Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i05r
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    25   0.49 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   3.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   3.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   3.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.9  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -3

Query: 566 PAPSAVSACEHAN*HRNRKASAPRTPRHSISLISQ*GGVIPVGYKPSRSLSD 411
           P+P++ S C       +   +AP     S+  IS  GG +P    P +  SD
Sbjct: 172 PSPASDSECFDRRKFISALVNAPSVSPASLPSISPSGGFLPKWLPPLQGFSD 223


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
 Frame = -2

Query: 192 FFFSIFFYCKATGTI--DYDVAMY 127
           FF S FFY   TG I   YD   Y
Sbjct: 241 FFISTFFYFFTTGNIIATYDKQFY 264


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
 Frame = -2

Query: 192 FFFSIFFYCKATGTI--DYDVAMY 127
           FF S FFY   TG I   YD   Y
Sbjct: 237 FFISTFFYFFTTGNIIATYDKQFY 260


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 18/75 (24%), Positives = 29/75 (38%)
 Frame = -2

Query: 354 VLCSE*GRALGATARPNVAVSPHWPNADRSSRLHFINYYVILIQPNKGTKNI*AFFFSIF 175
           V+ +  G   G   R NV ++     A     L   N  V+ ++ N  T     +FF   
Sbjct: 138 VMMASYGWPAGLNRRLNVLLAVFMSLALIEYILMQTNKLVLALECNNSTSEGFDYFFGKM 197

Query: 174 FYCKATGTIDYDVAM 130
            Y      +DY++ M
Sbjct: 198 SYSHIFSLMDYNIVM 212


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 18/75 (24%), Positives = 29/75 (38%)
 Frame = -2

Query: 354 VLCSE*GRALGATARPNVAVSPHWPNADRSSRLHFINYYVILIQPNKGTKNI*AFFFSIF 175
           V+ +  G   G   R NV ++     A     L   N  V+ ++ N  T     +FF   
Sbjct: 138 VMMASYGWPAGLNRRLNVLLAVFMSLALIEYILMQTNKLVLALECNNSTSEGFDYFFGKM 197

Query: 174 FYCKATGTIDYDVAM 130
            Y      +DY++ M
Sbjct: 198 SYSHIFSLMDYNIVM 212


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 18/75 (24%), Positives = 29/75 (38%)
 Frame = -2

Query: 354 VLCSE*GRALGATARPNVAVSPHWPNADRSSRLHFINYYVILIQPNKGTKNI*AFFFSIF 175
           V+ +  G   G   R NV ++     A     L   N  V+ ++ N  T     +FF   
Sbjct: 138 VMMASYGWPAGLNRRLNVLLAVFMSLALIEYILMQTNKLVLALECNNSTSEGFDYFFGKM 197

Query: 174 FYCKATGTIDYDVAM 130
            Y      +DY++ M
Sbjct: 198 SYSHIFSLMDYNIVM 212


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 315 ARPNVAVSPHWPNADRSS 262
           ARP V  +P W  A  SS
Sbjct: 45  ARPGVVTTPRWGCARASS 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,267
Number of Sequences: 336
Number of extensions: 3082
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)