Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10i04f
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 32 0.28
Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 29 0.50
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 29 0.50
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 29 0.50
U13876-16|AAW88394.1| 420|Caenorhabditis elegans Proteasome reg... 29 2.0
U13876-15|AAA21173.2| 438|Caenorhabditis elegans Proteasome reg... 29 2.0
Z68013-1|CAA92022.1| 201|Caenorhabditis elegans Hypothetical pr... 29 2.6
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 2.6
Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical pr... 29 3.5
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 29 3.5
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 29 3.5
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 29 3.5
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 29 3.5
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 29 3.5
Z81132-3|CAB03434.1| 365|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 4.6
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 4.6
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 28 4.6
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 4.6
U39853-5|AAK39223.1| 231|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical pr... 28 6.0
U53336-1|AAA96174.1| 158|Caenorhabditis elegans Temporarily ass... 28 6.0
AF303253-1|AAG50211.1| 158|Caenorhabditis elegans tissue inhibi... 28 6.0
Z92813-7|CAB07283.2| 758|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z78544-5|CAB01759.2| 324|Caenorhabditis elegans Hypothetical pr... 27 8.0
AY398504-1|AAQ96213.1| 324|Caenorhabditis elegans SEL-7 protein. 27 8.0
AL117203-3|CAB55101.1| 448|Caenorhabditis elegans Hypothetical ... 27 8.0
AL031265-2|CAE48506.1| 324|Caenorhabditis elegans Hypothetical ... 27 8.0
AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical... 27 8.0
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 232 VTVSERVTSVDTARSSVDTPSV--LPDFNIPTPMNTPVNEITPEILLPISET 381
VT+ E T RS+V TP+V + +P P+ + + IT +++ P+ T
Sbjct: 1551 VTIPESAHQTQTLRSAVHTPTVPKILGVTVPEPLRSTIPGITVDLVDPVPRT 1602
>Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical
protein M110.4b protein.
Length = 1155
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +1
Query: 292 SVLPDFNIPTP---MNTPVNEITPEILLPISETPKIPTET---IRKAATLL 426
+VLP+F++P P P I P+++ + +TP+ P + +++A TL+
Sbjct: 220 AVLPNFSVPPPALGQTPPAASIAPQVVPSVPKTPEAPAKADYEVKQAETLV 270
>Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical
protein M110.4a protein.
Length = 1156
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +1
Query: 292 SVLPDFNIPTP---MNTPVNEITPEILLPISETPKIPTET---IRKAATLL 426
+VLP+F++P P P I P+++ + +TP+ P + +++A TL+
Sbjct: 220 AVLPNFSVPPPALGQTPPAASIAPQVVPSVPKTPEAPAKADYEVKQAETLV 270
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 29.5 bits (63), Expect(2) = 0.50
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 274 SSVDTPSVLPDFN-IPTPMNTPVNEITPEILLPISETPKI 390
SS DT L + N +P+P P +E P++ ETPK+
Sbjct: 171 SSTDTSLSLSERNNVPSPAPVPYSESAPQLKTFTGETPKL 210
Score = 20.6 bits (41), Expect(2) = 0.50
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +1
Query: 85 SPIVETMSSEQGQGPLSAGSNQLFATENLD 174
SP +S PL+ G+N L + D
Sbjct: 145 SPSTSVSASSSSARPLTNGNNHLSTASSTD 174
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 29.5 bits (63), Expect(2) = 0.50
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 274 SSVDTPSVLPDFN-IPTPMNTPVNEITPEILLPISETPKI 390
SS DT L + N +P+P P +E P++ ETPK+
Sbjct: 171 SSTDTSLSLSERNNVPSPAPVPYSESAPQLKTFTGETPKL 210
Score = 20.6 bits (41), Expect(2) = 0.50
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +1
Query: 85 SPIVETMSSEQGQGPLSAGSNQLFATENLD 174
SP +S PL+ G+N L + D
Sbjct: 145 SPSTSVSASSSSARPLTNGNNHLSTASSTD 174
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 29.5 bits (63), Expect(2) = 0.50
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 274 SSVDTPSVLPDFN-IPTPMNTPVNEITPEILLPISETPKI 390
SS DT L + N +P+P P +E P++ ETPK+
Sbjct: 171 SSTDTSLSLSERNNVPSPAPVPYSESAPQLKTFTGETPKL 210
Score = 20.6 bits (41), Expect(2) = 0.50
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +1
Query: 85 SPIVETMSSEQGQGPLSAGSNQLFATENLD 174
SP +S PL+ G+N L + D
Sbjct: 145 SPSTSVSASSSSARPLTNGNNHLSTASSTD 174
>U13876-16|AAW88394.1| 420|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 6, isoform b
protein.
Length = 420
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 79 MESPIVETMSSEQGQGPLSAGSNQLFATENLDLPDDTFRMGLDNFHLIGENV 234
+E + + + ++ G L G L E + +PD+ ++ LD H +GE V
Sbjct: 359 VEKKLSQMILDQKLSGSLDQGEGMLIVFE-IAVPDEAYQTALDTIHAMGEVV 409
>U13876-15|AAA21173.2| 438|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 6, isoform a
protein.
Length = 438
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 79 MESPIVETMSSEQGQGPLSAGSNQLFATENLDLPDDTFRMGLDNFHLIGENV 234
+E + + + ++ G L G L E + +PD+ ++ LD H +GE V
Sbjct: 377 VEKKLSQMILDQKLSGSLDQGEGMLIVFE-IAVPDEAYQTALDTIHAMGEVV 427
>Z68013-1|CAA92022.1| 201|Caenorhabditis elegans Hypothetical
protein W02H3.1 protein.
Length = 201
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 354 GRNLIDRCVHRCRNVKVGQYAW 289
G+N+I CVH RN G+YA+
Sbjct: 61 GQNIIKMCVHLPRNSNAGKYAY 82
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 274 SSVDTPSVLPDFNIPTPMNTPVNEITPEILLPISE-TPKIP 393
S V P+ P+F++P P P+N P +++ E P+ P
Sbjct: 245 SMVPLPATAPNFSLPPPGYNPLNPPPPGVVVAAGEYNPEAP 285
>Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical
protein C50B6.7 protein.
Length = 713
Score = 28.7 bits (61), Expect = 3.5
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +1
Query: 148 QLFATENLDLPD--DTFRMGLDNFHLIGENVTVSERVTS-VDTARSSVDTPSVLPDFNIP 318
++FAT NL D D F GLDN +G +TV + TS + +S+ S+
Sbjct: 457 KIFAT-NLPAGDYCDHFSGGLDNGKCVGTKITVRDDHTSYLSVPSNSIVAISLDSKLTPY 515
Query: 319 TPMNTPVNEITPEILLPISETP 384
TP P T ILL P
Sbjct: 516 TPPAPPSGYSTTVILLKKDTNP 537
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 214 HLIGENVTVSERVTSVDTARSSVDTPSVLPDFNIPTPMNTPVNEITPEILLPISETPK 387
H++ + T SV T S +++PS D + P + ++ P+I+ P S + K
Sbjct: 665 HIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASSK 722
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 214 HLIGENVTVSERVTSVDTARSSVDTPSVLPDFNIPTPMNTPVNEITPEILLPISETPK 387
H++ + T SV T S +++PS D + P + ++ P+I+ P S + K
Sbjct: 665 HIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASSK 722
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 313 IPTPMNTPVNEITPEILLPISETPKIPTETIRKAA--TLLKLSIVKKDEDDVFVKPSPMT 486
+P NT V+ TP ++ + T +PT AA T L S+ +E D +P++
Sbjct: 510 VPIATNTSVSSSTPRSVVRTTSTSSVPTTPTGLAAPKTPLSASVSATNEPDSTTNGTPLS 569
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 214 HLIGENVTVSERVTSVDTARSSVDTPSVLPDFNIPTPMNTPVNEITPEILLPISETPK 387
H++ + T SV T S +++PS D + P + ++ P+I+ P S + K
Sbjct: 665 HIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASSK 722
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 214 HLIGENVTVSERVTSVDTARSSVDTPSVLPDFNIPTPMNTPVNEITPEILLPISETPK 387
H++ + T SV T S +++PS D + P + ++ P+I+ P S + K
Sbjct: 569 HIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASSK 626
>Z81132-3|CAB03434.1| 365|Caenorhabditis elegans Hypothetical
protein T26E4.4 protein.
Length = 365
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 217 LIGENVTVSERVTSVDTARSSVDTPSVLPDFNIPTPMNTPVNEITPEILLPISETPK 387
+ G +V S+ V + SSV P N P P N+P ++LP + TP+
Sbjct: 264 VFGNDVNFSKAVFEDRVSNSSVIPNRTTPPLNFPIPENSP----KYSVILPQNSTPE 316
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 319 TPMNTPVNEITPEILLPISETPKIPTETIRKAA 417
TP PV E+TPEI+ + E I T AA
Sbjct: 700 TPAAEPVKEVTPEIVEEVFEKKTITPSTAAAAA 732
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 319 TPMNTPVNEITPEILLPISETPKIPTETIRKAA 417
TP PV E+TPEI+ + E I T AA
Sbjct: 630 TPAAEPVKEVTPEIVEEVFEKKTITPSTAAAAA 662
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 319 TPMNTPVNEITPEILLPISETPKIPTETIRKAA 417
TP PV E+TPEI+ + E I T AA
Sbjct: 445 TPAAEPVKEVTPEIVEEVFEKKTITPSTAAAAA 477
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 319 TPMNTPVNEITPEILLPISETPKIPTETIRKAA 417
TP PV E+TPEI+ + E I T AA
Sbjct: 489 TPAAEPVKEVTPEIVEEVFEKKTITPSTAAAAA 521
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 319 TPMNTPVNEITPEILLPISETPKIPTETIRKAA 417
TP PV E+TPEI+ + E I T AA
Sbjct: 630 TPAAEPVKEVTPEIVEEVFEKKTITPSTAAAAA 662
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 319 TPMNTPVNEITPEILLPISETPKIPTETIRKAA 417
TP PV E+TPEI+ + E I T AA
Sbjct: 547 TPAAEPVKEVTPEIVEEVFEKKTITPSTAAAAA 579
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 319 TPMNTPVNEITPEILLPISETPKIPTETIRKAA 417
TP PV E+TPEI+ + E I T AA
Sbjct: 815 TPAAEPVKEVTPEIVEEVFEKKTITPSTAAAAA 847
>U39853-5|AAK39223.1| 231|Caenorhabditis elegans Hypothetical
protein F13B9.2 protein.
Length = 231
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 238 VSERVTSVDTARSSVDTPSVLPDFNIPTPMNTPVNEITPEILLPISETPKIPTE 399
+SE ++ + A V P++N P TPV +PE +P T ++P E
Sbjct: 19 ISESLSKISIALKPYQYQYVDPNYNYPKASETPV--ASPENEIPAFRTFELPKE 70
>Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical
protein F27E5.3 protein.
Length = 490
Score = 27.9 bits (59), Expect = 6.0
Identities = 26/125 (20%), Positives = 46/125 (36%)
Frame = +1
Query: 163 ENLDLPDDTFRMGLDNFHLIGENVTVSERVTSVDTARSSVDTPSVLPDFNIPTPMNTPVN 342
E + DD +F + + + ++VDT SS ++ N N P
Sbjct: 267 EKKKMKDDLAPPAAISFSKLSPSTVTTSGPSTVDTTGSSGNSTDPTTRSNTS---NVPSG 323
Query: 343 EITPEILLPISETPKIPTETIRKAATLLKLSIVKKDEDDVFVKPSPMTDGMSPARMLQFE 522
I PI +P + I + K +DDV P D +SP ++++
Sbjct: 324 TSEASITNPILHSPPSKFDNIPSPPKAFSDDLRKSPDDDVKQNPQYGMDIVSPVQLVKSS 383
Query: 523 IDGAN 537
G++
Sbjct: 384 DKGSD 388
>U53336-1|AAA96174.1| 158|Caenorhabditis elegans Temporarily
assigned gene nameprotein 225 protein.
Length = 158
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 175 LPDDTFRMGLDNFHLIGENVTVSERVTSVDTARSSVDTPSVLP 303
LP+ + R GL+N ++V V ++ +++ T + TPS P
Sbjct: 52 LPEGSERKGLNNLRYTVQHVEVFKKPSNMTTLPDEIFTPSEAP 94
>AF303253-1|AAG50211.1| 158|Caenorhabditis elegans tissue inhibitor
of metalloproteinase2 protein.
Length = 158
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 175 LPDDTFRMGLDNFHLIGENVTVSERVTSVDTARSSVDTPSVLP 303
LP+ + R GL+N ++V V ++ +++ T + TPS P
Sbjct: 52 LPEGSERKGLNNLRYTVQHVEVFKKPSNMTTLPDEIFTPSEAP 94
>Z92813-7|CAB07283.2| 758|Caenorhabditis elegans Hypothetical
protein T28A8.7 protein.
Length = 758
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 277 SVDTPSVLPDFNIPTPMNTPVNEITPEILLPISETPKIPTETIRKAATLLKLS 435
++DT + D I TP + E+L+P+ + IP E ++A + +L+
Sbjct: 692 TLDTNFITLDKKISAFSATPWKTLIKEVLMPLVKRKFIPPEHFKQAGVIRQLA 744
>Z78544-5|CAB01759.2| 324|Caenorhabditis elegans Hypothetical
protein K04G11.2 protein.
Length = 324
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 298 LPDFNIPTPMNTPVNEITPEILLPISETPKIPTETIRKAATLLKLSIVKKDED 456
LPD +P+ +P + E P S TP T K ++ LK + +D D
Sbjct: 56 LPDQRLPSIFTSPPQTVISEAP-PQSFTPSATNSTSDKTSSSLKTELKTEDSD 107
>AY398504-1|AAQ96213.1| 324|Caenorhabditis elegans SEL-7 protein.
Length = 324
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 298 LPDFNIPTPMNTPVNEITPEILLPISETPKIPTETIRKAATLLKLSIVKKDED 456
LPD +P+ +P + E P S TP T K ++ LK + +D D
Sbjct: 56 LPDQRLPSIFTSPPQTVISEAP-PQSFTPSATNSTSDKTSSSLKTELKTEDSD 107
>AL117203-3|CAB55101.1| 448|Caenorhabditis elegans Hypothetical
protein Y48C3A.4 protein.
Length = 448
Score = 27.5 bits (58), Expect = 8.0
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 298 LPDFNIPTPMNTPVNEITPEILLPISETPKIPTETIRKAATLLKL-SIVKKDEDDVFVKP 474
LP F+ P + P +TP I+ +S TLL++ S+ K + +
Sbjct: 99 LPLFSPTVPTSLPTPTLTPTIISSVSPQCSTSPGVFNTLNTLLQMESLSKCSTPPINISH 158
Query: 475 SPMTDGMSPARML 513
SP T + R L
Sbjct: 159 SPTTTPLEKMRKL 171
>AL031265-2|CAE48506.1| 324|Caenorhabditis elegans Hypothetical
protein K04G11.2 protein.
Length = 324
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 298 LPDFNIPTPMNTPVNEITPEILLPISETPKIPTETIRKAATLLKLSIVKKDED 456
LPD +P+ +P + E P S TP T K ++ LK + +D D
Sbjct: 56 LPDQRLPSIFTSPPQTVISEAP-PQSFTPSATNSTSDKTSSSLKTELKTEDSD 107
>AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical
protein C17H12.9 protein.
Length = 459
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 193 RMGLDNFHLIGENVTVSERVTSVDTARSSVDTPSVLPDFNIPTPMNT 333
R G DN+ + N+ +++V + + V PS P+F PT N+
Sbjct: 79 RQGYDNYATL-TNLQPLPPISTVTSKSTKVQRPSPSPNFYFPTSSNS 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,912,277
Number of Sequences: 27780
Number of extensions: 263079
Number of successful extensions: 831
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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