Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i03r
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical pr...    37   0.014
Z81474-5|CAB03906.1|  361|Caenorhabditis elegans Hypothetical pr...    32   0.39 
AL032626-23|CAE17974.1|   88|Caenorhabditis elegans Hypothetical...    31   0.67 
AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical ...    29   2.1  
U70858-4|AAB09178.1|  294|Caenorhabditis elegans Serpentine rece...    28   4.8  
AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical ...    28   4.8  
AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical...    27   8.3  

>U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical
           protein F16F9.1 protein.
          Length = 157

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 27/83 (32%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
 Frame = -2

Query: 621 TQVITATPISGDIANSSRKY-LDCHHCGMRVHTLVVREIGLLNHXXXXXXXXXXXXXXXX 445
           T VI  TP     A S   Y   C+ CG  VHTL    IG L                  
Sbjct: 73  TVVIVTTPKP---APSFASYETTCYSCGKYVHTLPKFVIGSLTWIVFILVLICFFPLAFV 129

Query: 444 XXXXLDCFKNHNHYCPNCNKVIG 376
                 C K+ +HYCP CN ++G
Sbjct: 130 PFCLDSC-KDAHHYCPRCNALLG 151


>Z81474-5|CAB03906.1|  361|Caenorhabditis elegans Hypothetical
           protein C18D4.9 protein.
          Length = 361

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = -2

Query: 270 LAMRLIHVLIYRYIIISIVCFFKITKCD*TVDKIKRLMR-IYVHFWKTDKKGYNMLYVVV 94
           + +++ HVLI+   I + + FF   KC  +++ I + ++ IY+ F   D  GY +++V V
Sbjct: 115 VTLQVFHVLIFMLAIQNFLRFFFPLKCSSSLNSIHKYVKPIYICFVLKDIAGY-LIWVAV 173

Query: 93  QHRL 82
              L
Sbjct: 174 DRFL 177


>AL032626-23|CAE17974.1|   88|Caenorhabditis elegans Hypothetical
           protein Y37D8A.26 protein.
          Length = 88

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 426 CFKNHNHYCPNCNKVIG 376
           CF + +H CPNCNK +G
Sbjct: 67  CFMDVHHRCPNCNKSLG 83


>AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical
           protein Y37D8A.6 protein.
          Length = 132

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 429 DCFKNHNHYCPNCNKVIGYQ 370
           D FK+  H CPNC  ++ Y+
Sbjct: 111 DGFKDSRHSCPNCGTILSYK 130


>U70858-4|AAB09178.1|  294|Caenorhabditis elegans Serpentine
           receptor, class x protein33 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 414 HNHYCPNCNKVIGYQLPFNYKKIF 343
           H H+  + N+ I    PF+YK IF
Sbjct: 92  HTHFLSSVNRFIAVFFPFSYKNIF 115


>AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical
           protein K09F6.6 protein.
          Length = 1010

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +1

Query: 481 QRYDVVQ--EPYFSHDQRVYSHAAVVAIQVLSRRVCYIPGNGCSCYDLCPR 627
           QRY+V    + +  HD+R+YS  AV    + + ++C    + C  + +C +
Sbjct: 137 QRYEVFNTIDLWIDHDKRLYSFCAVCQSTLNNSKLC--TNSECQRFSMCQK 185


>AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical
           protein Y87G2A.19 protein.
          Length = 110

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 429 DCFKNHNHYCPNCNKVIG 376
           + FK+  HYCP+C   IG
Sbjct: 84  ETFKDAEHYCPSCRAWIG 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,779,743
Number of Sequences: 27780
Number of extensions: 200927
Number of successful extensions: 595
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)