Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i08f
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    24   0.93 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    24   0.93 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   5.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.5  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 253 LPASAKSRVISPSLISDPWIFKSFNS*GLFKLIQLWD 143
           LP      + +  +   PWI    NS GL+ + +++D
Sbjct: 297 LPTHPYQMIKNQQVYDVPWIVSFTNSEGLYAINEIYD 333


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 253 LPASAKSRVISPSLISDPWIFKSFNS*GLFKLIQLWD 143
           LP      + +  +   PWI    NS GL+ + +++D
Sbjct: 297 LPTHPYQMIKNQQVYDVPWIVSFTNSEGLYAINEIYD 333


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 134 VKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQRARKFFFRGF 283
           VK   + DE +   + K LKD    +E  R  PG GT++Q        GF
Sbjct: 80  VKKEDESDEEKPTTSFK-LKDSSSDSEDERPRPGGGTKYQTFSNLNISGF 128


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 149 QLDELEKALAVKGLKDPWIRNE 214
           QLDELEKA       D + R E
Sbjct: 231 QLDELEKAFERTQYPDIYTREE 252


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 263 KFFFRGFPIGLGLTVI 310
           + + RGFP GLG  V+
Sbjct: 453 EIYDRGFPGGLGRAVV 468


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,305
Number of Sequences: 336
Number of extensions: 2861
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)