Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i05r
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79694-8|CAB01965.1|  872|Caenorhabditis elegans Hypothetical pr...    59   4e-09
Z72506-9|CAA96622.1|  872|Caenorhabditis elegans Hypothetical pr...    59   4e-09
X08068-1|CAA30857.1|  882|Caenorhabditis elegans paramyosin prot...    58   9e-09
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p...    33   0.21 
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr...    33   0.21 
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.     33   0.21 
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    30   1.5  
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    30   1.5  

>Z79694-8|CAB01965.1|  872|Caenorhabditis elegans Hypothetical
           protein F07A5.7 protein.
          Length = 872

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = -2

Query: 741 EGMSQQSVTRVRRFQRELEAAEDRADVAESNLSLIRAKHRTFVTTSTVPGSQVYLVQE 568
           E ++ Q++ RVRR+Q ELE AE RAD AES+L LIRAKHR+ V T     S++++ ++
Sbjct: 814 ESVTMQNLQRVRRYQHELEDAEGRADQAESSLHLIRAKHRSSVVTGK-SSSKIFVTED 870


>Z72506-9|CAA96622.1|  872|Caenorhabditis elegans Hypothetical
           protein F07A5.7 protein.
          Length = 872

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = -2

Query: 741 EGMSQQSVTRVRRFQRELEAAEDRADVAESNLSLIRAKHRTFVTTSTVPGSQVYLVQE 568
           E ++ Q++ RVRR+Q ELE AE RAD AES+L LIRAKHR+ V T     S++++ ++
Sbjct: 814 ESVTMQNLQRVRRYQHELEDAEGRADQAESSLHLIRAKHRSSVVTGK-SSSKIFVTED 870


>X08068-1|CAA30857.1|  882|Caenorhabditis elegans paramyosin
           protein.
          Length = 882

 Score = 57.6 bits (133), Expect = 9e-09
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -2

Query: 741 EGMSQQSVTRVRRFQRELEAAEDRADVAESNLSLIRAKHRTFVTT 607
           E ++ Q++ RVRR+Q ELE AE RAD AES+L LIRAKHR+ V T
Sbjct: 830 ESVTMQNLQRVRRYQHELEDAEGRADQAESSLHLIRAKHRSSVVT 874


>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
            protein R06C7.10 protein.
          Length = 1938

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 15/38 (39%), Positives = 28/38 (73%)
 Frame = -2

Query: 741  EGMSQQSVTRVRRFQRELEAAEDRADVAESNLSLIRAK 628
            E ++ Q++++ R+ Q  LE AE+RA+VAE++L  +R +
Sbjct: 1893 EEVATQNLSKFRQIQLALENAEERAEVAENSLVRMRGQ 1930


>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
            R06C7.10 protein.
          Length = 1938

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 15/38 (39%), Positives = 28/38 (73%)
 Frame = -2

Query: 741  EGMSQQSVTRVRRFQRELEAAEDRADVAESNLSLIRAK 628
            E ++ Q++++ R+ Q  LE AE+RA+VAE++L  +R +
Sbjct: 1893 EEVATQNLSKFRQIQLALENAEERAEVAENSLVRMRGQ 1930


>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
          Length = 1938

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 15/38 (39%), Positives = 28/38 (73%)
 Frame = -2

Query: 741  EGMSQQSVTRVRRFQRELEAAEDRADVAESNLSLIRAK 628
            E ++ Q++++ R+ Q  LE AE+RA+VAE++L  +R +
Sbjct: 1893 EEVATQNLSKFRQIQLALENAEERAEVAENSLVRMRGQ 1930


>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
            K12F2.1 protein.
          Length = 1969

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -2

Query: 741  EGMSQQSVTRVRRFQRELEAAEDRADVAESNLSLIRAKHRTFVTTSTVPG 592
            E ++  ++ + +    + E AE+RAD+AE+ LS +R K R   + +   G
Sbjct: 1899 EEVAASNLNKYKVLTAQFEQAEERADIAENALSKMRNKIRASASMAPPDG 1948


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
            protein.
          Length = 1969

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -2

Query: 741  EGMSQQSVTRVRRFQRELEAAEDRADVAESNLSLIRAKHRTFVTTSTVPG 592
            E ++  ++ + +    + E AE+RAD+AE+ LS +R K R   + +   G
Sbjct: 1899 EEVAASNLNKYKVLTAQFEQAEERADIAENALSKMRNKIRASASMAPPDG 1948


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,113,136
Number of Sequences: 27780
Number of extensions: 282192
Number of successful extensions: 769
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)