BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10i03f (621 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X54468-1|CAA38350.1| 843|Drosophila melanogaster protein ( D.me... 29 6.7 AY118525-1|AAM49894.1| 843|Drosophila melanogaster LD23131p pro... 29 6.7 AL021106-12|CAA15946.1| 843|Drosophila melanogaster EG:86E4.6,F... 29 6.7 AL021086-1|CAA15935.1| 843|Drosophila melanogaster EG:86E4.6,FB... 29 6.7 AE014298-286|AAS65246.1| 843|Drosophila melanogaster CG11579-PE... 29 6.7 AE014298-285|AAF45686.2| 843|Drosophila melanogaster CG11579-PD... 29 6.7 AE014298-284|AAF45688.2| 843|Drosophila melanogaster CG11579-PB... 29 6.7 AE014298-283|AAF45687.2| 843|Drosophila melanogaster CG11579-PA... 29 6.7 M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein... 28 8.9 BT022793-1|AAY55209.1| 389|Drosophila melanogaster IP13578p pro... 28 8.9 BT022790-1|AAY55206.1| 389|Drosophila melanogaster IP13478p pro... 28 8.9 BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro... 28 8.9 AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro... 28 8.9 AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB... 28 8.9 AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA... 28 8.9 AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD... 28 8.9 AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC... 28 8.9 AE014134-411|AAF51253.2| 575|Drosophila melanogaster CG31684-PA... 28 8.9 >X54468-1|CAA38350.1| 843|Drosophila melanogaster protein ( D.melanogaster arm E16and E9 genes for armadillo protein. ). Length = 843 Score = 28.7 bits (61), Expect = 6.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 197 DEVPIFGLPRLPLHQPTGGGGTFGRPSIGSS 289 D +PI + L + P GGGG G P G + Sbjct: 750 DTLPIDSMQGLEISSPVGGGGAGGAPGNGGA 780 >AY118525-1|AAM49894.1| 843|Drosophila melanogaster LD23131p protein. Length = 843 Score = 28.7 bits (61), Expect = 6.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 197 DEVPIFGLPRLPLHQPTGGGGTFGRPSIGSS 289 D +PI + L + P GGGG G P G + Sbjct: 750 DTLPIDSMQGLEISSPVGGGGAGGAPGNGGA 780 >AL021106-12|CAA15946.1| 843|Drosophila melanogaster EG:86E4.6,FBgn0000117;arm protein. Length = 843 Score = 28.7 bits (61), Expect = 6.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 197 DEVPIFGLPRLPLHQPTGGGGTFGRPSIGSS 289 D +PI + L + P GGGG G P G + Sbjct: 750 DTLPIDSMQGLEISSPVGGGGAGGAPGNGGA 780 >AL021086-1|CAA15935.1| 843|Drosophila melanogaster EG:86E4.6,FBgn0000117;arm protein. Length = 843 Score = 28.7 bits (61), Expect = 6.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 197 DEVPIFGLPRLPLHQPTGGGGTFGRPSIGSS 289 D +PI + L + P GGGG G P G + Sbjct: 750 DTLPIDSMQGLEISSPVGGGGAGGAPGNGGA 780 >AE014298-286|AAS65246.1| 843|Drosophila melanogaster CG11579-PE, isoform E protein. Length = 843 Score = 28.7 bits (61), Expect = 6.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 197 DEVPIFGLPRLPLHQPTGGGGTFGRPSIGSS 289 D +PI + L + P GGGG G P G + Sbjct: 750 DTLPIDSMQGLEISSPVGGGGAGGAPGNGGA 780 >AE014298-285|AAF45686.2| 843|Drosophila melanogaster CG11579-PD, isoform D protein. Length = 843 Score = 28.7 bits (61), Expect = 6.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 197 DEVPIFGLPRLPLHQPTGGGGTFGRPSIGSS 289 D +PI + L + P GGGG G P G + Sbjct: 750 DTLPIDSMQGLEISSPVGGGGAGGAPGNGGA 780 >AE014298-284|AAF45688.2| 843|Drosophila melanogaster CG11579-PB, isoform B protein. Length = 843 Score = 28.7 bits (61), Expect = 6.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 197 DEVPIFGLPRLPLHQPTGGGGTFGRPSIGSS 289 D +PI + L + P GGGG G P G + Sbjct: 750 DTLPIDSMQGLEISSPVGGGGAGGAPGNGGA 780 >AE014298-283|AAF45687.2| 843|Drosophila melanogaster CG11579-PA, isoform A protein. Length = 843 Score = 28.7 bits (61), Expect = 6.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 197 DEVPIFGLPRLPLHQPTGGGGTFGRPSIGSS 289 D +PI + L + P GGGG G P G + Sbjct: 750 DTLPIDSMQGLEISSPVGGGGAGGAPGNGGA 780 >M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein protein. Length = 1638 Score = 28.3 bits (60), Expect = 8.9 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 Query: 415 LQRQMQLHLLMILSRNISYRIELVEATCTRQMTTKETA 528 LQ ++L L +L+ R+E V+ CTR+ TT ETA Sbjct: 439 LQAAIELRALRVLNFQRQLRMEFVQ--CTRRDTTLETA 474 >BT022793-1|AAY55209.1| 389|Drosophila melanogaster IP13578p protein. Length = 389 Score = 28.3 bits (60), Expect = 8.9 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -2 Query: 398 NPTRSIQILGDVYKHHPFLI*TCDLSPWHTRPPR 297 N S + + + +P L+ DL+PW+ +PPR Sbjct: 39 NKNISFWLYSNSTRENPILLDPLDLNPWNFQPPR 72 >BT022790-1|AAY55206.1| 389|Drosophila melanogaster IP13478p protein. Length = 389 Score = 28.3 bits (60), Expect = 8.9 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -2 Query: 398 NPTRSIQILGDVYKHHPFLI*TCDLSPWHTRPPR 297 N S + + + +P L+ DL+PW+ +PPR Sbjct: 39 NKNISFWLYSNSTRENPILLDPLDLNPWNFQPPR 72 >BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p protein. Length = 1634 Score = 28.3 bits (60), Expect = 8.9 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 Query: 415 LQRQMQLHLLMILSRNISYRIELVEATCTRQMTTKETA 528 LQ ++L L +L+ R+E V+ CTR+ TT ETA Sbjct: 435 LQAAIELRALRVLNFQRQLRMEFVQ--CTRRDTTLETA 470 >AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p protein. Length = 1638 Score = 28.3 bits (60), Expect = 8.9 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 Query: 415 LQRQMQLHLLMILSRNISYRIELVEATCTRQMTTKETA 528 LQ ++L L +L+ R+E V+ CTR+ TT ETA Sbjct: 439 LQAAIELRALRVLNFQRQLRMEFVQ--CTRRDTTLETA 474 >AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB, isoform B protein. Length = 1638 Score = 28.3 bits (60), Expect = 8.9 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 Query: 415 LQRQMQLHLLMILSRNISYRIELVEATCTRQMTTKETA 528 LQ ++L L +L+ R+E V+ CTR+ TT ETA Sbjct: 439 LQAAIELRALRVLNFQRQLRMEFVQ--CTRRDTTLETA 474 >AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA, isoform A protein. Length = 1638 Score = 28.3 bits (60), Expect = 8.9 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 Query: 415 LQRQMQLHLLMILSRNISYRIELVEATCTRQMTTKETA 528 LQ ++L L +L+ R+E V+ CTR+ TT ETA Sbjct: 439 LQAAIELRALRVLNFQRQLRMEFVQ--CTRRDTTLETA 474 >AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD, isoform D protein. Length = 1634 Score = 28.3 bits (60), Expect = 8.9 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 Query: 415 LQRQMQLHLLMILSRNISYRIELVEATCTRQMTTKETA 528 LQ ++L L +L+ R+E V+ CTR+ TT ETA Sbjct: 435 LQAAIELRALRVLNFQRQLRMEFVQ--CTRRDTTLETA 470 >AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC, isoform C protein. Length = 1634 Score = 28.3 bits (60), Expect = 8.9 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 Query: 415 LQRQMQLHLLMILSRNISYRIELVEATCTRQMTTKETA 528 LQ ++L L +L+ R+E V+ CTR+ TT ETA Sbjct: 435 LQAAIELRALRVLNFQRQLRMEFVQ--CTRRDTTLETA 470 >AE014134-411|AAF51253.2| 575|Drosophila melanogaster CG31684-PA protein. Length = 575 Score = 28.3 bits (60), Expect = 8.9 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -2 Query: 368 DVYKHHPFLI*TCDLSPWHTRPPR 297 D + +P L+ DL+PW+ +PPR Sbjct: 13 DSTRENPILLDPLDLNPWNFQPPR 36 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,332,286 Number of Sequences: 53049 Number of extensions: 542450 Number of successful extensions: 1534 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1425 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1534 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2559155400 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -