Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10i03f
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      25   0.68 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   3.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   3.6  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 430 AFDVVGFCASLIRLGRSKSWGM 365
           +F  +G CAS I++  SK W M
Sbjct: 62  SFACIGRCASYIQVSGSKIWQM 83


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +1

Query: 493  TCTRQMTTKETARIP*KTIPTTIRWCT 573
            T TR+ TT         T PTT  W T
Sbjct: 1055 TTTRRTTTTRPTTTSTTTRPTTTNWPT 1081


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 442 ADEAAFDVVGFCASLIRLGRSKSWGMFI 359
           A+   F + G  ASL+ L  +K W  F+
Sbjct: 86  ANRLFFFLTGVMASLLFLNLAKRWPKFV 113


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 442 ADEAAFDVVGFCASLIRLGRSKSWGMFI 359
           A+   F + G  ASL+ L  +K W  F+
Sbjct: 86  ANRLFFFLTGVMASLLFLNLAKRWPKFV 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,128
Number of Sequences: 336
Number of extensions: 2927
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)