Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i05r
         (742 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0085 + 14725531-14726622                                         30   1.7  
10_08_0410 - 17716370-17716743,17716839-17716939,17717104-177173...    30   2.2  
02_01_0444 + 3212646-3212686,3213093-3213225,3213467-3213570,321...    28   6.8  
08_01_0131 + 1050028-1050459,1051599-1051701,1052338-1052393,105...    28   9.0  
01_03_0130 + 12853325-12853948,12854657-12854822,12854907-128551...    28   9.0  

>10_08_0085 + 14725531-14726622
          Length = 363

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -2

Query: 288 HWPNADRSSRLHFINYYVILIQPNKGTKNI*AFF 187
           ++PNADR+    +I+ Y+ L + +  T+++ A F
Sbjct: 61  YYPNADRADSADYISMYLFLDEKSNATRSVKALF 94


>10_08_0410 -
           17716370-17716743,17716839-17716939,17717104-17717300,
           17717392-17717677,17717768-17718004,17718226-17718281,
           17720042-17721226
          Length = 811

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 622 HFRHHLHCPRLPGLSGPGVPRP 557
           H  HH H P LP L+ P  P P
Sbjct: 16  HHHHHAHLPALPHLAAPPPPPP 37


>02_01_0444 +
           3212646-3212686,3213093-3213225,3213467-3213570,
           3214360-3214504,3214592-3214732,3214835-3216298
          Length = 675

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -3

Query: 575 SRSPAPSAVSACEHAN*HRNRKASAPRTPRHSISLISQ*GGVIPVGYKPSRSLS 414
           SR+P P A    +      NR+ +    P  ++SL S  G +      P+RS+S
Sbjct: 592 SRTPRPRADQPADGVGERSNREVAPQHPPERTVSLPSDSGNLGVKPKAPARSIS 645


>08_01_0131 +
           1050028-1050459,1051599-1051701,1052338-1052393,
           1052517-1052693,1052820-1052933,1053057-1053386
          Length = 403

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 296 TATLGRAVAPSARPYSEHKTTDGVIEPERIVAPS 397
           TA  G AVA +A P   H  + GV+   R  +PS
Sbjct: 34  TAAAGAAVAAAATPRDAHAASGGVMGGRRSSSPS 67


>01_03_0130 +
           12853325-12853948,12854657-12854822,12854907-12855118,
           12855372-12855865,12856228-12856276,12856367-12856690
          Length = 622

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 631 QAPHFRHHLHCPRLPGLSGPGVPRPQQ 551
           + PH  HHLH  RLP L+     + QQ
Sbjct: 40  RCPHPHHHLHGRRLPFLASAASQQQQQ 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,077,354
Number of Sequences: 37544
Number of extensions: 332918
Number of successful extensions: 797
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)