Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i06f
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   1.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   3.7  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   4.9  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 219 LAGCQREVHGARR*TRQGRPS-PGSRGVPVRDC 314
           L G + +V    R  R G P  PG +G P RDC
Sbjct: 762 LQGLRGDVGPEGRPGRDGAPGLPGPKGEPGRDC 794


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 484  FLNLKPLSHKQMHMCFTGGQMRFSVPK 404
            F    P S KQ  MCF+      ++PK
Sbjct: 1441 FFEFIPFSGKQFQMCFSATNQYPNMPK 1467


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 251 PPVDASGPSEPG 286
           PP+ A GPS PG
Sbjct: 315 PPLPADGPSNPG 326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,768
Number of Sequences: 2352
Number of extensions: 9411
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)