Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i09r
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.0  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 479  MSFSEAPEILFWKD 520
            + F  + EILFWKD
Sbjct: 1225 VEFLSSTEILFWKD 1238


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 479  MSFSEAPEILFWKD 520
            + F  + EILFWKD
Sbjct: 1225 VEFLSSTEILFWKD 1238


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 479  MSFSEAPEILFWKD 520
            + F  + EILFWKD
Sbjct: 1225 VEFLSSTEILFWKD 1238


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 479  MSFSEAPEILFWKD 520
            + F  + EILFWKD
Sbjct: 1225 VEFLSSTEILFWKD 1238


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 192 VVISLYCKMKEINIGLNLRSTLEFLRKYYTDNTLKLV 302
           ++ISL C +  +   L L + LE    Y+T   L ++
Sbjct: 130 IIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHII 166


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 192 VVISLYCKMKEINIGLNLRSTLEFLRKYYTDNTLKLV 302
           ++ISL C +  +   L L + LE    Y+T   L ++
Sbjct: 130 IIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHII 166


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 192 VVISLYCKMKEINIGLNLRSTLEFLRKYYTDNTLKLV 302
           ++ISL C +  +   L L + LE    Y+T   L ++
Sbjct: 130 IIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHII 166


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 599 ICWNRSKSLSSGGSVA 552
           + WN   SLS GG +A
Sbjct: 376 LSWNSISSLSHGGQLA 391


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,153
Number of Sequences: 336
Number of extensions: 3838
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)