAH42924.2| 256|Homo sapiens KIAA0564 protein protein.
Length = 256
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 106 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 162
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 163 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 216
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 217 RNVFDFD---SYNNDMREILINTLHKYGI 242
>AL442203-3|CAH70373.1| 1039|Homo sapiens protein ( KIAA0564 and
FLJ21779) possible).).
Length = 1039
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 889 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 945
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 946 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 999
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 1000 RNVFDFD---SYNNDMREILINTLHKYGI 1025
>AL354833-3|CAI39586.1| 1429|Homo sapiens protein ( Human DNA
sequence from clone RP11-157L14 on chromosome 13
Contains an olfactory receptor pseudogene, a novel gene
(RGC32), the 3' end ).
Length = 1429
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 413 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 469
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 470 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 523
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 524 RNVFDFD---SYNNDMREILINTLHKYGI 549
>AL163544-2|CAI40170.1| 1039|Homo sapiens protein ( Human DNA sequence
from clone RP11-322A14 on chromosome 13. ).
Length = 1039
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 889 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 945
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 946 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 999
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 1000 RNVFDFD---SYNNDMREILINTLHKYGI 1025
>AL163544-1|CAI40169.1| 1429|Homo sapiens protein ( Human DNA
sequence from clone RP11-322A14 on chromosome 13. ).
Length = 1429
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 413 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 469
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 470 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 523
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 524 RNVFDFD---SYNNDMREILINTLHKYGI 549
>AL161417-2|CAI39491.1| 1039|Homo sapiens protein ( Human DNA sequence
from clone RP11-125A7 on chromosome 13. ).
Length = 1039
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 889 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 945
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 946 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 999
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 1000 RNVFDFD---SYNNDMREILINTLHKYGI 1025
>AL161417-1|CAI39490.1| 1429|Homo sapiens protein ( Human DNA
sequence from clone RP11-125A7 on chromosome 13. ).
Length = 1429
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 413 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 469
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 470 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 523
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 524 RNVFDFD---SYNNDMREILINTLHKYGI 549
>AL160252-1|CAI40564.1| 1429|Homo sapiens protein ( Human DNA
sequence from clone RP11-395K16 on chromosome 13. ).
Length = 1429
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 413 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 469
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 470 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 523
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 524 RNVFDFD---SYNNDMREILINTLHKYGI 549
>AB011136-1|BAA25490.1| 1441|Homo sapiens KIAA0564 protein protein.
Length = 1441
Score = 32.3 bits (70), Expect = 1.3
Identities = 37/149 (24%), Positives = 65/149 (43%)
Frame = +2
Query: 65 SIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPF 244
+++ I+ + +L + F G+ F L +IFS + + +SE L P
Sbjct: 425 NVVVIHPDFRMIVLANRPGFPFLGND--FFGTLGDIFSCHAVDNPKPHSELEMLRQYGP- 481
Query: 245 NTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVN 424
N PE +++ ++ L S AD YP E +++KH Q+F G V
Sbjct: 482 NVPEPILQKLVAAFGELRSLADQGIINYPYSTRE----VVNIVKHL--QKFPTEGLSSVV 535
Query: 425 INLSDSDQLLSYSNVLGDLDIPKVKKQSL 511
N+ D D SY+N + ++ I + K +
Sbjct: 536 RNVFDFD---SYNNDMREILINTLHKYGI 561
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,925,835
Number of Sequences: 237096
Number of extensions: 1484540
Number of successful extensions: 3893
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3893
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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