BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10i11f (643 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729... 31 1.0 02_03_0145 - 15715181-15715834,15716049-15716271,15717318-15718777 31 1.0 08_01_0705 + 6231220-6231390,6231900-6231954,6232043-6232194,623... 30 1.4 09_02_0406 - 8629287-8629304,8629384-8629865,8629977-8630291,863... 29 4.1 11_06_0076 - 19830482-19831258,19837352-19837613,19838073-19838485 28 5.5 10_05_0040 - 8463585-8464396,8464664-8465273,8465708-8466169 28 5.5 02_01_0417 - 3048519-3048710,3048903-3050600,3050622-3050909,305... 28 7.2 12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634... 27 9.6 07_01_0599 - 4457770-4458449,4458575-4458944 27 9.6 06_01_1112 - 9157776-9158149,9158248-9161158 27 9.6 05_06_0186 - 26207298-26208548,26208743-26208853,26209286-262095... 27 9.6 >02_05_0226 + 26971851-26972034,26972734-26972834,26972876-26972978, 26973335-26973477,26973525-26973605,26973929-26974015, 26974097-26974239,26974746-26974896,26974973-26975095, 26975362-26975445,26975531-26975718,26976726-26976900, 26977008-26977129,26977231-26977310,26977532-26977590, 26977921-26978075,26978680-26978858,26980050-26980162, 26980243-26980413,26980552-26980680,26980756-26980856, 26980942-26981059,26981739-26981818,26983230-26983302, 26983865-26983950,26984025-26984076,26984221-26984352, 26984560-26984628,26984912-26985004,26985806-26985901, 26986710-26986808,26986894-26986986,26987459-26987608, 26988391-26988549 Length = 1323 Score = 30.7 bits (66), Expect = 1.0 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +2 Query: 176 GGAIAPINYHPYLAGLLIDINELQSPAACGGSIL 277 GGA+AP+ + +L++ + SP+ACGG L Sbjct: 482 GGAVAPVPTWTLQSRMLMNGTSMSSPSACGGVAL 515 >02_03_0145 - 15715181-15715834,15716049-15716271,15717318-15718777 Length = 778 Score = 30.7 bits (66), Expect = 1.0 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%) Frame = +1 Query: 271 DPYPCQHLNCSSLLVRWKKSCSTFHCRTGN-----PIPVPWWLKDSSV 399 +P L +W C H R+ N P P+PWW + SSV Sbjct: 555 EPQTSHKAELMELRRKWGILCQRVHSRSHNDQASVPSPMPWWCRPSSV 602 >08_01_0705 + 6231220-6231390,6231900-6231954,6232043-6232194, 6232252-6232335,6232614-6232797,6232885-6232988, 6233109-6233183,6233366-6233405,6233495-6233577, 6233687-6233764,6233868-6234011,6234093-6234160, 6234831-6234945,6235045-6235201,6235311-6235408 Length = 535 Score = 30.3 bits (65), Expect = 1.4 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Frame = +2 Query: 74 ANEEFVGWLEKVGIKTAAKIKQAEQHQ----IFMQRIVGGAIAPINYHPYLAGLLIDINE 241 A+ F+G+ G+ AAK+ + Q +F+QR GG ++ + Y A + +IN+ Sbjct: 320 ADPTFLGYFIDKGVSAAAKVVRKAYPQEKVGVFVQRGRGGPLSVVEYSEMDAAMTTEINQ 379 >09_02_0406 - 8629287-8629304,8629384-8629865,8629977-8630291, 8630381-8630576 Length = 336 Score = 28.7 bits (61), Expect = 4.1 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +3 Query: 93 DGSKKLALKRLQRLSKRNNTKYLCSASLGELLRQSITIHIWQV 221 DG+ K L L+++++R +T+ LC LLR S H+W V Sbjct: 4 DGTLKSRLILLRKVARRLSTRDLCEEFC--LLRISPLAHVWDV 44 >11_06_0076 - 19830482-19831258,19837352-19837613,19838073-19838485 Length = 483 Score = 28.3 bits (60), Expect = 5.5 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -3 Query: 326 FFHRTSNELQLRCWQG*GSIRRTRPVI 246 FF RT NEL + QG SIR T V+ Sbjct: 169 FFWRTENELDIGSGQGTSSIRSTSSVL 195 >10_05_0040 - 8463585-8464396,8464664-8465273,8465708-8466169 Length = 627 Score = 28.3 bits (60), Expect = 5.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -2 Query: 177 PTMRCINIWCCSACLIFAAVLM 112 P +R WC + CL+F A +M Sbjct: 600 PVLRYFKFWCSTPCLVFEASVM 621 >02_01_0417 - 3048519-3048710,3048903-3050600,3050622-3050909, 3052308-3052377,3052417-3052668,3053235-3055297 Length = 1520 Score = 27.9 bits (59), Expect = 7.2 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -1 Query: 133 NLCSRFNANFFEPSYKFFVGATFTTCVGHKAQNEKH 26 N SRF NFF+P++ + TF + V + E+H Sbjct: 9 NKTSRFRINFFDPAFVLLL--TFISPVNSCTEQERH 42 >12_02_0318 - 17457182-17462232,17462745-17462955,17463356-17463403, 17466161-17466346 Length = 1831 Score = 27.5 bits (58), Expect = 9.6 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -3 Query: 557 RPTCLPCQCLEANQWLMELAVPHG 486 +P C + +E ++W++ LA PHG Sbjct: 313 KPECRDKKRMEVDKWVITLAFPHG 336 >07_01_0599 - 4457770-4458449,4458575-4458944 Length = 349 Score = 27.5 bits (58), Expect = 9.6 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -3 Query: 563 LQRPTCLPCQCLEANQWLMELAVPHG*ILYDGVST 459 L R C+P LE QW M L P IL+D T Sbjct: 192 LIRTGCMPSFDLETEQWSMTLQGPTKTILHDANGT 226 >06_01_1112 - 9157776-9158149,9158248-9161158 Length = 1094 Score = 27.5 bits (58), Expect = 9.6 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = +2 Query: 131 IKQAEQHQIFMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAH 307 IKQ I+M R VG I + L L + +NE S L+ IL +H Sbjct: 611 IKQINYMDIYMNRFVGSLPDSIGHLQMLGYLNLSVNEFHDSIPDSFSNLSGLQILDISH 669 >05_06_0186 - 26207298-26208548,26208743-26208853,26209286-26209507, 26209623-26209658 Length = 539 Score = 27.5 bits (58), Expect = 9.6 Identities = 11/34 (32%), Positives = 17/34 (50%) Frame = +1 Query: 247 ITGRVRRIDPYPCQHLNCSSLLVRWKKSCSTFHC 348 + G V +ID C L C S+ + K+ +F C Sbjct: 80 LAGLVSQIDELVCAALECQSVSAKGKQEIESFSC 113 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,450,509 Number of Sequences: 37544 Number of extensions: 444698 Number of successful extensions: 1063 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1035 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1063 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1584867848 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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