Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10i15f
(587 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.7
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 3.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 3.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 3.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 5.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.1
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 6.8
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 21 9.0
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 9.0
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 237 IRSTLLKQLSKFTLVAYPVWGVPL 308
+RS + +LS LV +PVW V L
Sbjct: 889 LRSLEILRLSGNRLVTFPVWQVTL 912
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 314 KSKKYPLVVDEYEPDTF 364
++K YPL VD++ TF
Sbjct: 66 RTKNYPLDVDQWHNKTF 82
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 167 LLKDSRKFYWNQRNLTTQD 111
LLKD K +W +R L D
Sbjct: 179 LLKDPVKEFWERRTLQISD 197
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 167 LLKDSRKFYWNQRNLTTQD 111
LLKD K +W +R L D
Sbjct: 232 LLKDPVKEFWERRTLQISD 250
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -3
Query: 213 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 40
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -3
Query: 213 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 40
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -3
Query: 213 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 40
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -3
Query: 213 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 40
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -3
Query: 213 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 40
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -3
Query: 213 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 40
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -3
Query: 213 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 40
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = -3
Query: 213 SEFSSTERPREAENISFKRLSKVLLEPEKLNDSGLWRMLSSPEALIPIIEEIKKTHTD 40
S+ S + P + SK + EKL S + PE E++K D
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKIKVD 131
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +2
Query: 347 YEPDTFDVLKHRINQRFTNGGNKLVNINLSDSDQLLSYSNVL 472
+E D+F V KH R + G N+ + + + S V+
Sbjct: 707 WEGDSFKVSKHEEVSRTSTAGQFPTNVATTVTSMSIDQSTVI 748
Score = 21.8 bits (44), Expect = 5.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 297 PRLDMPLM*TSTTASGVLNGSVINNP 220
P + +P+ STT +GV+ VI P
Sbjct: 827 PYMFLPVSYMSTTMAGVIYPPVIGTP 852
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 23 MAATMVSVWVFLISSIIG 76
M + +W+F I+SI+G
Sbjct: 483 MVLDRLFLWIFTIASIVG 500
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 290 SLGSSADFKSKKYPLVVDEYEP 355
S+ + ++ KYP+VV Y P
Sbjct: 5 SVEAVMSLRALKYPMVVHVYHP 26
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 290 SLGSSADFKSKKYPLVVDEYEP 355
S+ + ++ KYP+VV Y P
Sbjct: 5 SVEAVMSLRALKYPMVVHVYHP 26
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,644
Number of Sequences: 438
Number of extensions: 3002
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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