Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i04r
         (714 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0444 + 23633129-23633183,23633409-23633446,23633967-236340...    29   4.8  
08_02_0249 - 14770259-14770344,14770434-14770514,14770606-147710...    29   4.8  
04_03_0278 - 13761999-13762462,13762628-13762727,13763065-137632...    28   6.4  
08_02_0030 + 11380149-11380721,11380800-11381073,11381281-11382449     28   8.5  
01_03_0021 + 11720744-11720898,11720991-11721246                       28   8.5  

>11_06_0444 +
           23633129-23633183,23633409-23633446,23633967-23634001,
           23634353-23634753,23634845-23634925,23635015-23635100
          Length = 231

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/46 (23%), Positives = 27/46 (58%)
 Frame = +1

Query: 418 FSREAKLLKKYSFLVILFKTCSLIYFRYVLLSARPALHHEPSQDVI 555
           F+R  + + KY +L I + T + ++ ++ +L+     + +P +DV+
Sbjct: 129 FARSIESIPKYKYLKIKYGTENGVWIKFFMLNLEAIPYVDPEKDVV 174


>08_02_0249 -
           14770259-14770344,14770434-14770514,14770606-14771006,
           14771358-14771392,14771913-14771950,14772176-14772230
          Length = 231

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/46 (23%), Positives = 27/46 (58%)
 Frame = +1

Query: 418 FSREAKLLKKYSFLVILFKTCSLIYFRYVLLSARPALHHEPSQDVI 555
           F+R  + + KY +L I + T + ++ ++ +L+     + +P +DV+
Sbjct: 129 FARSIESIPKYKYLKIKYGTENGVWIKFFMLNLEAIPYVDPEKDVV 174


>04_03_0278 -
           13761999-13762462,13762628-13762727,13763065-13763289,
           13763347-13763415,13763605-13764432,13764706-13764779,
           13818821-13818905
          Length = 614

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/36 (50%), Positives = 20/36 (55%)
 Frame = -1

Query: 189 LAFPVLWVQETDILIYV*ISLH*IGTPRVVRFQMIL 82
           L F V  VQ+ +ILI   I  H I TPRV RF   L
Sbjct: 161 LDFHVFEVQDFNILIGHPIEKHLINTPRVGRFNFSL 196


>08_02_0030 + 11380149-11380721,11380800-11381073,11381281-11382449
          Length = 671

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 385 VGINNNNKYQSKGKRGW 335
           +G NNNN+Y+ +G +GW
Sbjct: 257 MGNNNNNEYRPQGGQGW 273


>01_03_0021 + 11720744-11720898,11720991-11721246
          Length = 136

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 121 DWYAARSSFPNDSCPPDACPEEIALSDKTAN 29
           DW   RSS  + S   D C +E A SD +A+
Sbjct: 41  DWEVTRSSGGDSSAVVDICAKEAACSDVSAD 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,668,611
Number of Sequences: 37544
Number of extensions: 272573
Number of successful extensions: 659
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)