Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10i02f
(584 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0214 + 21616019-21616086,21616205-21616252,21616336-216164... 127 6e-30
02_01_0127 - 926333-926359,926637-926708,926928-927032,927129-92... 96 2e-20
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 81 6e-16
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 30 1.2
05_07_0257 + 28719980-28720220,28721412-28721455,28722521-287225... 30 1.6
11_06_0506 - 24380469-24380632,24381737-24383893,24384488-243845... 29 2.7
06_03_0650 + 23157130-23157582,23157687-23157898,23157982-231581... 29 2.7
08_01_0654 - 5639419-5641449 28 4.8
07_03_0725 + 20991640-20992471,20993308-20993418,20993542-209937... 28 4.8
06_01_0541 - 3874476-3874694,3874816-3874868,3875944-3876055,387... 28 4.8
06_01_0531 - 3836420-3836638,3836760-3836812,3837888-3837999,383... 28 4.8
05_04_0392 - 20889699-20891726 28 4.8
07_03_0366 + 17321948-17322331 28 6.3
06_02_0214 + 13141213-13143741 28 6.3
01_01_0887 + 6978869-6979053,6979183-6979558,6979651-6979734,697... 28 6.3
10_05_0041 - 8469769-8470164 27 8.3
07_03_1425 + 26489446-26491425 27 8.3
06_01_0060 + 522208-522756,522901-522912 27 8.3
05_03_0612 - 16177362-16178102,16178404-16178539,16180612-161806... 27 8.3
04_04_0774 + 27986999-27987278,27987380-27987496,27987605-279877... 27 8.3
03_05_0655 + 26491238-26491696 27 8.3
03_01_0618 + 4543013-4543111,4544100-4544177,4544739-4544873,454... 27 8.3
02_05_0419 - 28814754-28816114,28816749-28817435,28817554-288177... 27 8.3
>09_06_0214 +
21616019-21616086,21616205-21616252,21616336-21616427,
21616555-21616645,21617660-21617720,21617810-21617887,
21617979-21618029,21618118-21618191,21618306-21618378,
21618762-21618819,21618899-21618969,21619045-21619110,
21619327-21619359,21619445-21619497,21619572-21619647,
21619729-21619785,21619874-21619957,21620037-21620135,
21620260-21620364,21620575-21620643,21621019-21621108
Length = 498
Score = 127 bits (307), Expect = 6e-30
Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 2/113 (1%)
Frame = +2
Query: 251 EKEFKGFKTLFSRFLAEQGPSVTWEKIEKLPEGAVIDYNSLSTPTTD--NVHHMLDKLVV 424
E E GF +L SR+L+ + + W KI+ + V+ Y++LS D +LDKLVV
Sbjct: 24 ENEKSGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLSAAPEDLNETKKLLDKLVV 83
Query: 425 VKLNGGLGTSMGCKGPKSVIQVRNDLTFLDLTVQQIEHLNKTYKCNVPLVLMN 583
+KLNGGLGT+MGC GPKSVI+VRN TFLDL V QIE LNK Y CNVPL+LMN
Sbjct: 84 LKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCNVPLLLMN 136
>02_01_0127 -
926333-926359,926637-926708,926928-927032,927129-927227,
927298-927381,927462-927518,927596-927671,927755-927807,
927899-927931,928100-928165,928556-928628,928721-928794,
929177-929237,929354-929536,929656-929703,929810-929868
Length = 389
Score = 95.9 bits (228), Expect = 2e-20
Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 EKEFKGFKTLFSRFLAEQGPSVTWEKIEKLPEGAVIDYNSLSTPTTD--NVHHMLDKLVV 424
+ E GF +L +R+L+ + V W KI + V+ Y++L+ P D +L+KL V
Sbjct: 21 DNEKSGFISLVARYLSGEEEHVEWAKIHTPTDEVVVPYDTLAAPPEDLEETKKLLNKLAV 80
Query: 425 VKLNGGLGTSMGCKGPKSVIQVRNDLTFLDLTVQQIE 535
+KLNGGLGT+MGC GPKSVI+VRN TFLDL V QIE
Sbjct: 81 LKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIE 117
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 81.0 bits (191), Expect = 6e-16
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Frame = +2
Query: 251 EKEFKGFKTLFSRFLA-EQGPSVTWEKIEKLPEGAVIDYNSLSTPTTD--NVHHMLDKLV 421
+++ F L SR+L E+ + W K+E+ V+ Y+SL D + ++L+KL
Sbjct: 164 DEDKDSFMHLVSRYLIREEKEMIDWNKVERPTPEMVVPYDSLVQAPRDIPEIRNLLNKLA 223
Query: 422 VVKLNGGLGTSMGCKGPKSVIQVRNDLTFLDLTVQQIEHLNK 547
V+KLNGGLGT+M C PK I+VR+ LTFLDL + Q E + K
Sbjct: 224 VLKLNGGLGTTMECVAPKCTIEVRSGLTFLDLAIMQTEIVEK 265
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 77 KEMKPETNDSDKKIRSHQRTPSGSRDFKEATKRDA 181
K KP T+D KK R H + S S D+ + D+
Sbjct: 162 KTQKPPTHDKQKKKRKHYSSDSYSSDYSDTQSSDS 196
>05_07_0257 +
28719980-28720220,28721412-28721455,28722521-28722590,
28722693-28722816,28723420-28724060,28725100-28725364,
28725434-28725713,28726042-28726209,28726867-28727358,
28727432-28727689
Length = 860
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 188 RLEVELEKLISTAPETR-RPQLEKEFKGFKTLFSRFLAEQGPSVTWEKIEKLPEGAVIDY 364
R + + +K I ETR RP + F+G KT + +GP+ ++ LP+ +V D
Sbjct: 87 RRKRDKKKEIKAPQETRPRPFYKPAFRGSKTGGDSTGSGKGPTKKETELHSLPKSSVSDS 146
Query: 365 NSLSTPT 385
S PT
Sbjct: 147 VKESNPT 153
>11_06_0506 -
24380469-24380632,24381737-24383893,24384488-24384541,
24384543-24384597,24384914-24384916,24385192-24385231,
24385576-24385632,24388124-24388412,24389764-24389771,
24390633-24390688,24391207-24391488,24391651-24391811,
24391887-24392121,24392860-24392943,24393022-24393117,
24393333-24394055,24396523-24396987
Length = 1642
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 184 RSTGGGAGEAHLHGPGNQASAARERVQRLQDALQQILG 297
R GGG G G G + ERV+ L++ QI+G
Sbjct: 47 RPVGGGGGGRGGGGGGGEEEGEHERVRTLREIKNQIIG 84
>06_03_0650 +
23157130-23157582,23157687-23157898,23157982-23158128,
23158214-23158347,23158442-23158551,23158711-23158817,
23159045-23159183,23159286-23159402,23159737-23159844,
23159927-23159998,23160108-23160230,23160336-23160495,
23160585-23160706,23160825-23160962,23161042-23161184,
23161305-23161367,23161567-23161630,23161709-23161844,
23162123-23162196,23162764-23162858,23162951-23162982,
23163104-23163276
Length = 973
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 193 GGGAGEAHLHGPGNQASAARERVQRLQDALQQ 288
GGG G H HG G R Q LQ ++ Q
Sbjct: 14 GGGRGHGHGHGHGGGGGGPAARKQPLQSSMAQ 45
>08_01_0654 - 5639419-5641449
Length = 676
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/89 (24%), Positives = 34/89 (38%)
Frame = -2
Query: 475 FGALTAHGCTQASVKLHHHQLVEHMVHVVRRWRGQTVIIDYSSFWKLLDFLPCYRRTLFS 296
F L +G T + +L++H V V+RR G+ + D + KL +R L +
Sbjct: 258 FEVLATNGDTHLGGEDFDQRLMDHFVKVIRRKHGRDITGDARALGKLRRECERAKRALSN 317
Query: 295 QESXXXXXXXXXXXXXXRTPGFRGRGDEL 209
Q P R R +EL
Sbjct: 318 QHQVRVEVESLFDGVDLSEPLSRARFEEL 346
>07_03_0725 +
20991640-20992471,20993308-20993418,20993542-20993739,
20993860-20993891,20993943-20994153,20994806-20995043,
20995507-20995657,20996171-20996533
Length = 711
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 143 GSRDFKEATKRDALARLE-VELEKLISTAPETRRPQLEKEFKGFKTL-FSRFLAEQGPSV 316
G ++FK + +A+L+ L +L+ + L E+ ++L F F EQGP +
Sbjct: 412 GLKEFKNEIQ--LIAKLQHTNLVRLVGCCVQEEEKMLVYEYMPNRSLDFFIFDQEQGPLL 469
Query: 317 TWEKIEKLPEGAV 355
W+K + EG V
Sbjct: 470 DWKKRLHIIEGVV 482
>06_01_0541 -
3874476-3874694,3874816-3874868,3875944-3876055,
3876143-3876321,3876358-3877195
Length = 466
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 163 GHQT*CPRSTGGGAGEAHLHGPGNQASAARERVQRLQDALQQILG 297
GH+T PR+ +GE P + ++A +R +L +I G
Sbjct: 13 GHKTLLPRAFSSSSGEGMFPPPTSDPASADQRTTKLSSHFAEIRG 57
>06_01_0531 -
3836420-3836638,3836760-3836812,3837888-3837999,
3838087-3838265,3838302-3839139
Length = 466
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 163 GHQT*CPRSTGGGAGEAHLHGPGNQASAARERVQRLQDALQQILG 297
GH+T PR+ +GE P + ++A +R +L +I G
Sbjct: 13 GHKTLLPRAFSSSSGEGMFPPPTSDPASADQRTTKLSSHFAEIRG 57
>05_04_0392 - 20889699-20891726
Length = 675
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/89 (24%), Positives = 34/89 (38%)
Frame = -2
Query: 475 FGALTAHGCTQASVKLHHHQLVEHMVHVVRRWRGQTVIIDYSSFWKLLDFLPCYRRTLFS 296
F L +G T + +L++H V V+RR G+ + D + KL +R L +
Sbjct: 258 FEVLATNGDTHLGGEDFDQRLMDHFVKVIRRKHGRDIAGDARALGKLRRECERAKRALSN 317
Query: 295 QESXXXXXXXXXXXXXXRTPGFRGRGDEL 209
Q P R R +EL
Sbjct: 318 QHQVRVEIESLFDGVDFSEPLSRARFEEL 346
>07_03_0366 + 17321948-17322331
Length = 127
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +1
Query: 184 RSTGGGAGEAHLHGPGNQASAARERVQRLQDA---------LQQILG*TGSVGNMGENRE 336
R +GGGA EA G + SA R L++A +LG G +G +G+N
Sbjct: 58 RGSGGGAMEAEGGGGVTEPSATRWGEAALREAGLDVWLPLGFSSLLGLLGLLGLLGQNSV 117
Query: 337 ASRRSCNR 360
S S NR
Sbjct: 118 FSVNSVNR 125
>06_02_0214 + 13141213-13143741
Length = 842
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +2
Query: 119 RSHQRTPSGSRDFKEATKRDALARLEVE-LEKLISTAPETRRPQLEKEFKGFKTLFSRFL 295
R + ++ G +F+ T+ + L+RL L LI E L E+ TL S
Sbjct: 527 RGNPKSQQGLNEFR--TEIELLSRLRHRHLVSLIGYCDERNEMILVYEYMEKGTLKSHLY 584
Query: 296 AEQGPSVTWEKIEKLPEGAVIDYNSLSTPTTDNVHH 403
PS+ W++ ++ GA + L T + + H
Sbjct: 585 GSDNPSLNWKQRLEICIGAARGLHYLHTGSAKAIIH 620
>01_01_0887 +
6978869-6979053,6979183-6979558,6979651-6979734,
6979838-6979903,6980938-6981007,6981333-6981718,
6982114-6982154,6982661-6982757
Length = 434
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -1
Query: 230 PGPWR*ASPAPPPVERGHHVW-WPP 159
PG + A P PPP ++ H W W P
Sbjct: 5 PGAFGVAPPPPPPQQQQHQPWQWQP 29
>10_05_0041 - 8469769-8470164
Length = 131
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 376 HANDGQRAPYARQVGGGEA*RRPG 447
H DG R A Q+GGG A RR G
Sbjct: 3 HGGDGARRRAAAQLGGGAAARRLG 26
>07_03_1425 + 26489446-26491425
Length = 659
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 184 RSTGGGAGEAHLHGPGNQASAARERVQRL 270
R G G H+ GP A+A RER+ +
Sbjct: 534 RPDGSGLRRVHVAGPAGSAAADRERINHV 562
>06_01_0060 + 522208-522756,522901-522912
Length = 186
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 505 GQVIPDLDHRFGALTAHGCTQASVKLHHH 419
G +I DH G L+ H A+ HHH
Sbjct: 24 GAIISSFDHAAGLLSLHDVAAAADHHHHH 52
>05_03_0612 -
16177362-16178102,16178404-16178539,16180612-16180658,
16181002-16181082,16181765-16181846,16181924-16182036,
16182349-16182456,16182531-16182642,16182738-16182847,
16183105-16183242,16183370-16183834
Length = 710
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 443 LGTSMGCKGPKSVIQVRNDLTFLDLTVQQIEHLNKTYKCNVP 568
L +G G I+V+ D+ F+D + I HL KT VP
Sbjct: 191 LAAYLGFDGWLINIEVKLDIQFIDNLKEFINHLTKTMHAAVP 232
>04_04_0774 +
27986999-27987278,27987380-27987496,27987605-27987759,
27987855-27987929,27988025-27988321,27988448-27988780,
27988880-27988996
Length = 457
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -1
Query: 485 GSPIWGPYSPWMYPGLR*ASPPPTCRAYGA 396
GSP PY W + A PPP + GA
Sbjct: 50 GSPYGSPYPRWPVCSIAKAPPPPLLQKLGA 79
>03_05_0655 + 26491238-26491696
Length = 152
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 431 LNGGLGTSMGCKGPKSVIQ 487
L GLG + CKGP V+Q
Sbjct: 117 LGSGLGLGLSCKGPGGVVQ 135
>03_01_0618 +
4543013-4543111,4544100-4544177,4544739-4544873,
4544971-4545078,4545397-4545525,4546191-4546306,
4546392-4546509,4547274-4547379,4547492-4547631,
4547735-4547905,4547984-4548094,4548206-4548317,
4548615-4548943,4549064-4549154,4549542-4549637,
4549710-4549780,4549868-4549980,4550353-4550434
Length = 734
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = -3
Query: 567 GTLHLYVLFKCSICCTVRSRKVRSFRTWITDL--GPLQPM-DVPRPPLSFTTTNLSSI 403
GTL + +CS C RS + R + DL G + + D+PR PL+ + ++S++
Sbjct: 156 GTLRQHDFRECSSCPRARSTN-QECRNVLLDLRWGAKKSLADIPRQPLALKSCDISTV 212
>02_05_0419 -
28814754-28816114,28816749-28817435,28817554-28817774,
28818536-28818750
Length = 827
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 107 DKKIRSHQRTPSGSRDFKEATKRDALARLEVELEKLIST 223
DKK S+ R PS S+ K+ +K+ +L+ +V IST
Sbjct: 719 DKKSISNVRRPSASKSQKKQSKKASLSSQKVRTLSSIST 757
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,913,376
Number of Sequences: 37544
Number of extensions: 397366
Number of successful extensions: 1570
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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