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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i11f
         (643 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729...    31   1.0  
02_03_0145 - 15715181-15715834,15716049-15716271,15717318-15718777     31   1.0  
08_01_0705 + 6231220-6231390,6231900-6231954,6232043-6232194,623...    30   1.4  
09_02_0406 - 8629287-8629304,8629384-8629865,8629977-8630291,863...    29   4.1  
11_06_0076 - 19830482-19831258,19837352-19837613,19838073-19838485     28   5.5  
10_05_0040 - 8463585-8464396,8464664-8465273,8465708-8466169           28   5.5  
02_01_0417 - 3048519-3048710,3048903-3050600,3050622-3050909,305...    28   7.2  
12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634...    27   9.6  
07_01_0599 - 4457770-4458449,4458575-4458944                           27   9.6  
06_01_1112 - 9157776-9158149,9158248-9161158                           27   9.6  
05_06_0186 - 26207298-26208548,26208743-26208853,26209286-262095...    27   9.6  

>02_05_0226 +
           26971851-26972034,26972734-26972834,26972876-26972978,
           26973335-26973477,26973525-26973605,26973929-26974015,
           26974097-26974239,26974746-26974896,26974973-26975095,
           26975362-26975445,26975531-26975718,26976726-26976900,
           26977008-26977129,26977231-26977310,26977532-26977590,
           26977921-26978075,26978680-26978858,26980050-26980162,
           26980243-26980413,26980552-26980680,26980756-26980856,
           26980942-26981059,26981739-26981818,26983230-26983302,
           26983865-26983950,26984025-26984076,26984221-26984352,
           26984560-26984628,26984912-26985004,26985806-26985901,
           26986710-26986808,26986894-26986986,26987459-26987608,
           26988391-26988549
          Length = 1323

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 176 GGAIAPINYHPYLAGLLIDINELQSPAACGGSIL 277
           GGA+AP+      + +L++   + SP+ACGG  L
Sbjct: 482 GGAVAPVPTWTLQSRMLMNGTSMSSPSACGGVAL 515


>02_03_0145 - 15715181-15715834,15716049-15716271,15717318-15718777
          Length = 778

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
 Frame = +1

Query: 271 DPYPCQHLNCSSLLVRWKKSCSTFHCRTGN-----PIPVPWWLKDSSV 399
           +P          L  +W   C   H R+ N     P P+PWW + SSV
Sbjct: 555 EPQTSHKAELMELRRKWGILCQRVHSRSHNDQASVPSPMPWWCRPSSV 602


>08_01_0705 +
           6231220-6231390,6231900-6231954,6232043-6232194,
           6232252-6232335,6232614-6232797,6232885-6232988,
           6233109-6233183,6233366-6233405,6233495-6233577,
           6233687-6233764,6233868-6234011,6234093-6234160,
           6234831-6234945,6235045-6235201,6235311-6235408
          Length = 535

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
 Frame = +2

Query: 74  ANEEFVGWLEKVGIKTAAKIKQAEQHQ----IFMQRIVGGAIAPINYHPYLAGLLIDINE 241
           A+  F+G+    G+  AAK+ +    Q    +F+QR  GG ++ + Y    A +  +IN+
Sbjct: 320 ADPTFLGYFIDKGVSAAAKVVRKAYPQEKVGVFVQRGRGGPLSVVEYSEMDAAMTTEINQ 379


>09_02_0406 -
           8629287-8629304,8629384-8629865,8629977-8630291,
           8630381-8630576
          Length = 336

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 93  DGSKKLALKRLQRLSKRNNTKYLCSASLGELLRQSITIHIWQV 221
           DG+ K  L  L+++++R +T+ LC      LLR S   H+W V
Sbjct: 4   DGTLKSRLILLRKVARRLSTRDLCEEFC--LLRISPLAHVWDV 44


>11_06_0076 - 19830482-19831258,19837352-19837613,19838073-19838485
          Length = 483

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 326 FFHRTSNELQLRCWQG*GSIRRTRPVI 246
           FF RT NEL +   QG  SIR T  V+
Sbjct: 169 FFWRTENELDIGSGQGTSSIRSTSSVL 195


>10_05_0040 - 8463585-8464396,8464664-8465273,8465708-8466169
          Length = 627

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 177 PTMRCINIWCCSACLIFAAVLM 112
           P +R    WC + CL+F A +M
Sbjct: 600 PVLRYFKFWCSTPCLVFEASVM 621


>02_01_0417 -
           3048519-3048710,3048903-3050600,3050622-3050909,
           3052308-3052377,3052417-3052668,3053235-3055297
          Length = 1520

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 133 NLCSRFNANFFEPSYKFFVGATFTTCVGHKAQNEKH 26
           N  SRF  NFF+P++   +  TF + V    + E+H
Sbjct: 9   NKTSRFRINFFDPAFVLLL--TFISPVNSCTEQERH 42


>12_02_0318 -
           17457182-17462232,17462745-17462955,17463356-17463403,
           17466161-17466346
          Length = 1831

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 557 RPTCLPCQCLEANQWLMELAVPHG 486
           +P C   + +E ++W++ LA PHG
Sbjct: 313 KPECRDKKRMEVDKWVITLAFPHG 336


>07_01_0599 - 4457770-4458449,4458575-4458944
          Length = 349

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -3

Query: 563 LQRPTCLPCQCLEANQWLMELAVPHG*ILYDGVST 459
           L R  C+P   LE  QW M L  P   IL+D   T
Sbjct: 192 LIRTGCMPSFDLETEQWSMTLQGPTKTILHDANGT 226


>06_01_1112 - 9157776-9158149,9158248-9161158
          Length = 1094

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +2

Query: 131 IKQAEQHQIFMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAH 307
           IKQ     I+M R VG     I +   L  L + +NE         S L+   IL  +H
Sbjct: 611 IKQINYMDIYMNRFVGSLPDSIGHLQMLGYLNLSVNEFHDSIPDSFSNLSGLQILDISH 669


>05_06_0186 -
           26207298-26208548,26208743-26208853,26209286-26209507,
           26209623-26209658
          Length = 539

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 247 ITGRVRRIDPYPCQHLNCSSLLVRWKKSCSTFHC 348
           + G V +ID   C  L C S+  + K+   +F C
Sbjct: 80  LAGLVSQIDELVCAALECQSVSAKGKQEIESFSC 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,450,509
Number of Sequences: 37544
Number of extensions: 444698
Number of successful extensions: 1063
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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