BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10i02f
(584 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical p... 161 3e-40
Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical pr... 161 3e-40
Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical pr... 161 3e-40
Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical pr... 161 3e-40
Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical pr... 161 3e-40
Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical pr... 123 1e-28
U58727-2|AAB00582.2| 462|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 36 0.021
AF047660-9|AAC04433.3| 339|Caenorhabditis elegans Hypothetical ... 31 0.46
Z77670-2|CAB01250.1| 588|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 28 4.2
U88311-1|AAB42346.1| 177|Caenorhabditis elegans Hypothetical pr... 28 4.2
AJ512335-1|CAD54509.1| 588|Caenorhabditis elegans trehalase pro... 28 4.2
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 28 4.2
U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical pr... 28 5.6
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 27 7.4
AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical ... 27 7.4
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 27 7.4
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 27 7.4
AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical ... 27 7.4
Z68338-2|CAA92759.1| 411|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical
protein K08E3.5f protein.
Length = 493
Score = 161 bits (391), Expect = 3e-40
Identities = 88/148 (59%), Positives = 105/148 (70%), Gaps = 2/148 (1%)
Frame = +2
Query: 146 SRDFKEATKRDALARLEVELEKLISTA-PETRRPQLEKEFKGFKTLFSRFLAEQGPSVTW 322
S ++K +TK +AL +E EL L+ST PET + E GF+ LF+RFL + P+V W
Sbjct: 4 SEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHN-KTELSGFRNLFARFLRAK-PTVDW 61
Query: 323 EKIEKLPEGAVIDYNSLS-TPTTDNVHHMLDKLVVVKLNGGLGTSMGCKGPKSVIQVRND 499
KIE LPEGA+ Y SL + + L KLVVVKLNGGLGTSMGCKGPKSVI VRND
Sbjct: 62 SKIEPLPEGAIRPYKSLGHVVDKELIASQLRKLVVVKLNGGLGTSMGCKGPKSVISVRND 121
Query: 500 LTFLDLTVQQIEHLNKTYKCNVPLVLMN 583
LTFLDLT+QQI+ LNKTY +VPLVLMN
Sbjct: 122 LTFLDLTMQQIQTLNKTYGVDVPLVLMN 149
>Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical
protein K08E3.5e protein.
Length = 496
Score = 161 bits (391), Expect = 3e-40
Identities = 88/148 (59%), Positives = 105/148 (70%), Gaps = 2/148 (1%)
Frame = +2
Query: 146 SRDFKEATKRDALARLEVELEKLISTA-PETRRPQLEKEFKGFKTLFSRFLAEQGPSVTW 322
S ++K +TK +AL +E EL L+ST PET + E GF+ LF+RFL + P+V W
Sbjct: 7 SEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHN-KTELSGFRNLFARFLRAK-PTVDW 64
Query: 323 EKIEKLPEGAVIDYNSLS-TPTTDNVHHMLDKLVVVKLNGGLGTSMGCKGPKSVIQVRND 499
KIE LPEGA+ Y SL + + L KLVVVKLNGGLGTSMGCKGPKSVI VRND
Sbjct: 65 SKIEPLPEGAIRPYKSLGHVVDKELIASQLRKLVVVKLNGGLGTSMGCKGPKSVISVRND 124
Query: 500 LTFLDLTVQQIEHLNKTYKCNVPLVLMN 583
LTFLDLT+QQI+ LNKTY +VPLVLMN
Sbjct: 125 LTFLDLTMQQIQTLNKTYGVDVPLVLMN 152
>Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical
protein K08E3.5c protein.
Length = 511
Score = 161 bits (391), Expect = 3e-40
Identities = 88/148 (59%), Positives = 105/148 (70%), Gaps = 2/148 (1%)
Frame = +2
Query: 146 SRDFKEATKRDALARLEVELEKLISTA-PETRRPQLEKEFKGFKTLFSRFLAEQGPSVTW 322
S ++K +TK +AL +E EL L+ST PET + E GF+ LF+RFL + P+V W
Sbjct: 22 SEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHN-KTELSGFRNLFARFLRAK-PTVDW 79
Query: 323 EKIEKLPEGAVIDYNSLS-TPTTDNVHHMLDKLVVVKLNGGLGTSMGCKGPKSVIQVRND 499
KIE LPEGA+ Y SL + + L KLVVVKLNGGLGTSMGCKGPKSVI VRND
Sbjct: 80 SKIEPLPEGAIRPYKSLGHVVDKELIASQLRKLVVVKLNGGLGTSMGCKGPKSVISVRND 139
Query: 500 LTFLDLTVQQIEHLNKTYKCNVPLVLMN 583
LTFLDLT+QQI+ LNKTY +VPLVLMN
Sbjct: 140 LTFLDLTMQQIQTLNKTYGVDVPLVLMN 167
>Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical
protein K08E3.5b protein.
Length = 522
Score = 161 bits (391), Expect = 3e-40
Identities = 88/148 (59%), Positives = 105/148 (70%), Gaps = 2/148 (1%)
Frame = +2
Query: 146 SRDFKEATKRDALARLEVELEKLISTA-PETRRPQLEKEFKGFKTLFSRFLAEQGPSVTW 322
S ++K +TK +AL +E EL L+ST PET + E GF+ LF+RFL + P+V W
Sbjct: 33 SEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHN-KTELSGFRNLFARFLRAK-PTVDW 90
Query: 323 EKIEKLPEGAVIDYNSLS-TPTTDNVHHMLDKLVVVKLNGGLGTSMGCKGPKSVIQVRND 499
KIE LPEGA+ Y SL + + L KLVVVKLNGGLGTSMGCKGPKSVI VRND
Sbjct: 91 SKIEPLPEGAIRPYKSLGHVVDKELIASQLRKLVVVKLNGGLGTSMGCKGPKSVISVRND 150
Query: 500 LTFLDLTVQQIEHLNKTYKCNVPLVLMN 583
LTFLDLT+QQI+ LNKTY +VPLVLMN
Sbjct: 151 LTFLDLTMQQIQTLNKTYGVDVPLVLMN 178
>Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical
protein K08E3.5a protein.
Length = 509
Score = 161 bits (391), Expect = 3e-40
Identities = 88/148 (59%), Positives = 105/148 (70%), Gaps = 2/148 (1%)
Frame = +2
Query: 146 SRDFKEATKRDALARLEVELEKLISTA-PETRRPQLEKEFKGFKTLFSRFLAEQGPSVTW 322
S ++K +TK +AL +E EL L+ST PET + E GF+ LF+RFL + P+V W
Sbjct: 20 SEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHN-KTELSGFRNLFARFLRAK-PTVDW 77
Query: 323 EKIEKLPEGAVIDYNSLS-TPTTDNVHHMLDKLVVVKLNGGLGTSMGCKGPKSVIQVRND 499
KIE LPEGA+ Y SL + + L KLVVVKLNGGLGTSMGCKGPKSVI VRND
Sbjct: 78 SKIEPLPEGAIRPYKSLGHVVDKELIASQLRKLVVVKLNGGLGTSMGCKGPKSVISVRND 137
Query: 500 LTFLDLTVQQIEHLNKTYKCNVPLVLMN 583
LTFLDLT+QQI+ LNKTY +VPLVLMN
Sbjct: 138 LTFLDLTMQQIQTLNKTYGVDVPLVLMN 165
>Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical
protein K08E3.5d protein.
Length = 497
Score = 123 bits (296), Expect = 1e-28
Identities = 76/147 (51%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +2
Query: 146 SRDFKEATKRDALARLEVELEKLISTA-PETRRPQLEKEFKGFKTLFSRFLAEQGPSVTW 322
S ++K +TK +AL +E EL L+ST PET + E GF+ LF+RFL + P+V W
Sbjct: 33 SEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHN-KTELSGFRNLFARFLRAK-PTVDW 90
Query: 323 EKIEKLPEGAVIDYNSLSTPTTDNVHHMLDKLVVVKLNGGLGTSMGCKGPKSVIQVRNDL 502
KIE LPEGA+ Y SL GTSMGCKGPKSVI VRNDL
Sbjct: 91 SKIEPLPEGAIRPYKSL------------------------GTSMGCKGPKSVISVRNDL 126
Query: 503 TFLDLTVQQIEHLNKTYKCNVPLVLMN 583
TFLDLT+QQI+ LNKTY +VPLVLMN
Sbjct: 127 TFLDLTMQQIQTLNKTYGVDVPLVLMN 153
>U58727-2|AAB00582.2| 462|Caenorhabditis elegans Hypothetical
protein D1005.2 protein.
Length = 462
Score = 79.4 bits (187), Expect = 2e-15
Identities = 44/132 (33%), Positives = 75/132 (56%)
Frame = +2
Query: 188 RLEVELEKLISTAPETRRPQLEKEFKGFKTLFSRFLAEQGPSVTWEKIEKLPEGAVIDYN 367
+L+ +L + P+ + + ++ K F+ L+S+FL Q + W + L E +
Sbjct: 5 QLKSKLREFFDRQPD-QSEKAHQDSKIFEVLYSQFLENQH-CIDWNSWKFLEEKHQVTLK 62
Query: 368 SLSTPTTDNVHHMLDKLVVVKLNGGLGTSMGCKGPKSVIQVRNDLTFLDLTVQQIEHLNK 547
L P + ++L+KL V+KLNGGLGT+MGC KS+++VR TF+DL V + + + +
Sbjct: 63 DLE-PFDKSRFNILNKLAVIKLNGGLGTTMGCSKAKSLVEVREGYTFMDLAVLEHQKMCE 121
Query: 548 TYKCNVPLVLMN 583
+ + PL LMN
Sbjct: 122 AHNVDTPLYLMN 133
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 35.9 bits (79), Expect = 0.021
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +2
Query: 74 HKEMKPETNDSDKKIRSHQRTPSGSRDFKE--ATKRDALARLEVELEKLISTAPETRRPQ 247
HKE K + + S ++ RS R+P GSR+ +E RD R E + ++ + E +R
Sbjct: 6 HKEHKRKRSRSKERKRSRSRSPRGSREHREHRDRDRDRERRRERDTDREKTRDREKQRDA 65
Query: 248 LEKEFKGFKTLFSRFLAEQGPSVTWEKIEKLPEGAVI 358
+K+ K KT F E+ + T E++ K+ E ++
Sbjct: 66 EKKKEKESKTAI--FEMEESRNDT-EEVMKMKEAELL 99
>AF047660-9|AAC04433.3| 339|Caenorhabditis elegans Hypothetical
protein T09A12.1 protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.46
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 77 KEMKPETNDSDKKIRSHQRTPSGSRDFKEATKRDALARLEVELEKLISTAP 229
K+ K E+N+ DKK+R +R ++ + ++ + + E+E +S AP
Sbjct: 93 KKGKKESNEEDKKMRDSERQKREKKEVPKEMRQSMMGSVFEEIEGPVSPAP 143
>Z77670-2|CAB01250.1| 588|Caenorhabditis elegans Hypothetical
protein W05E10.4 protein.
Length = 588
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 362 YNSLSTPTTDNVHHMLDKLVVVKLNGGLGTSM 457
YN+L+T + V +DK+ V GG+ TSM
Sbjct: 412 YNTLNTGKSQKVFDYMDKMGVFTYPGGIPTSM 443
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 80 EMKPETNDSDKKIRSHQRTPSGSRD-FKEATKRDALARLEVELEKLIS-TAPETRRPQLE 253
E K +T + +K +S + G ++ K+A+K+D + + ELEK S A T P+
Sbjct: 2239 ENKKDTKEGEKG-KSKDKEKDGEKEKCKDASKKDDVTSEKNELEKRASDAAAATNAPETN 2297
Query: 254 KE 259
K+
Sbjct: 2298 KD 2299
>U88311-1|AAB42346.1| 177|Caenorhabditis elegans Hypothetical
protein C10H11.7 protein.
Length = 177
Score = 28.3 bits (60), Expect = 4.2
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +2
Query: 86 KPETNDSDKKIRSHQRTPSGSRDF-KEATKRDALARLEVELEKLISTAPETRRPQLEKEF 262
KP + H R S D KE +R + + V + + + +T + K+
Sbjct: 87 KPSVGFIKSGEKVHVRVTFNSPDAGKERPERGSDNKNHVAIFHVAAGDAKTYKEAFAKKA 146
Query: 263 K-GFKTLFSRFLAEQGPSVTWEKIEKLPEGA 352
G F+R LAE G V E EK P GA
Sbjct: 147 ADGVHHFFARHLAEPGAQVDKEADEKAPNGA 177
>AJ512335-1|CAD54509.1| 588|Caenorhabditis elegans trehalase
protein.
Length = 588
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 362 YNSLSTPTTDNVHHMLDKLVVVKLNGGLGTSM 457
YN+L+T + V +DK+ V GG+ TSM
Sbjct: 412 YNTLNTGKSQKVFDYMDKMGVFTYPGGIPTSM 443
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 74 HKEMKPETNDSDKKIRSHQRTPSGSRDFKEATKRDALA 187
HKE+KP + KK+ + PSGS D+K TK D +A
Sbjct: 698 HKELKP----ASKKLHT---PPSGSLDWKTWTKPDVIA 728
>U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical
protein C09B9.3 protein.
Length = 884
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +2
Query: 71 LHKEMKPETNDSDKKIRSHQRTPSGSRDFKEATKRDALARLEV--ELEKLISTAPETRRP 244
+ KE T + K +T + + K DA+ +E ELEKL + E R
Sbjct: 470 VEKESDKNTKNKKKSSGEQNKTVKSGAENMKILKPDAVKYVEKQKELEKLNAAKKEEERM 529
Query: 245 QLEK 256
+LEK
Sbjct: 530 ELEK 533
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 95 TNDSDKKI-RSHQRTPSGSRDFKEATKRDALARLEVELEKLISTA 226
T++ DK + S G RDF +A R +++L+KLI +A
Sbjct: 1144 TSNDDKYVGTSAVELAQGLRDFTDAITEIVTVRTDIQLDKLIVSA 1188
>AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical
protein Y67H2A.2a protein.
Length = 553
Score = 27.5 bits (58), Expect = 7.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 473 WGPYSPWMYPG 441
W P+S WMYPG
Sbjct: 7 WTPFSQWMYPG 17
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 187 STGGGAGEAHLHGPGNQASAARERVQRLQDALQQI 291
S+GGG G+A G ASA+ ++ LQ+ +QQ+
Sbjct: 569 SSGGGGGQA---SSGASASASSAHMRNLQNQIQQM 600
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 95 TNDSDKKI-RSHQRTPSGSRDFKEATKRDALARLEVELEKLISTA 226
T++ DK + S G RDF +A R +++L+KLI +A
Sbjct: 1144 TSNDDKYVGTSAVELAQGLRDFTDAITEIVTVRTDIQLDKLIVSA 1188
>AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical
protein Y71H2AM.10 protein.
Length = 871
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -2
Query: 490 DLDHRFGALTAHGCTQASVKLHHHQLVEHMVHVVRRWRGQTVIIDYSS 347
DLD + ++AH + ++ + HH H++ + W V I S
Sbjct: 590 DLDSSYFEMSAHSDNERALAVSHHASKVHVIAIDENWPLPVVEISLQS 637
>Z68338-2|CAA92759.1| 411|Caenorhabditis elegans Hypothetical
protein T24B8.2 protein.
Length = 411
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 359 DYNSLSTPTTDNVHHMLDKLVVVKLNGGLGTSMGCKGPKSVIQVRNDLTFLDLTVQQIEH 538
D L+ TT N +K++ K NG + SV+ +R + LD +QQ+E
Sbjct: 182 DIGELTVGTTRNG----EKVLKFKDNGSEDPVKFTEADASVVDIRKAMNKLDREIQQLEQ 237
Query: 539 LNKTY 553
K Y
Sbjct: 238 KVKKY 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,544,392
Number of Sequences: 27780
Number of extensions: 295773
Number of successful extensions: 1041
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -