Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i04r
         (714 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E4A1E7 Cluster: PREDICTED: hypothetical protein,...    35   2.3  
UniRef50_A5ZN00 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_UPI0000E4A1E7 Cluster: PREDICTED: hypothetical protein,
            partial; n=2; Strongylocentrotus purpuratus|Rep:
            PREDICTED: hypothetical protein, partial -
            Strongylocentrotus purpuratus
          Length = 1517

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +1

Query: 379  FQHPRNGM-VLSKNFSREAKLLKKYSFLVILFKTCSLIYFRYVLLSARPALHHEPSQDVI 555
            F HPRNG+ VL K++  E +     S  V+    C +I +R+ L   +P  +H     V+
Sbjct: 989  FSHPRNGLTVLPKSYYEELQFYDGGSSSVL---ACLMITYRHSLQYYQPLQNHNTGDMVM 1045

Query: 556  FSGARRSARFRVL 594
            F+   ++  +R++
Sbjct: 1046 FTFPPKTNAYRMM 1058



 Score = 34.3 bits (75), Expect = 3.0
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +1

Query: 379  FQHPRNGM-VLSKNFSREAKLLKKYSFLVILFKTCSLIYFRYVLLSARPALHHEPSQDVI 555
            F HPRNG+ VL K++  E +     S  V+    C +I +R+ L   +P  +H     V+
Sbjct: 1151 FSHPRNGLTVLPKSYYEELQFYDGGSSSVL---ACLMITYRHSLQYYQPLQNHNTGDMVM 1207

Query: 556  FSGARRSARFRVL 594
            F+   ++  +R++
Sbjct: 1208 FTFPPQNNAYRMM 1220


>UniRef50_A5ZN00 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 472

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 370 YC*FQHPRNGMVLSKNFSREAKLLKKYSFLVILFKTCSLIYFRY 501
           YC  Q P++  +L++N   +     K S L++L+K C L+ F Y
Sbjct: 419 YCLAQIPKDNQILTENMLLQQCENSKESTLLLLYKLCILVEFGY 462


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,907,896
Number of Sequences: 1657284
Number of extensions: 10590344
Number of successful extensions: 23256
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23251
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)