Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10i05f
(531 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 35 0.002
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 29 0.13
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 28 0.17
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 28 0.22
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 27 0.52
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 26 0.91
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 25 1.6
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 24 2.8
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 24 3.7
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 24 3.7
AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein. 24 3.7
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 23 4.8
DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein. 23 8.4
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 23 8.4
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 34.7 bits (76), Expect = 0.002
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = +1
Query: 271 KQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEETVQLYEQTQRDLR 450
++K +LQ+E+ L ++++ + + + + + +LE YE+T++DL
Sbjct: 464 EEKEKLQTELIELKRAVDESKSALSIAESELKICQHDEVTERRKLESLRYSYEETEKDLE 523
Query: 451 NKQTELQRVSHELDKTREQ 507
K+ LQ + L TR +
Sbjct: 524 EKRARLQTLEEALPVTRTE 542
Score = 22.6 bits (46), Expect = 8.4
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 262 NVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEE 411
NV+K K ++ S + ++E A R+ QLE +++ LEE
Sbjct: 929 NVQKSKDKINSMED----EVEAAQSAIRKGNDERTQLEEEANKLREELEE 974
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 28.7 bits (61), Expect = 0.13
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +1
Query: 271 KQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEETVQLYEQTQRDLR 450
++ RL E + + + + +ELQ+R +L E K L+E + Y+QT+ ++
Sbjct: 619 QEHQRLVRECDKIRNQRGQIENSIKELQERCAELR----EQKRDLQEQLSKYQQTKMKVK 674
Query: 451 NKQTELQRVSHELDKTREQK 510
++ + + ++ L E+K
Sbjct: 675 RQEQKCKELTARLVNVDEEK 694
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 28.3 bits (60), Expect = 0.17
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +1
Query: 280 SRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEETVQLYEQ 432
SRL S+V+ +DL KA T R L+K ++ E KS T+QL EQ
Sbjct: 137 SRLNSDVQFRSLDLSKAKTTVRLLKKPPS----LDSEWKSS-TSTIQLIEQ 182
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 27.9 bits (59), Expect = 0.22
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 INNVEKQ-KSRLQSEVEV---LIIDLEKANGTARELQKRTEQLERVNIEIKSRLEETVQL 423
+N +K + RL SE+ + + +K E KR E+L + LEE ++
Sbjct: 406 VNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRI 465
Query: 424 YEQTQRDLRNKQTELQRVSHELDKTREQ 507
+ +D+ + + + ELD REQ
Sbjct: 466 KAELSQDVGTSKERIHELQSELDNVREQ 493
Score = 24.2 bits (50), Expect = 2.8
Identities = 18/88 (20%), Positives = 40/88 (45%)
Frame = +1
Query: 253 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEETVQLYEQ 432
++N +EK+K EVL ++ RE+ K+ +++ V E+ R ++ +
Sbjct: 258 ELNIIEKRKEEAD---EVLKEKKKEVGKMTREMAKKEQEIREVEAEMSKR----HPMFIK 310
Query: 433 TQRDLRNKQTELQRVSHELDKTREQKDA 516
+ + + Q +L L++ R +A
Sbjct: 311 AKEKVAHTQKKLDGALKTLEQARRADEA 338
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 26.6 bits (56), Expect = 0.52
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +1
Query: 397 SRLEETVQLYEQTQRDLRNKQTELQRVSHELDKTREQKDALARE 528
+R++ +Q E RD+ + +++++ +H + +EQ D L E
Sbjct: 680 NRIQAMLQEKEAELRDISAEVSKIEKTAHRFGQLKEQHDMLNYE 723
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 25.8 bits (54), Expect = 0.91
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 328 ANGTARELQKRTEQLERVNIEIKSRLEETVQLYEQTQRDLRNKQ-TELQRVSHELDKTRE 504
+ G R + + + I RLEE +QL + Q + N+Q E QR + E +
Sbjct: 67 STGEVRRMLADAKADNETTVGIVKRLEEQIQLL-RLQMEASNEQLKEAQREAREAREDAR 125
Query: 505 QKDALARE 528
++A RE
Sbjct: 126 VREAEHRE 133
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 25.0 bits (52), Expect = 1.6
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Frame = -2
Query: 509 FCSRVLSSSWETRWSS----VCLLRRSRWV 432
FC ++ + +W+ RWS +R ++WV
Sbjct: 318 FCEKLATEAWDLRWSEEQQVPYAVRNNQWV 347
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 24.2 bits (50), Expect = 2.8
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 373 ERVNIEI-KSRLEETVQLYEQTQRDL-RNKQTELQRVSHELDKTREQK 510
ER+N E+ + R+ T Q +R+L ++ E R +HE D+T K
Sbjct: 20 ERINEELTQMRILMTKQQEYTERRELIAREEMEKMRAAHERDRTALNK 67
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 23.8 bits (49), Expect = 3.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 434 PSATCATNKQNSSASPTNSTRPANRKTPSPAK 529
P T + + +S +PT S+ P P+P K
Sbjct: 161 PPITVSGSDMSSPGAPTGSSSPQITPRPTPVK 192
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.8 bits (49), Expect = 3.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 456 TNRTPARLPRTRQDPRTERRPRPRK 530
T PARL TR +PR + R RK
Sbjct: 1031 TKARPARLRATRPNPRFDFVERSRK 1055
>AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein.
Length = 93
Score = 23.8 bits (49), Expect = 3.7
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = -2
Query: 491 SSSWETRWSSVCLLRRSRWVCSYNCTVSSRRDLISMLTRSSCSVLF*SSRAVPFAFSKSM 312
+S W +R S +C++ S + S +C S+ + + C + S R + + KS
Sbjct: 31 TSCWPSRRSRLCIIALSLTLSSSSCKQSTSLSFVFL-----CCCVPSSERLIYYYMCKST 85
Query: 311 MRTST 297
T T
Sbjct: 86 KNTFT 90
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 23.4 bits (48), Expect = 4.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 450 QQTNRTPARLPRTRQDPRTERRPRPR 527
Q + TPA PR +D + R RP+
Sbjct: 652 QASEPTPALPPRADRDSKPSSRDRPK 677
>DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein.
Length = 407
Score = 22.6 bits (46), Expect = 8.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 468 PARLPRTRQDPRTERR 515
PAR R R+ PR ERR
Sbjct: 165 PARPYRVRRAPRAERR 180
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 22.6 bits (46), Expect = 8.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 312 HRLGEGKRYCSGASEEDRAAGARQHRDQ 395
HRL + A E RAA A++ R+Q
Sbjct: 354 HRLRDNSHQLVDALERQRAALAQEERNQ 381
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.309 0.126 0.317
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,434
Number of Sequences: 2352
Number of extensions: 7333
Number of successful extensions: 27
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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